RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C TY1A-OLQ92392 440 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C AAC1P04710 309 aa4.68□□□□□ -1.66
CAF4YKR036C RAD52P06778 471 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C ALG7P07286 448 aa4.68□□□□□ -1.66
CAF4YKR036C ERR1P0CX10 437 aa4.68□□□□□ -1.66
CAF4YKR036C ERR2P0CX11 437 aa4.68□□□□□ -1.66
CAF4YKR036C FRS1P15624 595 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C TAH1P25638 111 aaPredicted RBP4.68□□□□□ -1.66
CAF4YKR036C PIN4P34217 668 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
CAF4YKR036C HMT1P38074 348 aa4.68□□□□□ -1.66
CAF4YKR036C ERP2P39704 215 aa4.68□□□□□ -1.66
CAF4YKR036C YEN1P40028 759 aa4.68□□□□□ -1.66
CAF4YKR036C PIG2P40187 538 aa4.68□□□□□ -1.66
CAF4YKR036C AGE2P40529 298 aa4.68□□□□□ -1.66
CAF4YKR036C YJL218WP40892 196 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C VMA13P41807 478 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C ERR3P42222 437 aa4.68□□□□□ -1.66
CAF4YKR036C GYP8P43570 497 aa4.68□□□□□ -1.66
CAF4YKR036C HXT16P47185 567 aa4.68□□□□□ -1.66
CAF4YKR036C JAC1P53193 184 aa4.68□□□□□ -1.66
CAF4YKR036C YNR068CP53754 272 aa4.68□□□□□ -1.66
CAF4YKR036C TIM44Q01852 431 aa4.68□□□□□ -1.66
CAF4YKR036C RCR2Q03446 210 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C YDR131CQ03899 556 aa4.68□□□□□ -1.66
CAF4YKR036C YOR283WQ12040 230 aaKnown RBP4.68□□□□□ -1.66
CAF4YKR036C REC8Q12188 680 aa4.68□□□□□ -1.66
CAF4YKR036C ISN1Q99312 450 aa4.68□□□□□ -1.66
CAF4YKR036C TIM9O74700 87 aa4.67□□□□□ -1.66
CAF4YKR036C SPS2P08459 502 aa4.67□□□□□ -1.66
CAF4YKR036C CDC23P16522 626 aa4.67□□□□□ -1.66
CAF4YKR036C HCM1P25364 564 aa4.67□□□□□ -1.66
CAF4YKR036C ISC10P32645 267 aa4.67□□□□□ -1.66
CAF4YKR036C YKL097CP34245 136 aa4.67□□□□□ -1.66
CAF4YKR036C QNS1P38795 714 aaKnown RBP4.67□□□□□ -1.66
CAF4YKR036C PPE1P38796 400 aa4.67□□□□□ -1.66
CAF4YKR036C FET3P38993 636 aa4.67□□□□□ -1.66
CAF4YKR036C ERG10P41338 398 aaKnown RBP4.67□□□□□ -1.66
CAF4YKR036C GNA1P43577 159 aaPredicted RBP4.67□□□□□ -1.66
CAF4YKR036C PTR3P43606 678 aa4.67□□□□□ -1.66
CAF4YKR036C ZAP1P47043 880 aa4.67□□□□□ -1.66
CAF4YKR036C YJL043WP47053 257 aa4.67□□□□□ -1.66
CAF4YKR036C MPS3P47069 682 aa4.67□□□□□ -1.66
CAF4YKR036C NIT3P49954 291 aa4.67□□□□□ -1.66
CAF4YKR036C TAM41P53230 385 aa4.67□□□□□ -1.66
CAF4YKR036C NRD1P53617 575 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
CAF4YKR036C YNL181WP53878 407 aa4.67□□□□□ -1.66
CAF4YKR036C LSM7P53905 115 aaKnown RBP4.67□□□□□ -1.66
CAF4YKR036C GAS3Q03655 524 aa4.67□□□□□ -1.66
CAF4YKR036C RCO1Q04779 684 aa4.67□□□□□ -1.66
CAF4YKR036C CDC123Q05791 360 aa4.67□□□□□ -1.66
CAF4YKR036C SPO77Q06134 477 aa4.67□□□□□ -1.66
CAF4YKR036C YDL086WQ07505 273 aa4.67□□□□□ -1.66
CAF4YKR036C FRE3Q08905 711 aa4.67□□□□□ -1.66
CAF4YKR036C SLF1Q12034 447 aaKnown RBP4.67□□□□□ -1.66
CAF4YKR036C SAS5Q99314 248 aa4.67□□□□□ -1.66
CAF4YKR036C COX6P00427 148 aa4.66□□□□□ -1.66
CAF4YKR036C TRP3P00937 484 aa4.66□□□□□ -1.66
CAF4YKR036C ARG3P05150 338 aa4.66□□□□□ -1.66
CAF4YKR036C CIT2P08679 460 aa4.66□□□□□ -1.66
CAF4YKR036C ART10P18634 518 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C DAL81P21657 970 aa4.66□□□□□ -1.66
CAF4YKR036C PPH22P23595 377 aa4.66□□□□□ -1.66
CAF4YKR036C VMA16P23968 213 aa4.66□□□□□ -1.66
CAF4YKR036C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
CAF4YKR036C SYP1P25623 870 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C CYS3P31373 394 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C NDC1P32500 655 aa4.66□□□□□ -1.66
CAF4YKR036C NAB2P32505 525 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
CAF4YKR036C SDH3P33421 198 aa4.66□□□□□ -1.66
CAF4YKR036C ASK1P35734 292 aa4.66□□□□□ -1.66
CAF4YKR036C SRY1P36007 326 aa4.66□□□□□ -1.66
CAF4YKR036C MRPL37P36532 105 aa4.66□□□□□ -1.66
CAF4YKR036C RIB1P38066 345 aa4.66□□□□□ -1.66
CAF4YKR036C MMS4P38257 691 aa4.66□□□□□ -1.66
CAF4YKR036C COS111P38308 924 aa4.66□□□□□ -1.66
CAF4YKR036C FTH1P38310 465 aa4.66□□□□□ -1.66
CAF4YKR036C ERV15P38312 142 aa4.66□□□□□ -1.66
CAF4YKR036C NSG1P38837 291 aa4.66□□□□□ -1.66
CAF4YKR036C YHR182WP38870 785 aa4.66□□□□□ -1.66
CAF4YKR036C SCD6P45978 349 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
CAF4YKR036C NBP35P52920 328 aa4.66□□□□□ -1.66
CAF4YKR036C DOC1P53068 250 aa4.66□□□□□ -1.66
CAF4YKR036C MNT4P53745 580 aa4.66□□□□□ -1.66
CAF4YKR036C CAF120P53836 1060 aa4.66□□□□□ -1.66
CAF4YKR036C CWC21Q03375 135 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C GIC2Q06648 383 aa4.66□□□□□ -1.66
CAF4YKR036C YLL056CQ12177 298 aa4.66□□□□□ -1.66
CAF4YKR036C HMS1Q12398 434 aa4.66□□□□□ -1.66
CAF4YKR036C YKL018C-AQ3E7A7 99 aa4.66□□□□□ -1.66
CAF4YKR036C YCL001W-BQ96VH2 84 aa4.66□□□□□ -1.66
CAF4YKR036C ECM3Q99252 613 aa4.66□□□□□ -1.66
CAF4YKR036C FAB1P34756 2278 aa4.66□□□□□ -1.66
CAF4YKR036C THP2O13539 261 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C RPL25P04456 142 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C YER152CP10356 443 aa4.66□□□□□ -1.66
CAF4YKR036C ZWF1P11412 505 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C CKS1P20486 150 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C RPS1BP23248 255 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C MGR1P25573 417 aa4.66□□□□□ -1.66
CAF4YKR036C ERG9P29704 444 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms