RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	NKP1	Q12493	238 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	YJR112W-A	Q3E743	109 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	SUC2	P00724	532 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	KAR3	P17119	729 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	AGA1	P32323	725 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	SPR1	P32603	445 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	SOR1	P35497	357 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	SRB7	P47822	140 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	YGR149W	P48236	432 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	YIP5	P53108	310 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	MAL13	P53338	473 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	NGL3	Q03210	505 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	SHS1	Q07657	551 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	YEH2	Q07950	538 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	SLD7	Q08457	257 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	KGD1	P20967	1014 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	CPR3	P25719	182 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	YIM1	P28625	365 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	RME1	P32338	300 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	SGE1	P33335	543 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	MTR2	P34232	184 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	TCD2	P36101	447 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	PIM1	P36775	1133 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	NOP4	P37838	685 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	YBR062C	P38239	180 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	TSC10	P38342	320 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	YPI1	P43587	155 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	CUE3	P53137	624 aa	Known RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	GIM3	P53900	129 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	TDA1	Q03533	586 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	TMC1	Q08422	150 aa	Predicted RBP	0.91	□□□□□ -2.26
PRP16	YKR086W	RLM1	Q12224	676 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	AYT1	Q12226	474 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	RRD2	Q12461	358 aa		0.91	□□□□□ -2.26
PRP16	YKR086W	PUT2	P07275	575 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	GLK1	P17709	500 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	TYR1	P20049	452 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	RAD14	P28519	371 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	HXT1	P32465	570 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	SIP2	P34164	415 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	COS9	P36034	407 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	PMU1	P36069	295 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	MRPL37	P36532	105 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	PCH2	P38126	564 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	UIP3	P39547	235 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	YER079W	P40052	210 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	YMR147W	P40218	223 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	SEC28	P40509	296 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	DIM1	P41819	318 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	SGM1	P47166	707 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	AAD10	P47182	288 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	APT1	P49435	187 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	RSC1	P53236	928 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	RHO4	Q00246	291 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	TOF2	Q02208	771 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	FIN1	Q03898	291 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	ATC1	Q04005	294 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	RNH1	Q04740	348 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	DCS1	Q06151	350 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	VPS74	Q06385	345 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	PHO92	Q06390	306 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	POM33	Q12164	279 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	EAF3	Q12432	401 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	FRE6	Q12473	712 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	ARP6	Q12509	438 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	SEY1	Q99287	776 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	SPS4	P09937	338 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	PEP5	P12868	1029 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	MCK1	P21965	375 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	ELO2	P25358	347 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	LDB16	P25587	256 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	BEM1	P29366	551 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	ATP11	P32453	318 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	TOA1	P32773	286 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	SKG6	P32900	734 aa	Predicted RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	PMT1	P33775	817 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	DUG2	P38149	878 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	HSM3	P38348	480 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	PTH1	P38876	190 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	MDM31	P38880	579 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	FAA2	P39518	744 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	RPH1	P39956	796 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	IDP2	P41939	412 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	HXT14	P42833	540 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	ROK1	P45818	564 aa	Predicted RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.27	RIP-Chip
PRP16	YKR086W	RTT101	P47050	842 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	MPP6	P53725	186 aa	Predicted RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	TIM10	P87108	93 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	SPR6	Q01684	191 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	DBP9	Q06218	594 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	TSR1	Q07381	788 aa	Known RBP	0.9	□□□□□ -2.27
PRP16	YKR086W	YPL278C	Q08990	100 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	NFI1	Q12216	726 aa		0.9	□□□□□ -2.27
PRP16	YKR086W	SOD1	P00445	154 aa	Known RBP	0.89	□□□□□ -2.27
PRP16	YKR086W	HHF1	P02309	103 aa	Known RBP	0.89	□□□□□ -2.27
PRP16	YKR086W	GPH1	P06738	902 aa	Known RBP	0.89	□□□□□ -2.27
PRP16	YKR086W	GAL3	P13045	520 aa		0.89	□□□□□ -2.27
PRP16	YKR086W	PMR1	P13586	950 aa		0.89	□□□□□ -2.27
PRP16	YKR086W	SNA3	P14359	133 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms