RNA–Protein interactions for RNA: YER022W

SRB4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB4, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB4	YER022W	AIM45	Q12480	344 aa	Known RBP	2.64	□□□□□ -1.99
SRB4	YER022W	NBL1	Q3E7Y6	73 aa		2.64	□□□□□ -1.99
SRB4	YER022W	RPS16A	P0CX51	143 aa	Known RBP	2.63	□□□□□ -1.99
SRB4	YER022W	RPS16B	P0CX52	143 aa	Known RBP	2.63	□□□□□ -1.99
SRB4	YER022W	AGA1	P32323	725 aa		2.63	□□□□□ -1.99
SRB4	YER022W	OSW5	P40219	148 aa		2.63	□□□□□ -1.99
SRB4	YER022W	WSC2	P53832	503 aa		2.63	□□□□□ -1.99
SRB4	YER022W	YMR181C	Q03231	154 aa		2.63	□□□□□ -1.99
SRB4	YER022W	MGR3	Q04472	501 aa		2.63	□□□□□ -1.99
SRB4	YER022W	NDD1	Q08887	554 aa		2.63	□□□□□ -1.99
SRB4	YER022W	YPL199C	Q08954	240 aa		2.63	□□□□□ -1.99
SRB4	YER022W	TMT1	P32643	299 aa		2.62	□□□□□ -1.99
SRB4	YER022W	KKQ8	P36004	724 aa		2.62	□□□□□ -1.99
SRB4	YER022W	YBR139W	P38109	508 aa		2.62	□□□□□ -1.99
SRB4	YER022W	KAP104	P38217	918 aa	Known RBP	2.62	□□□□□ -1.99
SRB4	YER022W	LIN1	P38852	340 aa	Predicted RBP	2.62	□□□□□ -1.99
SRB4	YER022W	TOS3	P43637	560 aa		2.62	□□□□□ -1.99
SRB4	YER022W	LSC1	P53598	329 aa	Known RBP	2.62	□□□□□ -1.99
SRB4	YER022W	CAF40	P53829	373 aa		2.62	□□□□□ -1.99
SRB4	YER022W	SMA2	Q04658	369 aa		2.62	□□□□□ -1.99
SRB4	YER022W	BCH1	Q05029	724 aa		2.62	□□□□□ -1.99
SRB4	YER022W	STE23	Q06010	1027 aa		2.62	□□□□□ -1.99
SRB4	YER022W	ASA1	Q06822	443 aa		2.62	□□□□□ -1.99
SRB4	YER022W	TPT1	Q12272	230 aa	Known RBP	2.62	□□□□□ -1.99
SRB4	YER022W	SSC1	P0CS90	654 aa	Known RBP	2.62	□□□□□ -1.99
SRB4	YER022W	SRB2	P34162	210 aa		2.62	□□□□□ -1.99
SRB4	YER022W	RIB5	P38145	238 aa		2.62	□□□□□ -1.99
SRB4	YER022W	TIF5	P38431	405 aa	Known RBP	2.62	□□□□□ -1.99
SRB4	YER022W	JLP2	P40206	208 aa		2.62	□□□□□ -1.99
SRB4	YER022W	YIL089W	P40500	205 aa		2.62	□□□□□ -1.99
SRB4	YER022W	SAD1	P43589	448 aa		2.62	□□□□□ -1.99
SRB4	YER022W	SFH5	P47008	294 aa		2.62	□□□□□ -1.99
SRB4	YER022W	SSN8	P47821	323 aa		2.62	□□□□□ -1.99
SRB4	YER022W	AAD15	Q08361	143 aa		2.62	□□□□□ -1.99
SRB4	YER022W	STF1	P01098	86 aa		2.61	□□□□□ -1.99
SRB4	YER022W	GDH1	P07262	454 aa	Known RBP	2.61	□□□□□ -1.99
SRB4	YER022W	EXG1	P23776	448 aa	Known RBP	2.61	□□□□□ -1.99
SRB4	YER022W	PHA2	P32452	334 aa		2.61	□□□□□ -1.99
SRB4	YER022W	YBR056W	P38081	501 aa		2.61	□□□□□ -1.99
SRB4	YER022W	YHR122W	P38829	231 aa		2.61	□□□□□ -1.99
SRB4	YER022W	LCP5	P40079	357 aa	Predicted RBP	2.61	□□□□□ -1.99
SRB4	YER022W	MMF1	P40185	145 aa	Known RBP	2.61	□□□□□ -1.99
SRB4	YER022W	MEP1	P40260	492 aa		2.61	□□□□□ -1.99
SRB4	YER022W	YJL213W	P40896	331 aa		2.61	□□□□□ -1.99
SRB4	YER022W	GPI8	P49018	411 aa		2.61	□□□□□ -1.99
SRB4	YER022W	RET3	P53600	189 aa		2.61	□□□□□ -1.99
SRB4	YER022W	MSO1	P53604	210 aa	Known RBP	2.61	□□□□□ -1.99
SRB4	YER022W	GOR1	P53839	350 aa		2.61	□□□□□ -1.99
SRB4	YER022W	ABZ2	Q03266	374 aa		2.61	□□□□□ -1.99
SRB4	YER022W	VPS20	Q04272	221 aa		2.61	□□□□□ -1.99
SRB4	YER022W	MUM3	Q08750	479 aa		2.61	□□□□□ -1.99
SRB4	YER022W	RAX1	Q08760	435 aa		2.61	□□□□□ -1.99
SRB4	YER022W	SNX3	Q08826	162 aa	Known RBP	2.61	□□□□□ -1.99
SRB4	YER022W	NCA2	Q12374	616 aa		2.61	□□□□□ -1.99
SRB4	YER022W	ICT1	Q12385	394 aa		2.61	□□□□□ -1.99
SRB4	YER022W	CYC3	P06182	269 aa		2.61	□□□□□ -1.99
SRB4	YER022W	CAP2	P13517	287 aa		2.61	□□□□□ -1.99
SRB4	YER022W	HEM15	P16622	393 aa		2.61	□□□□□ -1.99
SRB4	YER022W	DBR1	P24309	405 aa	Known RBP	2.61	□□□□□ -1.99
SRB4	YER022W	GRR1	P24814	1151 aa		2.61	□□□□□ -1.99
SRB4	YER022W	NAT2	P37293	288 aa		2.61	□□□□□ -1.99
SRB4	YER022W	MDM31	P38880	579 aa		2.61	□□□□□ -1.99
SRB4	YER022W	ADA2	Q02336	434 aa		2.61	□□□□□ -1.99
SRB4	YER022W	LDS2	Q08218	356 aa		2.61	□□□□□ -1.99
SRB4	YER022W	HIF1	Q12373	385 aa		2.61	□□□□□ -1.99
SRB4	YER022W	YER078W-A	Q3E7A2	54 aa		2.61	□□□□□ -1.99
SRB4	YER022W	YBR298C-A	Q8TGK4	73 aa		2.61	□□□□□ -1.99
SRB4	YER022W	YCL021W-A	Q96VH3	125 aa		2.61	□□□□□ -1.99
SRB4	YER022W	SLM5	P25345	492 aa	Known RBP	2.6	□□□□□ -1.99
SRB4	YER022W	YCL068C	P25593	260 aa		2.6	□□□□□ -1.99
SRB4	YER022W	GPX2	P38143	162 aa		2.6	□□□□□ -1.99
SRB4	YER022W	YDR089W	P38966	869 aa		2.6	□□□□□ -1.99
SRB4	YER022W	KRE9	P39005	276 aa		2.6	□□□□□ -1.99
SRB4	YER022W	MKT1	P40850	830 aa	Known RBP	2.6	□□□□□ -1.99
SRB4	YER022W	IDP2	P41939	412 aa		2.6	□□□□□ -1.99
SRB4	YER022W	SPG5	P42933	373 aa		2.6	□□□□□ -1.99
SRB4	YER022W	YGR117C	P53270	476 aa		2.6	□□□□□ -1.99
SRB4	YER022W	IBD2	P53892	351 aa		2.6	□□□□□ -1.99
SRB4	YER022W	CCE1	Q03702	353 aa		2.6	□□□□□ -1.99
SRB4	YER022W	YMR317W	Q04893	1140 aa		2.6	□□□□□ -1.99
SRB4	YER022W	GRS2	Q06817	618 aa		2.6	□□□□□ -1.99
SRB4	YER022W	HNT3	Q08702	217 aa		2.6	□□□□□ -1.99
SRB4	YER022W	YMR230W-A	Q3E7B5	62 aa		2.6	□□□□□ -1.99
SRB4	YER022W	ATP1	P07251	545 aa	Known RBP	2.59	□□□□□ -1.99
SRB4	YER022W	ARF1	P11076	181 aa	Known RBP	2.59	□□□□□ -1.99
SRB4	YER022W	CPR1	P14832	162 aa	Known RBP	2.59	□□□□□ -1.99
SRB4	YER022W	THR4	P16120	514 aa	Known RBP	2.59	□□□□□ -1.99
SRB4	YER022W	DBP3	P20447	523 aa	Known RBP	2.59	□□□□□ -1.99
SRB4	YER022W	RRP1	P35178	278 aa	Predicted RBP	2.59	□□□□□ -1.99
SRB4	YER022W	YBP1	P38315	674 aa		2.59	□□□□□ -1.99
SRB4	YER022W	ATM1	P40416	690 aa		2.59	□□□□□ -1.99
SRB4	YER022W	PRM1	P53835	661 aa		2.59	□□□□□ -1.99
SRB4	YER022W	AIM33	Q04516	312 aa		2.59	□□□□□ -1.99
SRB4	YER022W	PEX27	Q08580	376 aa		2.59	□□□□□ -1.99
SRB4	YER022W	RTC5	Q12108	567 aa	Known RBP	2.59	□□□□□ -1.99
SRB4	YER022W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
SRB4	YER022W	SPS22	P25380	463 aa		2.59	□□□□□ -2
SRB4	YER022W	MSK1	P32048	576 aa		2.59	□□□□□ -2
SRB4	YER022W	ZUO1	P32527	433 aa	Known RBP	2.59	□□□□□ -2
SRB4	YER022W	YEF1	P32622	495 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms