RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W SPO24Q3E752 67 aa2.06□□□□□ -2.08
RRP6YOR001W TDH1P00360 332 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W MDM10P18409 493 aa2.05□□□□□ -2.08
RRP6YOR001W SAR1P20606 190 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W AIM17P23180 465 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W YCL068CP25593 260 aa2.05□□□□□ -2.08
RRP6YOR001W EFB1P32471 206 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W VAM7P32912 316 aa2.05□□□□□ -2.08
RRP6YOR001W TPO5P36029 618 aa2.05□□□□□ -2.08
RRP6YOR001W ALP1P38971 573 aa2.05□□□□□ -2.08
RRP6YOR001W ISC1P40015 477 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W PCL6P40038 420 aa2.05□□□□□ -2.08
RRP6YOR001W YER079WP40052 210 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W SCC4P40090 624 aa2.05□□□□□ -2.08
RRP6YOR001W HMS2P47175 358 aa2.05□□□□□ -2.08
RRP6YOR001W PHB2P50085 310 aa2.05□□□□□ -2.08
RRP6YOR001W VOA1P53262 265 aa2.05□□□□□ -2.08
RRP6YOR001W YNL181WP53878 407 aa2.05□□□□□ -2.08
RRP6YOR001W BET4Q00618 327 aa2.05□□□□□ -2.08
RRP6YOR001W PNG1Q02890 363 aa2.05□□□□□ -2.08
RRP6YOR001W TLG1Q03322 224 aa2.05□□□□□ -2.08
RRP6YOR001W CWC21Q03375 135 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W GLO2Q05584 274 aa2.05□□□□□ -2.08
RRP6YOR001W ECI1Q05871 280 aa2.05□□□□□ -2.08
RRP6YOR001W NRT1Q08485 598 aa2.05□□□□□ -2.08
RRP6YOR001W YDL009CQ12210 107 aa2.05□□□□□ -2.08
RRP6YOR001W ARF1P11076 181 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W HOM2P13663 365 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W PET123P17558 318 aa2.05□□□□□ -2.08
RRP6YOR001W EXO70P19658 623 aa2.05□□□□□ -2.08
RRP6YOR001W MEK1P24719 497 aaPredicted RBP2.05□□□□□ -2.08
RRP6YOR001W RNA14P25298 677 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W LSB5P25369 354 aa2.05□□□□□ -2.08
RRP6YOR001W BUD2P33314 1104 aa2.05□□□□□ -2.08
RRP6YOR001W SKN1P33336 771 aa2.05□□□□□ -2.08
RRP6YOR001W SIP2P34164 415 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W FRE2P36033 711 aa2.05□□□□□ -2.08
RRP6YOR001W RIM2P38127 377 aa2.05□□□□□ -2.08
RRP6YOR001W PEX32P38292 413 aa2.05□□□□□ -2.08
RRP6YOR001W TIF5P38431 405 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W SBE22P38814 852 aa2.05□□□□□ -2.08
RRP6YOR001W PRP39P39682 629 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W HAT2P39984 401 aa2.05□□□□□ -2.08
RRP6YOR001W VRG4P40107 337 aa2.05□□□□□ -2.08
RRP6YOR001W GCN20P43535 752 aaKnown RBP2.05□□□□□ -2.08
RRP6YOR001W SNO3P43544 222 aa2.05□□□□□ -2.08
RRP6YOR001W GWT1P47026 490 aa2.05□□□□□ -2.08
RRP6YOR001W YHC3P47040 408 aa2.05□□□□□ -2.08
RRP6YOR001W MND1P53102 219 aa2.05□□□□□ -2.08
RRP6YOR001W YNR048WP53740 393 aa2.05□□□□□ -2.08
RRP6YOR001W FRE4P53746 719 aa2.05□□□□□ -2.08
RRP6YOR001W YNL146WP53906 100 aa2.05□□□□□ -2.08
RRP6YOR001W MPS1P54199 764 aa2.05□□□□□ -2.08
RRP6YOR001W RSN1Q03516 953 aa2.05□□□□□ -2.08
RRP6YOR001W AIM33Q04516 312 aa2.05□□□□□ -2.08
RRP6YOR001W BOP2Q06150 570 aa2.05□□□□□ -2.08
RRP6YOR001W ASA1Q06822 443 aa2.05□□□□□ -2.08
RRP6YOR001W MRS3P10566 314 aa2.04□□□□□ -2.08
RRP6YOR001W YPS1P32329 569 aa2.04□□□□□ -2.08
RRP6YOR001W ERG1P32476 496 aaKnown RBP2.04□□□□□ -2.08
RRP6YOR001W PPZ2P33329 710 aa2.04□□□□□ -2.08
RRP6YOR001W LOS1P33418 1100 aaPredicted RBP2.04□□□□□ -2.08
RRP6YOR001W YPT53P36019 220 aa2.04□□□□□ -2.08
RRP6YOR001W YBR137WP38276 179 aa2.04□□□□□ -2.08
RRP6YOR001W FLO5P38894 1075 aa2.04□□□□□ -2.08
RRP6YOR001W LYS1P38998 373 aaRIP-Chip data2.04□□□□□ -2.08not detected
RRP6YOR001W END3P39013 349 aa2.04□□□□□ -2.08
RRP6YOR001W LYS12P40495 371 aaKnown RBP2.04□□□□□ -2.08
RRP6YOR001W BIO3P50277 480 aa2.04□□□□□ -2.08
RRP6YOR001W TDA7P53882 636 aaPredicted RBP2.04□□□□□ -2.08
RRP6YOR001W YPL068CQ02749 293 aa2.04□□□□□ -2.08
RRP6YOR001W RPM2Q02773 1202 aa2.04□□□□□ -2.08
RRP6YOR001W ODC1Q03028 310 aa2.04□□□□□ -2.08
RRP6YOR001W YML122CQ03207 126 aa2.04□□□□□ -2.08
RRP6YOR001W MRPL51Q06090 140 aaPredicted RBP2.04□□□□□ -2.08
RRP6YOR001W REX4Q08237 289 aa2.04□□□□□ -2.08
RRP6YOR001W PAA1Q12447 191 aaKnown RBP2.04□□□□□ -2.08
RRP6YOR001W FSH3Q99369 266 aa2.04□□□□□ -2.08
RRP6YOR001W PGK1P00560 416 aaKnown RBP2.03□□□□□ -2.08
RRP6YOR001W ARG4P04076 463 aaPredicted RBP2.03□□□□□ -2.08
RRP6YOR001W TUB1P09733 447 aaKnown RBP2.03□□□□□ -2.08
RRP6YOR001W FAR1P21268 830 aa2.03□□□□□ -2.08
RRP6YOR001W SLM5P25345 492 aaKnown RBP2.03□□□□□ -2.08
RRP6YOR001W YUR1P26725 428 aa2.03□□□□□ -2.08
RRP6YOR001W SKT5P34226 696 aa2.03□□□□□ -2.08
RRP6YOR001W MMF1P40185 145 aaKnown RBP2.03□□□□□ -2.08
RRP6YOR001W SNL1P40548 159 aa2.03□□□□□ -2.08
RRP6YOR001W TOS3P43637 560 aa2.03□□□□□ -2.08
RRP6YOR001W MPP6P53725 186 aaPredicted RBP2.03□□□□□ -2.08
RRP6YOR001W YNL234WP53857 426 aa2.03□□□□□ -2.08
RRP6YOR001W LDS2Q08218 356 aa2.03□□□□□ -2.08
RRP6YOR001W ATX2Q12067 313 aa2.03□□□□□ -2.08
RRP6YOR001W QCR6P00127 147 aa2.03□□□□□ -2.08
RRP6YOR001W PAB1P04147 577 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
RRP6YOR001W HEM2P05373 342 aa2.03□□□□□ -2.08
RRP6YOR001W CAR2P07991 424 aaKnown RBP2.03□□□□□ -2.08
RRP6YOR001W HNM1P19807 563 aa2.03□□□□□ -2.08
RRP6YOR001W CKI1P20485 582 aa2.03□□□□□ -2.08
RRP6YOR001W YCR100CP25606 316 aa2.03□□□□□ -2.08
RRP6YOR001W TIP1P27654 210 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms