RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	ITR1	P30605	584 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	HOT13	P36078	116 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	MMS21	P38632	267 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	INM1	P38710	295 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	YHR122W	P38829	231 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	TFG2	P41896	400 aa	Predicted RBP	4.93	□□□□□ -1.62
SKI6	YGR195W	MRX5	P47007	382 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	MRPL50	P53724	139 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	SLT2	Q00772	484 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	RSM23	Q01163	450 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	SHR3	Q02774	210 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	TRM732	Q03496	1420 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	PLM2	Q04383	521 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	YLR283W	Q05867	314 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	YDL057W	Q07379	328 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	LOT6	Q07923	191 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	THP1	Q08231	455 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	DNL4	Q08387	944 aa	Predicted RBP	4.93	□□□□□ -1.62
SKI6	YGR195W	YPR1	Q12458	312 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	RGS2	Q99188	309 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	PGK1	P00560	416 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	ATP10	P18496	279 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	COQ1	P18900	473 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	CIN8	P27895	1000 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	PPA2	P28239	310 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	CWP1	P28319	239 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	HXT1	P32465	570 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	CYS4	P32582	507 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	IMP3	P32899	183 aa	Predicted RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	KDX1	P36005	433 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	AIM29	P36154	155 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	IML3	P38265	245 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	UTP25	P40498	721 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	TDA10	P42938	290 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	STE24	P47154	453 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	ZPR1	P53303	486 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	YNL092W	P53934	400 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	RLI1	Q03195	608 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	COX20	Q04935	205 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	YMR226C	Q05016	267 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	MDM30	Q05930	598 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	YOL075C	Q08234	1294 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	SLF1	Q12034	447 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	FRE7	Q12333	620 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	ATG31	Q12421	196 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	RRP12	Q12754	1228 aa	Known RBP	4.92	□□□□□ -1.62
SKI6	YGR195W	NUP170	P38181	1502 aa		4.92	□□□□□ -1.62
SKI6	YGR195W	BUD4	P47136	1447 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	TDH2	P00358	332 aa	Known RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SKI6	YGR195W	MRP2	P10663	115 aa	Predicted RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	PRP16	P15938	1071 aa	Predicted RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	MSK1	P32048	576 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	MSS51	P32335	436 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	GDA1	P32621	518 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	RGT1	P32862	1170 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	SOR1	P35497	357 aa	Known RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	CBP4	P37267	147 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	RFC4	P40339	323 aa	Known RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SKI6	YGR195W	HIT1	P46973	164 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	YJL118W	P47022	219 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	YJR011C	P47086	261 aa	Predicted RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	HAM1	P47119	197 aa	Known RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	HSH155	P49955	971 aa	Known RBP	4.91	□□□□□ -1.62
SKI6	YGR195W	KAP114	P53067	1004 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	SPP2	Q02521	185 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	RIM13	Q03792	727 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	SOR2	Q07786	357 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	PAM18	Q07914	168 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	YOL159C	Q08300	171 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	GEP3	Q08622	556 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	YBL111C	Q3E7Y5	667 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	LAG2	Q92325	660 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	YOR1	P53049	1477 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	DNA2	P38859	1522 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	BPT1	P14772	1559 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	ATG2	P53855	1592 aa		4.91	□□□□□ -1.62
SKI6	YGR195W	SPP41	P38904	1435 aa		4.9	□□□□□ -1.62
SKI6	YGR195W	PEP4	P07267	405 aa	Known RBP	4.9	□□□□□ -1.63
SKI6	YGR195W	POL30	P15873	258 aa	Known RBP	4.9	□□□□□ -1.63
SKI6	YGR195W	GPI12	P23797	304 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	RPL24B	P24000	155 aa	Known RBP	4.9	□□□□□ -1.63
SKI6	YGR195W	YCP4	P25349	247 aa	Known RBP	4.9	□□□□□ -1.63
SKI6	YGR195W	PBN1	P25580	416 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	PTC6	P25646	442 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	PRP21	P32524	280 aa	Predicted RBP	4.9	□□□□□ -1.63
SKI6	YGR195W	BNA4	P38169	460 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	ANS1	P38832	159 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	FET3	P38993	636 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	MTW1	P39731	289 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	POP1	P41812	875 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	YJL043W	P47053	257 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	LIF1	P53150	421 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	BET4	Q00618	327 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	BUR2	Q05949	395 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	GMC2	Q06201	188 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	UBA3	Q99344	299 aa		4.9	□□□□□ -1.63
SKI6	YGR195W	SEC3	P33332	1336 aa	Known RBP	4.9	□□□□□ -1.63
SKI6	YGR195W	GDH1	P07262	454 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms