RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C SYF1Q04048 859 aaPredicted RBP3.24□□□□□ -1.89
VPS33YLR396C ERB1Q04660 807 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C YLR352WQ06479 807 aa3.24□□□□□ -1.89
VPS33YLR396C YDL057WQ07379 328 aa3.24□□□□□ -1.89
VPS33YLR396C UIP4Q08926 304 aa3.24□□□□□ -1.89
VPS33YLR396C BUG1Q12191 341 aa3.24□□□□□ -1.89
VPS33YLR396C APC2Q12440 853 aa3.24□□□□□ -1.89
VPS33YLR396C ARP6Q12509 438 aa3.24□□□□□ -1.89
VPS33YLR396C FOB1O13329 566 aa3.24□□□□□ -1.89
VPS33YLR396C PEP4P07267 405 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C PEP5P12868 1029 aa3.24□□□□□ -1.89
VPS33YLR396C PMS1P14242 873 aa3.24□□□□□ -1.89
VPS33YLR396C POL30P15873 258 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C SMY1P32364 656 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C NIP100P33420 868 aa3.24□□□□□ -1.89
VPS33YLR396C HCS1P34243 683 aa3.24□□□□□ -1.89
VPS33YLR396C YKL023WP36103 277 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C PFF1P38244 976 aa3.24□□□□□ -1.89
VPS33YLR396C MSR1P38714 643 aa3.24□□□□□ -1.89
VPS33YLR396C UTP9P38882 575 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C YHR210CP38893 341 aa3.24□□□□□ -1.89
VPS33YLR396C SMC2P38989 1170 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C YHB1P39676 399 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C FCY21P40039 528 aa3.24□□□□□ -1.89
VPS33YLR396C MKT1P40850 830 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C ATG27P46989 271 aa3.24□□□□□ -1.89
VPS33YLR396C PET130P47065 347 aa3.24□□□□□ -1.89
VPS33YLR396C USE1P53146 245 aa3.24□□□□□ -1.89
VPS33YLR396C LSC1P53598 329 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C TOF1P53840 1238 aa3.24□□□□□ -1.89
VPS33YLR396C TMA20P89886 181 aaPredicted RBP3.24□□□□□ -1.89
VPS33YLR396C TOF2Q02208 771 aa3.24□□□□□ -1.89
VPS33YLR396C SWP1Q02795 286 aa3.24□□□□□ -1.89
VPS33YLR396C DML1Q03652 475 aa3.24□□□□□ -1.89
VPS33YLR396C FMP42Q04991 504 aa3.24□□□□□ -1.89
VPS33YLR396C FUS2Q05670 677 aa3.24□□□□□ -1.89
VPS33YLR396C ALE1Q08548 619 aa3.24□□□□□ -1.89
VPS33YLR396C YOR365CQ08844 703 aa3.24□□□□□ -1.89
VPS33YLR396C TIP41Q12199 356 aa3.24□□□□□ -1.89
VPS33YLR396C RAD61Q99359 647 aa3.24□□□□□ -1.89
VPS33YLR396C CMD1P06787 147 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C SSC1P0CS90 654 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C BAR1P12630 587 aa3.23□□□□□ -1.89
VPS33YLR396C CKA1P15790 372 aa3.23□□□□□ -1.89
VPS33YLR396C MRPL25P23369 157 aa3.23□□□□□ -1.89
VPS33YLR396C YCR016WP25617 290 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C BMH2P34730 273 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C TPO5P36029 618 aa3.23□□□□□ -1.89
VPS33YLR396C SLM4P38247 162 aa3.23□□□□□ -1.89
VPS33YLR396C AST2P39945 430 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C AVT6P40074 448 aa3.23□□□□□ -1.89
VPS33YLR396C MET18P40469 1032 aa3.23□□□□□ -1.89
VPS33YLR396C AIM22P47051 409 aa3.23□□□□□ -1.89
VPS33YLR396C HAM1P47119 197 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C YJR154WP47181 346 aa3.23□□□□□ -1.89
VPS33YLR396C SRB7P47822 140 aa3.23□□□□□ -1.89
VPS33YLR396C BUD32P53323 261 aa3.23□□□□□ -1.89
VPS33YLR396C SHR3Q02774 210 aa3.23□□□□□ -1.89
VPS33YLR396C GPI17Q04080 534 aa3.23□□□□□ -1.89
VPS33YLR396C HSH49Q99181 213 aaPredicted RBP3.23□□□□□ -1.89
VPS33YLR396C MET17P06106 444 aa3.23□□□□□ -1.89
VPS33YLR396C CDC23P16522 626 aa3.23□□□□□ -1.89
VPS33YLR396C GPI10P30777 616 aa3.23□□□□□ -1.89
VPS33YLR396C HIR2P32480 875 aa3.23□□□□□ -1.89
VPS33YLR396C COY1P34237 679 aa3.23□□□□□ -1.89
VPS33YLR396C RCK2P38623 610 aa3.23□□□□□ -1.89
VPS33YLR396C LAM5P43560 674 aa3.23□□□□□ -1.89
VPS33YLR396C YJR054WP47114 497 aa3.23□□□□□ -1.89
VPS33YLR396C PRP42Q03776 544 aaKnown RBP3.23□□□□□ -1.89
VPS33YLR396C MSS11Q03825 758 aa3.23□□□□□ -1.89
VPS33YLR396C SMC5Q08204 1093 aa3.23□□□□□ -1.89
VPS33YLR396C RSA1Q08932 381 aa3.23□□□□□ -1.89
VPS33YLR396C RKM1Q08961 583 aaPredicted RBP3.23□□□□□ -1.89
VPS33YLR396C GRX6Q12438 231 aa3.23□□□□□ -1.89
VPS33YLR396C ACH1P32316 526 aa3.22□□□□□ -1.89
VPS33YLR396C VPS21P36017 210 aaKnown RBP3.22□□□□□ -1.89
VPS33YLR396C SNL1P40548 159 aa3.22□□□□□ -1.89
VPS33YLR396C AZF1P41696 914 aa3.22□□□□□ -1.89
VPS33YLR396C ALK1P43633 760 aaKnown RBP3.22□□□□□ -1.89
VPS33YLR396C TAF6P53040 516 aa3.22□□□□□ -1.89
VPS33YLR396C UTP6Q02354 440 aaKnown RBP3.22□□□□□ -1.89
VPS33YLR396C FMN1Q03778 218 aa3.22□□□□□ -1.89
VPS33YLR396C YDR415CQ04033 374 aaPredicted RBP3.22□□□□□ -1.89
VPS33YLR396C SEC10Q06245 871 aa3.22□□□□□ -1.89
VPS33YLR396C FMP45Q07651 309 aa3.22□□□□□ -1.89
VPS33YLR396C THI20Q08224 551 aa3.22□□□□□ -1.89
VPS33YLR396C PDH1Q12428 516 aaKnown RBP3.22□□□□□ -1.89
VPS33YLR396C NBL1Q3E7Y6 73 aa3.22□□□□□ -1.89
VPS33YLR396C FKS3Q04952 1785 aa3.22□□□□□ -1.89
VPS33YLR396C PDE2P06776 526 aa3.21□□□□□ -1.89
VPS33YLR396C RAD52P06778 471 aaKnown RBP3.21□□□□□ -1.89
VPS33YLR396C GLN3P18494 730 aa3.21□□□□□ -1.89
VPS33YLR396C HSP30P25619 332 aa3.21□□□□□ -1.89
VPS33YLR396C HXT3P32466 567 aaKnown RBP3.21□□□□□ -1.89
VPS33YLR396C ERG1P32476 496 aaKnown RBP3.21□□□□□ -1.89
VPS33YLR396C MRX3P38172 270 aa3.21□□□□□ -1.89
VPS33YLR396C CST26P38226 397 aa3.21□□□□□ -1.89
VPS33YLR396C VID24P38263 362 aa3.21□□□□□ -1.89
VPS33YLR396C YBP1P38315 674 aa3.21□□□□□ -1.89
VPS33YLR396C SWC5P38326 303 aa3.21□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms