RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W MIX23P38162 196 aa2.51□□□□□ -2.01
UBP16YPL072W VMA13P41807 478 aaKnown RBP2.51□□□□□ -2.01
UBP16YPL072W ADA2Q02336 434 aa2.51□□□□□ -2.01
UBP16YPL072W PRP42Q03776 544 aaKnown RBP2.51□□□□□ -2.01
UBP16YPL072W RBD2Q12270 262 aa2.51□□□□□ -2.01
UBP16YPL072W HIF1Q12373 385 aa2.51□□□□□ -2.01
UBP16YPL072W TFB5Q3E7C1 72 aaPredicted RBP2.51□□□□□ -2.01
UBP16YPL072W ATP10P18496 279 aa2.5□□□□□ -2.01
UBP16YPL072W SNT1P25357 1226 aa2.5□□□□□ -2.01
UBP16YPL072W RHB1P25378 209 aa2.5□□□□□ -2.01
UBP16YPL072W KRE2P27809 442 aa2.5□□□□□ -2.01
UBP16YPL072W OLA1P38219 394 aaKnown RBP2.5□□□□□ -2.01
UBP16YPL072W ZTA1P38230 334 aaKnown RBP2.5□□□□□ -2.01
UBP16YPL072W FAD1P38913 306 aa2.5□□□□□ -2.01
UBP16YPL072W ISC1P40015 477 aaKnown RBP2.5□□□□□ -2.01
UBP16YPL072W EPL1P43572 832 aa2.5□□□□□ -2.01
UBP16YPL072W MLC1P53141 149 aa2.5□□□□□ -2.01
UBP16YPL072W GOR1P53839 350 aa2.5□□□□□ -2.01
UBP16YPL072W RHO5P53879 331 aaKnown RBP2.5□□□□□ -2.01
UBP16YPL072W UAF30Q08747 228 aa2.5□□□□□ -2.01
UBP16YPL072W YPL199CQ08954 240 aa2.5□□□□□ -2.01
UBP16YPL072W TY1B-AO13527 1196 aaKnown RBP2.49□□□□□ -2.01
UBP16YPL072W RIP1P08067 215 aa2.49□□□□□ -2.01
UBP16YPL072W YAR066WP0CX18 203 aa2.49□□□□□ -2.01
UBP16YPL072W YHR214WP0CX19 203 aa2.49□□□□□ -2.01
UBP16YPL072W RPI1P23250 407 aaKnown RBP2.49□□□□□ -2.01
UBP16YPL072W RIM1P32445 135 aaKnown RBP2.49□□□□□ -2.01
UBP16YPL072W UIP5P36137 443 aa2.49□□□□□ -2.01
UBP16YPL072W KEL1P38853 1164 aaKnown RBP2.49□□□□□ -2.01
UBP16YPL072W YMR147WP40218 223 aaKnown RBP2.49□□□□□ -2.01
UBP16YPL072W VHS2P40463 436 aa2.49□□□□□ -2.01
UBP16YPL072W TFG2P41896 400 aaPredicted RBP2.49□□□□□ -2.01
UBP16YPL072W FYV8P46949 817 aaKnown RBP2.49□□□□□ -2.01
UBP16YPL072W PIB2P53191 635 aa2.49□□□□□ -2.01
UBP16YPL072W OCA2P53949 197 aa2.49□□□□□ -2.01
UBP16YPL072W PNG1Q02890 363 aa2.49□□□□□ -2.01
UBP16YPL072W HSP31Q04432 237 aa2.49□□□□□ -2.01
UBP16YPL072W PET123P17558 318 aa2.48□□□□□ -2.01
UBP16YPL072W RVS161P25343 265 aaKnown RBP2.48□□□□□ -2.01
UBP16YPL072W SPS22P25380 463 aa2.48□□□□□ -2.01
UBP16YPL072W RRN10P38204 145 aa2.48□□□□□ -2.01
UBP16YPL072W PCF11P39081 626 aaPredicted RBP2.48□□□□□ -2.01
UBP16YPL072W SER3P40054 469 aa2.48□□□□□ -2.01
UBP16YPL072W YIL089WP40500 205 aa2.48□□□□□ -2.01
UBP16YPL072W WWM1P43582 211 aaKnown RBP2.48□□□□□ -2.01
UBP16YPL072W TRS85P46944 698 aa2.48□□□□□ -2.01
UBP16YPL072W RPN9Q04062 393 aaKnown RBP2.48□□□□□ -2.01
UBP16YPL072W YMR027WQ04371 470 aa2.48□□□□□ -2.01
UBP16YPL072W HRI1Q05905 244 aaKnown RBP2.48□□□□□ -2.01
UBP16YPL072W REX4Q08237 289 aa2.48□□□□□ -2.01
UBP16YPL072W HIS4P00815 799 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W SCEIP03882 235 aa2.47□□□□□ -2.01
UBP16YPL072W SIN4P32259 974 aa2.47□□□□□ -2.01
UBP16YPL072W APE2P32454 952 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W PRP21P32524 280 aaPredicted RBP2.47□□□□□ -2.01
UBP16YPL072W ECM25P32525 599 aa2.47□□□□□ -2.01
UBP16YPL072W ASC1P38011 319 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W PFF1P38244 976 aa2.47□□□□□ -2.01
UBP16YPL072W YJR011CP47086 261 aaPredicted RBP2.47□□□□□ -2.01
UBP16YPL072W SSN8P47821 323 aa2.47□□□□□ -2.01
UBP16YPL072W YIF1P53845 314 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W MRP51Q02950 344 aa2.47□□□□□ -2.01
UBP16YPL072W GIP3Q03016 1276 aa2.47□□□□□ -2.01
UBP16YPL072W YFH1Q07540 174 aa2.47□□□□□ -2.01
UBP16YPL072W BUG1Q12191 341 aa2.47□□□□□ -2.01
UBP16YPL072W RUP1Q12242 671 aa2.47□□□□□ -2.01
UBP16YPL072W SAM1P10659 382 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W SAM2P19358 384 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W PHO91P27514 894 aa2.47□□□□□ -2.01
UBP16YPL072W POT1P27796 417 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
UBP16YPL072W HSP104P31539 908 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W YBL028CP38202 106 aa2.47□□□□□ -2.01
UBP16YPL072W KAP104P38217 918 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W SIF2P38262 535 aa2.47□□□□□ -2.01
UBP16YPL072W YSW1P38280 609 aa2.47□□□□□ -2.01
UBP16YPL072W PAN6P40459 309 aa2.47□□□□□ -2.01
UBP16YPL072W PRM5P40476 318 aa2.47□□□□□ -2.01
UBP16YPL072W OST1P41543 476 aaKnown RBP2.47□□□□□ -2.01
UBP16YPL072W ECM27P47144 725 aa2.47□□□□□ -2.01
UBP16YPL072W BRO1P48582 844 aa2.47□□□□□ -2.01
UBP16YPL072W TOM22P49334 152 aa2.47□□□□□ -2.01
UBP16YPL072W SHY1P53266 389 aa2.47□□□□□ -2.01
UBP16YPL072W YDR541CQ03049 344 aa2.47□□□□□ -2.01
UBP16YPL072W YDR387CQ04162 555 aa2.47□□□□□ -2.01
UBP16YPL072W MUM3Q08750 479 aa2.47□□□□□ -2.01
UBP16YPL072W RKM1Q08961 583 aaPredicted RBP2.47□□□□□ -2.01
UBP16YPL072W NBL1Q3E7Y6 73 aa2.47□□□□□ -2.01
UBP16YPL072W SRN2Q99176 213 aa2.47□□□□□ -2.01
UBP16YPL072W DAL2P25335 343 aa2.46□□□□□ -2.02
UBP16YPL072W YEL043WP32618 956 aa2.46□□□□□ -2.02
UBP16YPL072W MST28P39552 234 aa2.46□□□□□ -2.02
UBP16YPL072W CHS6P40955 746 aa2.46□□□□□ -2.02
UBP16YPL072W CUE3P53137 624 aaKnown RBP2.46□□□□□ -2.02
UBP16YPL072W AQR1P53943 586 aa2.46□□□□□ -2.02
UBP16YPL072W HER2Q03557 464 aa2.46□□□□□ -2.02
UBP16YPL072W DBP9Q06218 594 aaKnown RBP2.46□□□□□ -2.02
UBP16YPL072W WTM1Q12363 437 aaKnown RBP2.46□□□□□ -2.02
UBP16YPL072W RRD2Q12461 358 aa2.46□□□□□ -2.02
UBP16YPL072W RAD61Q99359 647 aa2.46□□□□□ -2.02
UBP16YPL072W ADE4P04046 510 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms