RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W CHS1P08004 1131 aa3.59□□□□□ -1.83
HSH49YOR319W YFL068WP0CX99 160 aa3.59□□□□□ -1.83
HSH49YOR319W YLL066W-AP0CY00 160 aa3.59□□□□□ -1.83
HSH49YOR319W YLL067W-AP0CY01 160 aa3.59□□□□□ -1.83
HSH49YOR319W GLN3P18494 730 aa3.59□□□□□ -1.83
HSH49YOR319W YCR043CP25361 127 aa3.59□□□□□ -1.83
HSH49YOR319W LSB5P25369 354 aa3.59□□□□□ -1.83
HSH49YOR319W YCR100CP25606 316 aa3.59□□□□□ -1.83
HSH49YOR319W PSO2P30620 661 aa3.59□□□□□ -1.83
HSH49YOR319W ARC40P38328 384 aaKnown RBP3.59□□□□□ -1.83
HSH49YOR319W STP2P38704 541 aa3.59□□□□□ -1.83
HSH49YOR319W YDR089WP38966 869 aa3.59□□□□□ -1.83
HSH49YOR319W YER079WP40052 210 aaKnown RBP3.59□□□□□ -1.83
HSH49YOR319W OSW5P40219 148 aa3.59□□□□□ -1.83
HSH49YOR319W DIM1P41819 318 aaKnown RBP3.59□□□□□ -1.83
HSH49YOR319W SSN8P47821 323 aa3.59□□□□□ -1.83
HSH49YOR319W MPS2P53159 387 aa3.59□□□□□ -1.83
HSH49YOR319W RTT102P53330 157 aa3.59□□□□□ -1.83
HSH49YOR319W ODC1Q03028 310 aa3.59□□□□□ -1.83
HSH49YOR319W RSN1Q03516 953 aa3.59□□□□□ -1.83
HSH49YOR319W VTI1Q04338 217 aa3.59□□□□□ -1.83
HSH49YOR319W RRP9Q06506 573 aaKnown RBP3.59□□□□□ -1.83
HSH49YOR319W ORT1Q12375 292 aa3.59□□□□□ -1.83
HSH49YOR319W STE3P06783 470 aa3.58□□□□□ -1.84
HSH49YOR319W DAL80P26343 269 aa3.58□□□□□ -1.84
HSH49YOR319W SPT10P35208 640 aa3.58□□□□□ -1.84
HSH49YOR319W MKT1P40850 830 aaKnown RBP3.58□□□□□ -1.84
HSH49YOR319W HST1P53685 503 aa3.58□□□□□ -1.84
HSH49YOR319W YNR048WP53740 393 aa3.58□□□□□ -1.84
HSH49YOR319W ARP5P53946 755 aa3.58□□□□□ -1.84
HSH49YOR319W STD1Q02794 444 aa3.58□□□□□ -1.84
HSH49YOR319W MRP51Q02950 344 aa3.58□□□□□ -1.84
HSH49YOR319W URC2Q04411 772 aa3.58□□□□□ -1.84
HSH49YOR319W YMR034CQ05131 434 aaPredicted RBP3.58□□□□□ -1.84
HSH49YOR319W SNT309Q06091 175 aaPredicted RBP3.58□□□□□ -1.84
HSH49YOR319W RNH203Q12338 110 aa3.58□□□□□ -1.84
HSH49YOR319W RMD5Q12508 421 aa3.58□□□□□ -1.84
HSH49YOR319W CSR2Q12734 1121 aa3.58□□□□□ -1.84
HSH49YOR319W RPC40P07703 335 aaKnown RBP3.57□□□□□ -1.84
HSH49YOR319W SLM5P25345 492 aaKnown RBP3.57□□□□□ -1.84
HSH49YOR319W YBR056WP38081 501 aa3.57□□□□□ -1.84
HSH49YOR319W SPP381P38282 291 aaPredicted RBP3.57□□□□□ -1.84
HSH49YOR319W MMF1P40185 145 aaKnown RBP3.57□□□□□ -1.84
HSH49YOR319W GCD10P41814 478 aa3.57□□□□□ -1.84
HSH49YOR319W TES1P41903 349 aaKnown RBP3.57□□□□□ -1.84
HSH49YOR319W LAM5P43560 674 aa3.57□□□□□ -1.84
HSH49YOR319W FRE4P53746 719 aa3.57□□□□□ -1.84
HSH49YOR319W SMA2Q04658 369 aa3.57□□□□□ -1.84
HSH49YOR319W GRS2Q06817 618 aa3.57□□□□□ -1.84
HSH49YOR319W MUM3Q08750 479 aa3.57□□□□□ -1.84
HSH49YOR319W SRL2Q12020 392 aa3.57□□□□□ -1.84
HSH49YOR319W RPL12AP0CX53 165 aaKnown RBP3.56□□□□□ -1.84
HSH49YOR319W RPL12BP0CX54 165 aa3.56□□□□□ -1.84
HSH49YOR319W THR4P16120 514 aaKnown RBP3.56□□□□□ -1.84
HSH49YOR319W SPO12P17123 173 aa3.56□□□□□ -1.84
HSH49YOR319W TIP1P27654 210 aaPredicted RBP3.56□□□□□ -1.84
HSH49YOR319W TRS65P32893 560 aa3.56□□□□□ -1.84
HSH49YOR319W PTR2P32901 601 aa3.56□□□□□ -1.84
HSH49YOR319W SKN1P33336 771 aa3.56□□□□□ -1.84
HSH49YOR319W LIN1P38852 340 aaPredicted RBP3.56□□□□□ -1.84
HSH49YOR319W MET30P39014 640 aa3.56□□□□□ -1.84
HSH49YOR319W CCT4P39078 528 aaKnown RBP3.56□□□□□ -1.84
HSH49YOR319W HAT2P39984 401 aa3.56□□□□□ -1.84
HSH49YOR319W YIL169CP40442 995 aa3.56□□□□□ -1.84
HSH49YOR319W IKS1P47042 667 aa3.56□□□□□ -1.84
HSH49YOR319W ARK1P53974 638 aa3.56□□□□□ -1.84
HSH49YOR319W ERV25P54837 211 aaKnown RBP3.56□□□□□ -1.84
HSH49YOR319W RPM2Q02773 1202 aa3.56□□□□□ -1.84
HSH49YOR319W BET5Q03630 159 aa3.56□□□□□ -1.84
HSH49YOR319W PEX27Q08580 376 aa3.56□□□□□ -1.84
HSH49YOR319W TIM18Q08749 192 aa3.56□□□□□ -1.84
HSH49YOR319W NDD1Q08887 554 aa3.56□□□□□ -1.84
HSH49YOR319W YPR022CQ12139 1133 aa3.56□□□□□ -1.84
HSH49YOR319W PKH2Q12236 1081 aaKnown RBP3.56□□□□□ -1.84
HSH49YOR319W CEX1Q12453 761 aa3.56□□□□□ -1.84
HSH49YOR319W INO80P53115 1489 aa3.55□□□□□ -1.84
HSH49YOR319W TEF1P02994 458 aaKnown RBP3.55□□□□□ -1.84
HSH49YOR319W MTF1P14908 341 aaKnown RBP3.55□□□□□ -1.84
HSH49YOR319W NDC1P32500 655 aa3.55□□□□□ -1.84
HSH49YOR319W GLC7P32598 312 aaKnown RBP3.55□□□□□ -1.84
HSH49YOR319W SSO2P39926 295 aa3.55□□□□□ -1.84
HSH49YOR319W SHO1P40073 367 aa3.55□□□□□ -1.84
HSH49YOR319W ALG8P40351 577 aa3.55□□□□□ -1.84
HSH49YOR319W PHB2P50085 310 aa3.55□□□□□ -1.84
HSH49YOR319W PMT5P52867 743 aa3.55□□□□□ -1.84
HSH49YOR319W POP6P53218 158 aa3.55□□□□□ -1.84
HSH49YOR319W RRP46P53256 223 aaPredicted RBP3.55□□□□□ -1.84
HSH49YOR319W GIS2P53849 153 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
HSH49YOR319W VPS20Q04272 221 aa3.55□□□□□ -1.84
HSH49YOR319W YMR310CQ04867 317 aaPredicted RBP3.55□□□□□ -1.84
HSH49YOR319W FMP42Q04991 504 aa3.55□□□□□ -1.84
HSH49YOR319W HCR1Q05775 265 aaKnown RBP3.55□□□□□ -1.84
HSH49YOR319W RAD61Q99359 647 aa3.55□□□□□ -1.84
HSH49YOR319W OPI3P05375 206 aa3.54□□□□□ -1.84
HSH49YOR319W CDC37P06101 506 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W MAS1P10507 462 aa3.54□□□□□ -1.84
HSH49YOR319W SAM1P10659 382 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W ARF1P11076 181 aaKnown RBP3.54□□□□□ -1.84
HSH49YOR319W GCD2P12754 651 aaPredicted RBP3.54□□□□□ -1.84
HSH49YOR319W SAG1P20840 650 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms