RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W AIM39Q08223 395 aa0.6□□□□□ -2.31
UTP20YBL004W TSC13Q99190 310 aa0.6□□□□□ -2.31
UTP20YBL004W CLG1P35190 452 aa0.6□□□□□ -2.31
UTP20YBL004W ALY1P36117 915 aa0.6□□□□□ -2.31
UTP20YBL004W PPS1P38148 807 aa0.6□□□□□ -2.31
UTP20YBL004W DYS1P38791 387 aa0.6□□□□□ -2.31
UTP20YBL004W UBP6P43593 499 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W IRC7P43623 340 aa0.6□□□□□ -2.31
UTP20YBL004W TRS85P46944 698 aa0.6□□□□□ -2.31
UTP20YBL004W NAM2P11325 894 aa0.6□□□□□ -2.31
UTP20YBL004W PRP4P20053 465 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W MRP20P32387 263 aa0.6□□□□□ -2.31
UTP20YBL004W YKL075CP36083 450 aa0.6□□□□□ -2.31
UTP20YBL004W YHR218WP38899 603 aa0.6□□□□□ -2.31
UTP20YBL004W PFD1P46988 109 aa0.6□□□□□ -2.31
UTP20YBL004W AMA1P50082 593 aa0.6□□□□□ -2.31
UTP20YBL004W NCE103P53615 221 aa0.6□□□□□ -2.31
UTP20YBL004W APM1Q00776 475 aaPredicted RBP0.6□□□□□ -2.31
UTP20YBL004W VMS1Q04311 632 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W YPR091CQ06833 770 aa0.6□□□□□ -2.31
UTP20YBL004W RAF1Q06891 181 aa0.6□□□□□ -2.31
UTP20YBL004W HOS1Q12214 470 aa0.6□□□□□ -2.31
UTP20YBL004W RTR2Q12378 196 aa0.6□□□□□ -2.31
UTP20YBL004W SKS1Q12505 502 aa0.6□□□□□ -2.31
UTP20YBL004W YBL111CQ3E7Y5 667 aa0.6□□□□□ -2.31
UTP20YBL004W SLY1P22213 666 aa0.6□□□□□ -2.31
UTP20YBL004W GSY2P27472 705 aa0.6□□□□□ -2.31
UTP20YBL004W GCD6P32501 712 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W SIP2P34164 415 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W ZRT3P34240 503 aa0.6□□□□□ -2.31
UTP20YBL004W YER130CP39959 443 aa0.6□□□□□ -2.31
UTP20YBL004W YNL195CP40168 261 aa0.6□□□□□ -2.31
UTP20YBL004W YIL169CP40442 995 aa0.6□□□□□ -2.31
UTP20YBL004W PHO86P46956 311 aa0.6□□□□□ -2.31
UTP20YBL004W DPB11P47027 764 aaPredicted RBP0.6□□□□□ -2.31
UTP20YBL004W YGR067CP53243 804 aa0.6□□□□□ -2.31
UTP20YBL004W TIM8P57744 87 aa0.6□□□□□ -2.31
UTP20YBL004W PEX12Q04370 399 aa0.6□□□□□ -2.31
UTP20YBL004W RIM9Q04734 239 aa0.6□□□□□ -2.31
UTP20YBL004W ATG38Q05789 226 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W ARG81P05085 880 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-LR1P0C2J4 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-FP0CX61 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-GR2P0CX62 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-CP25383 438 aa0.6□□□□□ -2.31
UTP20YBL004W THI4P32318 326 aa0.6□□□□□ -2.31
UTP20YBL004W STE14P32584 239 aa0.6□□□□□ -2.31
UTP20YBL004W RFT1P38206 574 aaPredicted RBP0.6□□□□□ -2.31
UTP20YBL004W VMA22P38784 181 aa0.6□□□□□ -2.31
UTP20YBL004W FMP52P40008 231 aa0.6□□□□□ -2.31
UTP20YBL004W RPT2P40327 437 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W EGT2P42835 1041 aa0.6□□□□□ -2.31
UTP20YBL004W YJL043WP47053 257 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-DR2Q03483 438 aa0.6□□□□□ -2.31
UTP20YBL004W VTA1Q06263 330 aa0.6□□□□□ -2.31
UTP20YBL004W ARR1Q06596 294 aa0.6□□□□□ -2.31
UTP20YBL004W SNA4Q07549 140 aa0.6□□□□□ -2.31
UTP20YBL004W RRP40Q08285 240 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W NFI1Q12216 726 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-BQ12260 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-OR2Q12293 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-DR1Q12392 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-OR1Q12439 438 aa0.6□□□□□ -2.31
UTP20YBL004W TY2A-DR3Q99303 438 aa0.6□□□□□ -2.31
UTP20YBL004W URA2P07259 2214 aaKnown RBP0.6□□□□□ -2.31
UTP20YBL004W VPS33P20795 691 aa0.59□□□□□ -2.31
UTP20YBL004W KGD1P20967 1014 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W VMA3P25515 160 aa0.59□□□□□ -2.31
UTP20YBL004W HXT3P32466 567 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W EFB1P32471 206 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W SMI1P32566 505 aa0.59□□□□□ -2.31
UTP20YBL004W VMA11P32842 164 aa0.59□□□□□ -2.31
UTP20YBL004W LDB7P38210 180 aa0.59□□□□□ -2.31
UTP20YBL004W SPP381P38282 291 aaPredicted RBP0.59□□□□□ -2.31
UTP20YBL004W YHB1P39676 399 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W NNF1P47149 201 aa0.59□□□□□ -2.31
UTP20YBL004W LSM3P57743 89 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W YDL180WQ12301 547 aa0.59□□□□□ -2.31
UTP20YBL004W NMT1P14743 455 aa0.59□□□□□ -2.31
UTP20YBL004W SBA1P28707 216 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W PIN4P34217 668 aaKnown RBP RIP-Chip data0.59□□□□□ -2.31not detected
UTP20YBL004W MAK5P38112 773 aaPredicted RBP0.59□□□□□ -2.31
UTP20YBL004W STP2P38704 541 aa0.59□□□□□ -2.31
UTP20YBL004W RFC2P40348 353 aa0.59□□□□□ -2.31
UTP20YBL004W SIM1P40472 476 aa0.59□□□□□ -2.31
UTP20YBL004W SEC28P40509 296 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W PCI8P40512 444 aa0.59□□□□□ -2.31
UTP20YBL004W IBA57P47158 497 aa0.59□□□□□ -2.31
UTP20YBL004W YJR142WP47173 342 aa0.59□□□□□ -2.31
UTP20YBL004W STD1Q02794 444 aa0.59□□□□□ -2.31
UTP20YBL004W TAF12Q03761 539 aa0.59□□□□□ -2.31
UTP20YBL004W MSS116P15424 664 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W SAN1P22470 610 aa0.59□□□□□ -2.31
UTP20YBL004W HYM1P32464 399 aa0.59□□□□□ -2.31
UTP20YBL004W SPS18P32572 300 aa0.59□□□□□ -2.31
UTP20YBL004W GLC7P32598 312 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W VPS27P40343 622 aaKnown RBP0.59□□□□□ -2.31
UTP20YBL004W SHR5P41912 237 aa0.59□□□□□ -2.31
UTP20YBL004W IDP2P41939 412 aa0.59□□□□□ -2.31
UTP20YBL004W SYH1Q02875 849 aaKnown RBP0.59□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 142.4 ms