RNA–Protein interactions for RNA: YPL043W

NOP4, Transcript of Nucleolar protein, yeast

Gene NOP4, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP4	YPL043W	ARC1	P46672	376 aa	Known RBP	3.13	□□□□□ -1.91
NOP4	YPL043W	TEL2	P53038	688 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	AAT1	Q01802	451 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	YMR210W	Q03649	449 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	VBA4	Q04602	768 aa	Known RBP	3.13	□□□□□ -1.91
NOP4	YPL043W	RIF2	Q06208	395 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	SEC10	Q06245	871 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	VTA1	Q06263	330 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	YOR012W	Q12351	137 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	GTT2	Q12390	233 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	SKM1	Q12469	655 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	YPT6	Q99260	215 aa		3.13	□□□□□ -1.91
NOP4	YPL043W	YAR066W	P0CX18	203 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	YHR214W	P0CX19	203 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	RPL1A	P0CX43	217 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	RPL1B	P0CX44	217 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	SAM35	P14693	329 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	RPB4	P20433	221 aa	Predicted RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	SEC15	P22224	910 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	RPC19	P28000	142 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	ATP11	P32453	318 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	CSE1	P33307	960 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	SOL2	P37262	315 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	PFS1	P38872	237 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	BAT1	P38891	393 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	UME6	P39001	836 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	CEM1	P39525	442 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	YEL073C	P39974	107 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	TIF34	P40217	347 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	UTP18	P40362	594 aa	Predicted RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	YJR154W	P47181	346 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	COQ5	P49017	307 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	MRM2	P53123	320 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	LSM3	P57743	89 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	NHP10	Q03435	203 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	ARG7	Q04728	441 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	TRI1	Q05024	226 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	GLO2	Q05584	274 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	DBP9	Q06218	594 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	VPS68	Q12016	184 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	YLR358C	O13565	187 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	HEM2	P05373	342 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	SPT3	P06844	337 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	SPT15	P13393	240 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	PRP16	P15938	1071 aa	Predicted RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	HNM1	P19807	563 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	RFA1	P22336	621 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	CRM1	P30822	1084 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	SDH3	P33421	198 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	SIP2	P34164	415 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	DEF1	P35732	738 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	SRX1	P36077	127 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
NOP4	YPL043W	UBA4	P38820	440 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	DHH1	P39517	506 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	NPT1	P39683	429 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	YJL070C	P40361	888 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	YRB1	P41920	201 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	MNN10	P50108	393 aa	Known RBP	3.12	□□□□□ -1.91
NOP4	YPL043W	YGL108C	P53139	140 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	IBD2	P53892	351 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	CUZ1	P53899	274 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	SLM2	P53955	656 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	YPL113C	Q02961	396 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	ROT1	Q03691	256 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	YML053C	Q04978	212 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	FAR10	Q06001	478 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	AIM6	Q07716	390 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	RRT8	Q08219	342 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	HUA2	Q12134	243 aa		3.12	□□□□□ -1.91
NOP4	YPL043W	FRS1	P15624	595 aa	Known RBP	3.11	□□□□□ -1.91
NOP4	YPL043W	EXO70	P19658	623 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	MRE11	P32829	692 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	VPS17	P32913	551 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	YPT52	P36018	234 aa	Known RBP	3.11	□□□□□ -1.91
NOP4	YPL043W	RFC3	P38629	340 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	RRP3	P38712	501 aa	Known RBP	3.11	□□□□□ -1.91
NOP4	YPL043W	ARB1	P40024	610 aa	Known RBP	3.11	□□□□□ -1.91
NOP4	YPL043W	ATF1	P40353	525 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	IRC24	P40580	263 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	YFR020W	P43600	232 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	SSY5	P47002	699 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	TAF4	P50105	388 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	GLO1	P50107	326 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	EXG2	P52911	562 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	EFM5	P53200	248 aa	Known RBP	3.11	□□□□□ -1.91
NOP4	YPL043W	NNF2	P53253	936 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	SHY1	P53266	389 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	YMR102C	Q03177	834 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	CCE1	Q03702	353 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	FMN1	Q03778	218 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	RAD34	Q06665	692 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	YOL019W	Q08157	551 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	UAF30	Q08747	228 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	SRO7	Q12038	1033 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	LEU9	Q12166	604 aa	Known RBP	3.11	□□□□□ -1.91
NOP4	YPL043W	STT4	P37297	1900 aa		3.11	□□□□□ -1.91
NOP4	YPL043W	NMT1	P14743	455 aa		3.1	□□□□□ -1.91
NOP4	YPL043W	RAD14	P28519	371 aa		3.1	□□□□□ -1.91
NOP4	YPL043W	MVD1	P32377	396 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms