RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W MRPL35Q06678 367 aa2.44□□□□□ -2.02
SSF2YDR312W TSR1Q07381 788 aaKnown RBP2.44□□□□□ -2.02
SSF2YDR312W COS7Q07788 383 aa2.44□□□□□ -2.02
SSF2YDR312W MED2Q12124 431 aa2.44□□□□□ -2.02
SSF2YDR312W TY3A-GQ12173 290 aa2.44□□□□□ -2.02
SSF2YDR312W PKH2Q12236 1081 aaKnown RBP2.44□□□□□ -2.02
SSF2YDR312W YLR108CQ12259 485 aa2.44□□□□□ -2.02
SSF2YDR312W TY3A-IQ99219 290 aa2.44□□□□□ -2.02
SSF2YDR312W PMD1P32634 1753 aa2.44□□□□□ -2.02
SSF2YDR312W SSK22P25390 1331 aaPredicted RBP2.44□□□□□ -2.02
SSF2YDR312W HHF1P02309 103 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W ILV5P06168 395 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W RHB1P25378 209 aa2.43□□□□□ -2.02
SSF2YDR312W YCR051WP25631 222 aa2.43□□□□□ -2.02
SSF2YDR312W CDC60P26637 1090 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W DBF4P32325 704 aa2.43□□□□□ -2.02
SSF2YDR312W HIR2P32480 875 aa2.43□□□□□ -2.02
SSF2YDR312W PAD1P33751 242 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SSF2YDR312W PXA2P34230 853 aa2.43□□□□□ -2.02
SSF2YDR312W PEX5P35056 612 aa2.43□□□□□ -2.02
SSF2YDR312W STB6P36085 766 aa2.43□□□□□ -2.02
SSF2YDR312W SPL2P38839 148 aa2.43□□□□□ -2.02
SSF2YDR312W LYS1P38998 373 aaRIP-Chip data2.43□□□□□ -2.02not detected
SSF2YDR312W PRE5P40302 234 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W WWM1P43582 211 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W SSN8P47821 323 aa2.43□□□□□ -2.02
SSF2YDR312W RPT4P53549 437 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W YNR048WP53740 393 aa2.43□□□□□ -2.02
SSF2YDR312W BNI5P53890 448 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W HEL2Q05580 639 aaKnown RBP2.43□□□□□ -2.02
SSF2YDR312W DON1Q05610 365 aa2.43□□□□□ -2.02
SSF2YDR312W ORT1Q12375 292 aa2.43□□□□□ -2.02
SSF2YDR312W FAB1P34756 2278 aa2.42□□□□□ -2.02
SSF2YDR312W SLY1P22213 666 aa2.42□□□□□ -2.02
SSF2YDR312W SPS22P25380 463 aa2.42□□□□□ -2.02
SSF2YDR312W RPC53P25441 422 aa2.42□□□□□ -2.02
SSF2YDR312W ADK2P26364 225 aa2.42□□□□□ -2.02
SSF2YDR312W SOR1P35497 357 aaKnown RBP2.42□□□□□ -2.02
SSF2YDR312W NTC20P38302 140 aaPredicted RBP2.42□□□□□ -2.02
SSF2YDR312W PRM5P40476 318 aa2.42□□□□□ -2.02
SSF2YDR312W SSU1P41930 458 aa2.42□□□□□ -2.02
SSF2YDR312W NCA3P46955 337 aa2.42□□□□□ -2.02
SSF2YDR312W HMS2P47175 358 aa2.42□□□□□ -2.02
SSF2YDR312W KAP120Q02932 1032 aa2.42□□□□□ -2.02
SSF2YDR312W SOR2Q07786 357 aa2.42□□□□□ -2.02
SSF2YDR312W RKM1Q08961 583 aaPredicted RBP2.42□□□□□ -2.02
SSF2YDR312W RMD5Q12508 421 aa2.42□□□□□ -2.02
SSF2YDR312W TEF1P02994 458 aaKnown RBP2.41□□□□□ -2.02
SSF2YDR312W ARG4P04076 463 aaPredicted RBP2.41□□□□□ -2.02
SSF2YDR312W CLN3P13365 580 aa2.41□□□□□ -2.02
SSF2YDR312W CTR86P25355 563 aa2.41□□□□□ -2.02
SSF2YDR312W LSB5P25369 354 aa2.41□□□□□ -2.02
SSF2YDR312W YEL045CP32616 141 aa2.41□□□□□ -2.02
SSF2YDR312W SDH3P33421 198 aa2.41□□□□□ -2.02
SSF2YDR312W SWD3P38123 315 aa2.41□□□□□ -2.02
SSF2YDR312W RRT2P38332 387 aa2.41□□□□□ -2.02
SSF2YDR312W MTC6P38849 526 aa2.41□□□□□ -2.02
SSF2YDR312W PTH1P38876 190 aaKnown RBP2.41□□□□□ -2.02
SSF2YDR312W REE1P40893 198 aa2.41□□□□□ -2.02
SSF2YDR312W YGR210CP42942 411 aa2.41□□□□□ -2.02
SSF2YDR312W SKO1Q02100 647 aa2.41□□□□□ -2.02
SSF2YDR312W YDR131CQ03899 556 aa2.41□□□□□ -2.02
SSF2YDR312W PPM1Q04081 328 aa2.41□□□□□ -2.02
SSF2YDR312W BSC6Q08280 497 aa2.41□□□□□ -2.02
SSF2YDR312W SNX3Q08826 162 aaKnown RBP2.41□□□□□ -2.02
SSF2YDR312W ERP4Q12450 207 aa2.41□□□□□ -2.02
SSF2YDR312W AFI1Q99222 893 aa2.41□□□□□ -2.02
SSF2YDR312W FLO1P32768 1537 aa2.4□□□□□ -2.02
SSF2YDR312W RPS8AP0CX39 200 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W RPS8BP0CX40 200 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W SRV2P17555 526 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W URA7P28274 579 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W SRP72P38688 640 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W PHB2P50085 310 aa2.4□□□□□ -2.02
SSF2YDR312W BTN2P53286 410 aa2.4□□□□□ -2.02
SSF2YDR312W CIK1Q01649 594 aa2.4□□□□□ -2.02
SSF2YDR312W HOT1Q03213 719 aa2.4□□□□□ -2.02
SSF2YDR312W YMR181CQ03231 154 aa2.4□□□□□ -2.02
SSF2YDR312W PAL1Q05518 499 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W DIS3Q08162 1001 aaKnown RBP2.4□□□□□ -2.02
SSF2YDR312W REX4Q08237 289 aa2.4□□□□□ -2.02
SSF2YDR312W SGT1Q08446 395 aa2.4□□□□□ -2.02
SSF2YDR312W ISA2Q12425 185 aa2.4□□□□□ -2.02
SSF2YDR312W YDR524C-BQ3E6R4 66 aa2.4□□□□□ -2.02
SSF2YDR312W ADH2P00331 348 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W SCEIP03882 235 aa2.39□□□□□ -2.03
SSF2YDR312W RPL40AP0CH08 128 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W RPL40BP0CH09 128 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W SPO12P17123 173 aa2.39□□□□□ -2.03
SSF2YDR312W URA4P20051 364 aa2.39□□□□□ -2.03
SSF2YDR312W CPR2P23285 205 aa2.39□□□□□ -2.03
SSF2YDR312W ERV1P27882 189 aa2.39□□□□□ -2.03
SSF2YDR312W ARO2P28777 376 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W KKQ8P36004 724 aa2.39□□□□□ -2.03
SSF2YDR312W RRP4P38792 359 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W PHO86P46956 311 aa2.39□□□□□ -2.03
SSF2YDR312W MTM1P53320 366 aa2.39□□□□□ -2.03
SSF2YDR312W GPI15P53961 229 aa2.39□□□□□ -2.03
SSF2YDR312W GIP3Q03016 1276 aa2.39□□□□□ -2.03
SSF2YDR312W IRC4Q03036 179 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms