RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C GRX5Q02784 150 aa3.39□□□□□ -1.87
SSM4YIL030C TIF35Q04067 274 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C YMR087WQ04299 284 aa3.39□□□□□ -1.87
SSM4YIL030C RRP45Q05636 305 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C LYS21Q12122 440 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C RAD59Q12223 238 aa3.39□□□□□ -1.87
SSM4YIL030C SNU23Q12368 194 aaPredicted RBP3.39□□□□□ -1.87
SSM4YIL030C YCL012CQ8J0M4 134 aa3.39□□□□□ -1.87
SSM4YIL030C Q0010Q9ZZX9 128 aa3.39□□□□□ -1.87
SSM4YIL030C CAR2P07991 424 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C YAR066WP0CX18 203 aa3.39□□□□□ -1.87
SSM4YIL030C YHR214WP0CX19 203 aa3.39□□□□□ -1.87
SSM4YIL030C SLY41P22215 453 aa3.39□□□□□ -1.87
SSM4YIL030C PEP12P32854 288 aa3.39□□□□□ -1.87
SSM4YIL030C GCS1P35197 352 aa3.39□□□□□ -1.87
SSM4YIL030C ATP3P38077 311 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C YHR202WP38887 602 aa3.39□□□□□ -1.87
SSM4YIL030C OCA2P53949 197 aa3.39□□□□□ -1.87
SSM4YIL030C YML083CQ04526 418 aa3.39□□□□□ -1.87
SSM4YIL030C KEI1Q06346 221 aa3.39□□□□□ -1.87
SSM4YIL030C RRP9Q06506 573 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C FRE3Q08905 711 aa3.39□□□□□ -1.87
SSM4YIL030C ATG41Q12048 136 aa3.39□□□□□ -1.87
SSM4YIL030C ATG31Q12421 196 aa3.39□□□□□ -1.87
SSM4YIL030C UNG1P12887 359 aa3.39□□□□□ -1.87
SSM4YIL030C APA1P16550 321 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C RTG2P32608 588 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C AIM46P38885 310 aa3.39□□□□□ -1.87
SSM4YIL030C PRM10P42946 383 aa3.39□□□□□ -1.87
SSM4YIL030C RET2P43621 546 aa3.39□□□□□ -1.87
SSM4YIL030C PSP2P50109 593 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C HST3P53687 447 aa3.39□□□□□ -1.87
SSM4YIL030C ASM4Q05166 528 aa3.39□□□□□ -1.87
SSM4YIL030C CLP1Q08685 445 aaPredicted RBP3.39□□□□□ -1.87
SSM4YIL030C AIM45Q12480 344 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C VPS13Q07878 3144 aa3.39□□□□□ -1.87
SSM4YIL030C GCN4P03069 281 aa3.38□□□□□ -1.87
SSM4YIL030C CLN2P20438 545 aa3.38□□□□□ -1.87
SSM4YIL030C SNC1P31109 117 aa3.38□□□□□ -1.87
SSM4YIL030C MCM10P32354 571 aa3.38□□□□□ -1.87
SSM4YIL030C YKL162CP36052 402 aa3.38□□□□□ -1.87
SSM4YIL030C CBR1P38626 284 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C BIG1P38813 335 aa3.38□□□□□ -1.87
SSM4YIL030C NVJ1P38881 321 aa3.38□□□□□ -1.87
SSM4YIL030C PHM8P40025 321 aa3.38□□□□□ -1.87
SSM4YIL030C SWC4P53201 476 aa3.38□□□□□ -1.87
SSM4YIL030C PAU12P53343 120 aa3.38□□□□□ -1.87
SSM4YIL030C RAD34Q06665 692 aa3.38□□□□□ -1.87
SSM4YIL030C RBD2Q12270 262 aa3.38□□□□□ -1.87
SSM4YIL030C Q0142Q9ZZW4 58 aa3.38□□□□□ -1.87
SSM4YIL030C RPS9AO13516 197 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C MET16P18408 261 aaPredicted RBP3.38□□□□□ -1.87
SSM4YIL030C DBF2P22204 572 aa3.38□□□□□ -1.87
SSM4YIL030C SIS1P25294 352 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C DOA4P32571 926 aa3.38□□□□□ -1.87
SSM4YIL030C CAT2P32796 670 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C IRS4P36115 615 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C TIF11P38912 153 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C PFS2P42841 465 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C MRPL13Q02204 264 aa3.38□□□□□ -1.87
SSM4YIL030C PEX12Q04370 399 aa3.38□□□□□ -1.87
SSM4YIL030C PUN1Q06991 263 aa3.38□□□□□ -1.87
SSM4YIL030C SIR3P06701 978 aa3.38□□□□□ -1.87
SSM4YIL030C YEF1P32622 495 aa3.38□□□□□ -1.87
SSM4YIL030C LNP1P38878 278 aa3.38□□□□□ -1.87
SSM4YIL030C COG3P40094 801 aa3.38□□□□□ -1.87
SSM4YIL030C UBC9P50623 157 aaPredicted RBP3.38□□□□□ -1.87
SSM4YIL030C YGL204CP53089 101 aa3.38□□□□□ -1.87
SSM4YIL030C ATF2P53296 535 aa3.38□□□□□ -1.87
SSM4YIL030C MFB1Q04922 465 aa3.38□□□□□ -1.87
SSM4YIL030C MLC2Q06580 163 aa3.38□□□□□ -1.87
SSM4YIL030C TSR2Q06672 205 aaKnown RBP3.38□□□□□ -1.87
SSM4YIL030C HUA2Q12134 243 aa3.38□□□□□ -1.87
SSM4YIL030C SEM1O94742 89 aa3.37□□□□□ -1.87
SSM4YIL030C SNF6P18888 332 aa3.37□□□□□ -1.87
SSM4YIL030C SEC22P22214 214 aa3.37□□□□□ -1.87
SSM4YIL030C SRO77P38163 1010 aa3.37□□□□□ -1.87
SSM4YIL030C RPP1P38786 293 aa3.37□□□□□ -1.87
SSM4YIL030C YNL034WP53963 612 aa3.37□□□□□ -1.87
SSM4YIL030C TPS1Q00764 495 aaKnown RBP3.37□□□□□ -1.87
SSM4YIL030C YMR130WQ04223 302 aa3.37□□□□□ -1.87
SSM4YIL030C RNH202Q05635 350 aa3.37□□□□□ -1.87
SSM4YIL030C SYC1Q08553 188 aaPredicted RBP3.37□□□□□ -1.87
SSM4YIL030C NDD1Q08887 554 aa3.37□□□□□ -1.87
SSM4YIL030C BMT6Q12291 365 aa3.37□□□□□ -1.87
SSM4YIL030C VMA9Q3E7B6 73 aa3.37□□□□□ -1.87
SSM4YIL030C PET494P07390 489 aaPredicted RBP3.37□□□□□ -1.87
SSM4YIL030C MRPL8P22353 238 aa3.37□□□□□ -1.87
SSM4YIL030C BUB3P26449 341 aa3.37□□□□□ -1.87
SSM4YIL030C SFA1P32771 386 aa3.37□□□□□ -1.87
SSM4YIL030C SEC61P32915 480 aa3.37□□□□□ -1.87
SSM4YIL030C SLI15P38283 698 aa3.37□□□□□ -1.87
SSM4YIL030C LEU5P38702 357 aa3.37□□□□□ -1.87
SSM4YIL030C IKI1P38874 309 aa3.37□□□□□ -1.87
SSM4YIL030C AFG3P39925 761 aa3.37□□□□□ -1.87
SSM4YIL030C RPS7BP48164 190 aaKnown RBP3.37□□□□□ -1.87
SSM4YIL030C CTR3Q06686 241 aa3.37□□□□□ -1.87
SSM4YIL030C COS7Q07788 383 aa3.37□□□□□ -1.87
SSM4YIL030C UBX3Q12229 455 aa3.37□□□□□ -1.87
SSM4YIL030C SIR2P06700 562 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 122.7 ms