RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	NGL3	Q03210	505 aa		0.24	□□□□□ -2.37
snR48	snR48	YLR345W	Q06137	509 aa		0.24	□□□□□ -2.37
snR48	snR48	MFG1	Q07684	458 aa		0.24	□□□□□ -2.37
snR48	snR48	YDL007C-A	Q2V2Q0	85 aa		0.24	□□□□□ -2.37
snR48	snR48	RHO2	P06781	192 aa		0.23	□□□□□ -2.37
snR48	snR48	ASP3-2	P0CX77	362 aa		0.23	□□□□□ -2.37
snR48	snR48	ASP3-3	P0CX78	362 aa		0.23	□□□□□ -2.37
snR48	snR48	ASP3-4	P0CX79	362 aa		0.23	□□□□□ -2.37
snR48	snR48	ASP3-1	P0CZ17	362 aa		0.23	□□□□□ -2.37
snR48	snR48	SNF6	P18888	332 aa		0.23	□□□□□ -2.37
snR48	snR48	YEF1	P32622	495 aa		0.23	□□□□□ -2.37
snR48	snR48	SRB2	P34162	210 aa		0.23	□□□□□ -2.37
snR48	snR48	ANR2	P36090	516 aa	Predicted RBP	0.23	□□□□□ -2.37
snR48	snR48	ECM34	P38728	170 aa		0.23	□□□□□ -2.37
snR48	snR48	WSC4	P38739	605 aa		0.23	□□□□□ -2.37
snR48	snR48	YHR054C	P38780	354 aa		0.23	□□□□□ -2.37
snR48	snR48	CCT2	P39076	527 aa	Known RBP	0.23	□□□□□ -2.37
snR48	snR48	PCF11	P39081	626 aa	Predicted RBP	0.23	□□□□□ -2.37
snR48	snR48	PTI1	P39927	425 aa	Predicted RBP	0.23	□□□□□ -2.37
snR48	snR48	DPH1	P40487	425 aa	Known RBP	0.23	□□□□□ -2.37
snR48	snR48	SAP185	P40856	1058 aa		0.23	□□□□□ -2.37
snR48	snR48	ZRG17	P53735	605 aa		0.23	□□□□□ -2.37
snR48	snR48	UBX4	P54730	416 aa		0.23	□□□□□ -2.37
snR48	snR48	OAZ1	Q02803	292 aa		0.23	□□□□□ -2.37
snR48	snR48	MIX17	Q03667	156 aa		0.23	□□□□□ -2.37
snR48	snR48	SMC5	Q08204	1093 aa		0.23	□□□□□ -2.37
snR48	snR48	HUA2	Q12134	243 aa		0.23	□□□□□ -2.37
snR48	snR48	SNU66	Q12420	587 aa	Predicted RBP	0.23	□□□□□ -2.37
snR48	snR48	CEX1	Q12453	761 aa		0.23	□□□□□ -2.37
snR48	snR48	AVL9	Q12500	764 aa		0.23	□□□□□ -2.37
snR48	snR48	CMK2	P22517	447 aa		0.22	□□□□□ -2.37
snR48	snR48	PRD1	P25375	712 aa		0.22	□□□□□ -2.37
snR48	snR48	RAD14	P28519	371 aa		0.22	□□□□□ -2.37
snR48	snR48	SIN4	P32259	974 aa		0.22	□□□□□ -2.37
snR48	snR48	MKK1	P32490	508 aa		0.22	□□□□□ -2.37
snR48	snR48	PRP21	P32524	280 aa	Predicted RBP	0.22	□□□□□ -2.37
snR48	snR48	WBP1	P33767	430 aa	Known RBP	0.22	□□□□□ -2.37
snR48	snR48	TFG2	P41896	400 aa	Predicted RBP	0.22	□□□□□ -2.37
snR48	snR48	YGR149W	P48236	432 aa		0.22	□□□□□ -2.37
snR48	snR48	YGR021W	P53212	290 aa		0.22	□□□□□ -2.37
snR48	snR48	SYF1	Q04048	859 aa	Predicted RBP	0.22	□□□□□ -2.37
snR48	snR48	MRX8	Q05473	314 aa		0.22	□□□□□ -2.37
snR48	snR48	RRP9	Q06506	573 aa	Known RBP	0.22	□□□□□ -2.37
snR48	snR48	EAF3	Q12432	401 aa		0.22	□□□□□ -2.37
snR48	snR48	RMD5	Q12508	421 aa		0.22	□□□□□ -2.37
snR48	snR48	YOR338W	Q99326	363 aa		0.22	□□□□□ -2.37
snR48	snR48	ILV5	P06168	395 aa	Known RBP	0.21	□□□□□ -2.38
snR48	snR48	RPL19A	P0CX82	189 aa	Known RBP	0.21	□□□□□ -2.38
snR48	snR48	RPL19B	P0CX83	189 aa	Predicted RBP	0.21	□□□□□ -2.38
snR48	snR48	SPO12	P17123	173 aa		0.21	□□□□□ -2.38
snR48	snR48	YCL068C	P25593	260 aa		0.21	□□□□□ -2.38
snR48	snR48	PDC2	P32896	925 aa		0.21	□□□□□ -2.38
snR48	snR48	NIP100	P33420	868 aa		0.21	□□□□□ -2.38
snR48	snR48	YBL081W	P38180	368 aa	Known RBP	0.21	□□□□□ -2.38
snR48	snR48	TRR2	P38816	342 aa		0.21	□□□□□ -2.38
snR48	snR48	DOT5	P40553	215 aa		0.21	□□□□□ -2.38
snR48	snR48	RPT6	Q01939	405 aa	Known RBP	0.21	□□□□□ -2.38
snR48	snR48	TDA1	Q03533	586 aa		0.21	□□□□□ -2.38
snR48	snR48	CCE1	Q03702	353 aa		0.21	□□□□□ -2.38
snR48	snR48	SKI7	Q08491	747 aa	Predicted RBP	0.21	□□□□□ -2.38
snR48	snR48	RIM20	Q12033	661 aa		0.21	□□□□□ -2.38
snR48	snR48	NOP58	Q12499	511 aa	Known RBP	0.21	□□□□□ -2.38
snR48	snR48	AUS1	Q08409	1394 aa		0.2	□□□□□ -2.38
snR48	snR48	DAL5	P15365	543 aa		0.2	□□□□□ -2.38
snR48	snR48	SPB1	P25582	841 aa	Predicted RBP	0.2	□□□□□ -2.38
snR48	snR48	PHA2	P32452	334 aa		0.2	□□□□□ -2.38
snR48	snR48	DPH5	P32469	300 aa	Predicted RBP	0.2	□□□□□ -2.38
snR48	snR48	PTH2	P34222	208 aa		0.2	□□□□□ -2.38
snR48	snR48	SOL2	P37262	315 aa		0.2	□□□□□ -2.38
snR48	snR48	SDH4	P37298	181 aa		0.2	□□□□□ -2.38
snR48	snR48	YHK8	P38776	514 aa		0.2	□□□□□ -2.38
snR48	snR48	SAS2	P40963	338 aa		0.2	□□□□□ -2.38
snR48	snR48	YJR008W	P47085	338 aa		0.2	□□□□□ -2.38
snR48	snR48	BAT2	P47176	376 aa	Known RBP	0.2	□□□□□ -2.38
snR48	snR48	DUO1	P53168	247 aa	Known RBP	0.2	□□□□□ -2.38
snR48	snR48	ENT5	Q03769	411 aa	Known RBP	0.2	□□□□□ -2.38
snR48	snR48	INP2	Q03824	705 aa		0.2	□□□□□ -2.38
snR48	snR48	YDR115W	Q04598	105 aa		0.2	□□□□□ -2.38
snR48	snR48	PLB3	Q08108	686 aa		0.2	□□□□□ -2.38
snR48	snR48	DDC1	Q08949	612 aa		0.2	□□□□□ -2.38
snR48	snR48	YML133C	Q03099	1374 aa		0.19	□□□□□ -2.38
snR48	snR48	YLL067C	Q07888	1374 aa		0.19	□□□□□ -2.38
snR48	snR48	YLL066C	Q99208	1374 aa		0.19	□□□□□ -2.38
snR48	snR48	PIS1	P06197	220 aa	Known RBP	0.19	□□□□□ -2.38
snR48	snR48	RRP1	P35178	278 aa	Predicted RBP	0.19	□□□□□ -2.38
snR48	snR48	RRN3	P36070	627 aa		0.19	□□□□□ -2.38
snR48	snR48	COS4	P43542	379 aa		0.19	□□□□□ -2.38
snR48	snR48	BIO3	P50277	480 aa		0.19	□□□□□ -2.38
snR48	snR48	YGR066C	P53242	292 aa		0.19	□□□□□ -2.38
snR48	snR48	YGR250C	P53316	781 aa	Known RBP	0.19	□□□□□ -2.38
snR48	snR48	CDD1	Q06549	142 aa		0.19	□□□□□ -2.38
snR48	snR48	MDM36	Q06820	579 aa		0.19	□□□□□ -2.38
snR48	snR48	RAX1	Q08760	435 aa		0.19	□□□□□ -2.38
snR48	snR48	YJR112W-A	Q3E743	109 aa		0.19	□□□□□ -2.38
snR48	snR48	STE7	P06784	515 aa		0.18	□□□□□ -2.38
snR48	snR48	CDC16	P09798	840 aa		0.18	□□□□□ -2.38
snR48	snR48	FUS3	P16892	353 aa	Known RBP	0.18	□□□□□ -2.38
snR48	snR48	EPT1	P22140	391 aa		0.18	□□□□□ -2.38
snR48	snR48	SKG6	P32900	734 aa	Predicted RBP	0.18	□□□□□ -2.38
snR48	snR48	SMP1	P38128	452 aa		0.18	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms