RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W HSP104P31539 908 aaKnown RBP3.32□□□□□ -1.88
PTI1YGR156W ERG1P32476 496 aaKnown RBP3.32□□□□□ -1.88
PTI1YGR156W RRP4P38792 359 aaKnown RBP3.32□□□□□ -1.88
PTI1YGR156W VPS52P39904 641 aa3.32□□□□□ -1.88
PTI1YGR156W ASN2P49090 572 aaKnown RBP3.32□□□□□ -1.88
PTI1YGR156W TDA7P53882 636 aaPredicted RBP3.32□□□□□ -1.88
PTI1YGR156W IMP4P53941 290 aaKnown RBP3.32□□□□□ -1.88
PTI1YGR156W RLI1Q03195 608 aaKnown RBP3.32□□□□□ -1.88
PTI1YGR156W SMA2Q04658 369 aa3.32□□□□□ -1.88
PTI1YGR156W YEH2Q07950 538 aa3.32□□□□□ -1.88
PTI1YGR156W NBL1Q3E7Y6 73 aa3.32□□□□□ -1.88
PTI1YGR156W PRO3P32263 286 aaKnown RBP3.31□□□□□ -1.88
PTI1YGR156W NDI1P32340 513 aa3.31□□□□□ -1.88
PTI1YGR156W APE2P32454 952 aaKnown RBP3.31□□□□□ -1.88
PTI1YGR156W SIP2P34164 415 aaKnown RBP3.31□□□□□ -1.88
PTI1YGR156W STP2P38704 541 aa3.31□□□□□ -1.88
PTI1YGR156W HAT2P39984 401 aa3.31□□□□□ -1.88
PTI1YGR156W GCD10P41814 478 aa3.31□□□□□ -1.88
PTI1YGR156W YIP1P53039 248 aa3.31□□□□□ -1.88
PTI1YGR156W YNR068CP53754 272 aa3.31□□□□□ -1.88
PTI1YGR156W DSL1P53847 754 aa3.31□□□□□ -1.88
PTI1YGR156W YNL143CP53908 130 aa3.31□□□□□ -1.88
PTI1YGR156W GPI15P53961 229 aa3.31□□□□□ -1.88
PTI1YGR156W IRC15Q02733 499 aa3.31□□□□□ -1.88
PTI1YGR156W VPS74Q06385 345 aa3.31□□□□□ -1.88
PTI1YGR156W SKI7Q08491 747 aaPredicted RBP3.31□□□□□ -1.88
PTI1YGR156W ATG34Q12292 412 aa3.31□□□□□ -1.88
PTI1YGR156W YDR061WQ12298 539 aa3.31□□□□□ -1.88
PTI1YGR156W SRN2Q99176 213 aa3.31□□□□□ -1.88
PTI1YGR156W URB1P34241 1764 aaKnown RBP3.3□□□□□ -1.88
PTI1YGR156W MHP1P43638 1398 aa3.3□□□□□ -1.88
PTI1YGR156W POM152P39685 1337 aa3.3□□□□□ -1.88
PTI1YGR156W CHS1P08004 1131 aa3.3□□□□□ -1.88
PTI1YGR156W GLN3P18494 730 aa3.3□□□□□ -1.88
PTI1YGR156W SEC62P21825 274 aa3.3□□□□□ -1.88
PTI1YGR156W RPI1P23250 407 aaKnown RBP3.3□□□□□ -1.88
PTI1YGR156W SEC1P30619 724 aaKnown RBP3.3□□□□□ -1.88
PTI1YGR156W CRM1P30822 1084 aaKnown RBP3.3□□□□□ -1.88
PTI1YGR156W ELP2P42935 788 aa3.3□□□□□ -1.88
PTI1YGR156W GPI8P49018 411 aa3.3□□□□□ -1.88
PTI1YGR156W PCP1P53259 346 aa3.3□□□□□ -1.88
PTI1YGR156W YIF1P53845 314 aaKnown RBP3.3□□□□□ -1.88
PTI1YGR156W PNG1Q02890 363 aa3.3□□□□□ -1.88
PTI1YGR156W GIP3Q03016 1276 aa3.3□□□□□ -1.88
PTI1YGR156W RSA1Q08932 381 aa3.3□□□□□ -1.88
PTI1YGR156W PDE2P06776 526 aa3.29□□□□□ -1.88
PTI1YGR156W NFT1P0CE68 1218 aa3.29□□□□□ -1.88
PTI1YGR156W IMA3P0CW40 589 aa3.29□□□□□ -1.88
PTI1YGR156W IMA4P0CW41 589 aa3.29□□□□□ -1.88
PTI1YGR156W YCR022CP25620 114 aa3.29□□□□□ -1.88
PTI1YGR156W PHO91P27514 894 aa3.29□□□□□ -1.88
PTI1YGR156W NRP1P32770 719 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
PTI1YGR156W TRS65P32893 560 aa3.29□□□□□ -1.88
PTI1YGR156W QDR3P38227 689 aa3.29□□□□□ -1.88
PTI1YGR156W INM1P38710 295 aa3.29□□□□□ -1.88
PTI1YGR156W LYS1P38998 373 aaRIP-Chip data3.29□□□□□ -1.88not detected
PTI1YGR156W ISC1P40015 477 aaKnown RBP3.29□□□□□ -1.88
PTI1YGR156W AZF1P41696 914 aa3.29□□□□□ -1.88
PTI1YGR156W DIM1P41819 318 aaKnown RBP3.29□□□□□ -1.88
PTI1YGR156W RRT5P43607 289 aa3.29□□□□□ -1.88
PTI1YGR156W RPA34P47006 233 aaPredicted RBP3.29□□□□□ -1.88
PTI1YGR156W GWT1P47026 490 aa3.29□□□□□ -1.88
PTI1YGR156W YIP5P53108 310 aa3.29□□□□□ -1.88
PTI1YGR156W ROG1P53118 685 aa3.29□□□□□ -1.88
PTI1YGR156W ODC1Q03028 310 aa3.29□□□□□ -1.88
PTI1YGR156W PRP3Q03338 469 aaPredicted RBP3.29□□□□□ -1.88
PTI1YGR156W IMA2Q08295 589 aa3.29□□□□□ -1.88
PTI1YGR156W RNH203Q12338 110 aa3.29□□□□□ -1.88
PTI1YGR156W SIR4P11978 1358 aa3.28□□□□□ -1.88
PTI1YGR156W MRS3P10566 314 aa3.28□□□□□ -1.88
PTI1YGR156W SCH9P11792 824 aaKnown RBP3.28□□□□□ -1.88
PTI1YGR156W TAL1P15019 335 aaKnown RBP3.28□□□□□ -1.88
PTI1YGR156W RAD57P25301 460 aa3.28□□□□□ -1.88
PTI1YGR156W LSB5P25369 354 aa3.28□□□□□ -1.88
PTI1YGR156W YCR100CP25606 316 aa3.28□□□□□ -1.88
PTI1YGR156W ITR1P30605 584 aa3.28□□□□□ -1.88
PTI1YGR156W YSC83P32792 385 aa3.28□□□□□ -1.88
PTI1YGR156W SUR1P33300 382 aa3.28□□□□□ -1.88
PTI1YGR156W FRE2P36033 711 aa3.28□□□□□ -1.88
PTI1YGR156W YCR041WP37265 110 aa3.28□□□□□ -1.88
PTI1YGR156W MSG5P38590 489 aa3.28□□□□□ -1.88
PTI1YGR156W BRO1P48582 844 aa3.28□□□□□ -1.88
PTI1YGR156W PMT5P52867 743 aa3.28□□□□□ -1.88
PTI1YGR156W CUE3P53137 624 aaKnown RBP3.28□□□□□ -1.88
PTI1YGR156W YGL082WP53155 381 aa3.28□□□□□ -1.88
PTI1YGR156W PIB2P53191 635 aa3.28□□□□□ -1.88
PTI1YGR156W YNR048WP53740 393 aa3.28□□□□□ -1.88
PTI1YGR156W URC2Q04411 772 aa3.28□□□□□ -1.88
PTI1YGR156W SGT1Q08446 395 aa3.28□□□□□ -1.88
PTI1YGR156W SRL2Q12020 392 aa3.28□□□□□ -1.88
PTI1YGR156W STF1P01098 86 aa3.27□□□□□ -1.89
PTI1YGR156W RPL12AP0CX53 165 aaKnown RBP3.27□□□□□ -1.89
PTI1YGR156W RPL12BP0CX54 165 aa3.27□□□□□ -1.89
PTI1YGR156W SPO12P17123 173 aa3.27□□□□□ -1.89
PTI1YGR156W RNA14P25298 677 aaKnown RBP3.27□□□□□ -1.89
PTI1YGR156W TIP1P27654 210 aaPredicted RBP3.27□□□□□ -1.89
PTI1YGR156W CYS4P32582 507 aaKnown RBP3.27□□□□□ -1.89
PTI1YGR156W GLC7P32598 312 aaKnown RBP3.27□□□□□ -1.89
PTI1YGR156W LOS1P33418 1100 aaPredicted RBP3.27□□□□□ -1.89
PTI1YGR156W SRB2P34162 210 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms