RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	YGR035C	P53222	116 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	NUP116	Q02630	1113 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	MSC1	Q03104	513 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	TRS31	Q03337	283 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	YDR391C	Q04170	232 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	NUT2	Q06213	157 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	YLR179C	Q06252	201 aa	Known RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	YLR413W	Q06689	675 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	ALE1	Q08548	619 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	ELG1	Q12050	791 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	TY1A-DR3	Q12441	440 aa		4.17	□□□□□ -1.74
SSB1	YDL229W	MRPL23	Q12487	163 aa	Predicted RBP	4.17	□□□□□ -1.74
SSB1	YDL229W	ATP2	P00830	511 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	CLN3	P13365	580 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	HEM15	P16622	393 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	MRPL9	P31334	269 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PRP21	P32524	280 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	SPC29	P33419	253 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	SKT5	P34226	696 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TAT1	P38085	619 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	IST2	P38250	946 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	EXO5	P38289	585 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	RRT2	P38332	387 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YNG2	P38806	282 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	CEM1	P39525	442 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	BDH1	P39714	382 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PSF2	P40359	213 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PFK26	P40433	827 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	RPL34B	P40525	121 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	DIM1	P41819	318 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	SSU1	P41930	458 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	GUF1	P46943	645 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PMT4	P46971	762 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CWC23	P52868	283 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	TPN1	P53099	579 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	COG7	P53195	279 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YGR066C	P53242	292 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	RRP46	P53256	223 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	MPP6	P53725	186 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	CUS2	P53830	285 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	YSA1	Q01976	231 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PEX29	Q03370	554 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	GIS1	Q03833	894 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TVP18	Q04767	167 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YLR271W	Q06152	274 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YLR456W	Q06199	204 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CTS2	Q06350	511 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CDC73	Q06697	393 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CDA1	Q06702	301 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	HRD1	Q08109	551 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YOL075C	Q08234	1294 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	ISA2	Q12425	185 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	ECM3	Q99252	613 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PET20	Q99373	253 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-DR4	O74302	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PHO4	P07270	312 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	MSF1	P08425	469 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-A	P0CX57	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-PR1	P0CX58	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-OR	P0CX59	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-PR2	P0CX60	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-DR5	P0CX65	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-ER2	P0CX66	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-GR3	P0CX67	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-LR1	P0CX68	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-MR2	P0CX69	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	APE1	P14904	514 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	SNF6	P18888	332 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	VBA3	P25594	458 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CDC50	P25656	391 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	AFG1	P32317	509 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	RPC25	P35718	212 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YKL162C	P36052	402 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PDX3	P38075	228 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	YBR013C	P38215	129 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TAE1	P38340	232 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	MGE1	P38523	228 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	BIG1	P38813	335 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YHR122W	P38829	231 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	DHH1	P39517	506 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	EAF5	P39995	279 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	SHR5	P41912	237 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YNL320W	P42840	284 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	RGD2	P43556	714 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-JR2	P47099	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	RPS12	P48589	143 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	GET1	P53192	235 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YTP1	P53584	459 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	PDR16	P53860	351 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	YNL184C	P53876	108 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	NRK1	P53915	240 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	ARK1	P53974	638 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	STP1	Q00947	519 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	UGO1	Q03327	502 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-DR1	Q03856	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CAC2	Q04199	468 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YDR124W	Q04608	324 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-ML1	Q04706	440 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	NAT4	Q04751	285 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	YDR222W	Q04925	415 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms