RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	YGR201C	P42936	225 aa		3.9	□□□□□ -1.78
PIM1	YBL022C	HMS2	P47175	358 aa		3.9	□□□□□ -1.78
PIM1	YBL022C	RSM27	P53305	110 aa		3.9	□□□□□ -1.78
PIM1	YBL022C	ALG11	P53954	548 aa	Known RBP	3.9	□□□□□ -1.78
PIM1	YBL022C	SIW14	P53965	281 aa		3.9	□□□□□ -1.78
PIM1	YBL022C	FMP25	Q08023	583 aa		3.9	□□□□□ -1.78
PIM1	YBL022C	GPM2	Q12008	311 aa		3.9	□□□□□ -1.78
PIM1	YBL022C	RPS18A	P0CX55	146 aa	Known RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	RPS18B	P0CX56	146 aa	Predicted RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	PUT4	P15380	627 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	PRP45	P28004	379 aa	Predicted RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	MKS1	P34072	584 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	SOH1	P38633	127 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	YEL025C	P39991	1188 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	YIL108W	P40483	696 aa	Known RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	UTP25	P40498	721 aa	Known RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	NET1	P47035	1189 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	AIM22	P47051	409 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	DAN1	P47178	298 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	NCS6	P53088	359 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	CDC55	Q00362	526 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	PRP38	Q00723	242 aa	Predicted RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	JIP4	Q03361	876 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	RAD33	Q04231	177 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	ATG38	Q05789	226 aa	Known RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	ATX2	Q12067	313 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	PSF3	Q12146	194 aa		3.9	□□□□□ -1.79
PIM1	YBL022C	HRP1	Q99383	534 aa	Known RBP	3.9	□□□□□ -1.79
PIM1	YBL022C	RPC40	P07703	335 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	CIT2	P08679	460 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	GLC3	P32775	704 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	HIS6	P40545	261 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YJR149W	P47177	404 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	IDP3	P53982	420 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	EGD1	Q02642	157 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	EST3	Q03096	181 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YDR124W	Q04608	324 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	BCH1	Q05029	724 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	BSP1	Q06604	576 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	TYW1	Q08960	810 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	NMD4	Q12129	218 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	RAD52	P06778	471 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	YPK1	P12688	680 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	MTF1	P14908	341 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	SRM1	P21827	482 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YCL002C	P25565	263 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YCR061W	P25639	631 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	ACB1	P31787	87 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	SKG6	P32900	734 aa	Predicted RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	LHP1	P33399	275 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	APT2	P36973	181 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	NVJ1	P38881	321 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	AIM18	P38884	321 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	ARH1	P48360	493 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	FOL2	P51601	243 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	OYE2	Q03558	400 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	MRI1	Q06489	411 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	YLR126C	Q12288	251 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	HMS1	Q12398	434 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	SAS5	Q99314	248 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	ILV1	P00927	576 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	HTA2	P04912	132 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	SCL1	P21243	252 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	IFM1	P25038	676 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	CAF4	P36130	643 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	MMS4	P38257	691 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	SSH1	P38353	490 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	KSP1	P38691	1029 aa	Known RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	MUP3	P38734	546 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YAR028W	P39548	234 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	GAT1	P43574	510 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YJL132W	P47014	750 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	THI11	P47183	340 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	OCA1	P50946	238 aa	Predicted RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	ROG1	P53118	685 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	PRM8	P53174	237 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YNR065C	P53751	1116 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	PRM1	P53835	661 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YPL014W	Q02606	381 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	CSM3	Q04659	317 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	YLR446W	Q06204	433 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	SWA2	Q06677	668 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	PML1	Q07930	204 aa	Predicted RBP	3.89	□□□□□ -1.79
PIM1	YBL022C	SIA1	Q12212	622 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	IZH4	Q99393	312 aa		3.89	□□□□□ -1.79
PIM1	YBL022C	COX11	P19516	300 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	YCK2	P23292	546 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	RPS7A	P26786	190 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	OAR1	P35731	278 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	YKL151C	P36059	337 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SDH4	P37298	181 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	NPP2	P39997	493 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	QDR1	P40475	563 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	NSE4	P43124	402 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SNG1	P46950	547 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	RPS7B	P48164	190 aa	Known RBP	3.88	□□□□□ -1.79
PIM1	YBL022C	YGL159W	P53110	370 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	PKP2	P53170	491 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	NIS1	P53939	407 aa		3.88	□□□□□ -1.79
PIM1	YBL022C	SWF1	Q04629	336 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms