RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	SPO24	Q3E752	67 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	RPL24A	P04449	155 aa	Known RBP	4.79	□□□□□ -1.64
UBP7	YIL156W	CDC36	P06100	191 aa	Predicted RBP	4.79	□□□□□ -1.64
UBP7	YIL156W	CDC21	P06785	304 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
UBP7	YIL156W	SHP1	P34223	423 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	SOR1	P35497	357 aa	Known RBP	4.79	□□□□□ -1.64
UBP7	YIL156W	YKR015C	P36111	568 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	PIH1	P38768	344 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	RRP4	P38792	359 aa	Known RBP	4.79	□□□□□ -1.64
UBP7	YIL156W	SPG5	P42933	373 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	SRL4	Q03085	281 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	PDR8	Q06149	701 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	SOR2	Q07786	357 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	PAA1	Q12447	191 aa	Known RBP	4.79	□□□□□ -1.64
UBP7	YIL156W	SNF2	P22082	1703 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	GAT2	P40209	560 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	TRF5	P48561	642 aa	Known RBP	4.79	□□□□□ -1.64
UBP7	YIL156W	GPN3	Q06543	272 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	RDR1	Q08904	546 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	RMD5	Q12508	421 aa		4.79	□□□□□ -1.64
UBP7	YIL156W	BNR1	P40450	1375 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	PCF11	P39081	626 aa	Predicted RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	PAC11	P40960	533 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	PMT6	P42934	759 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	RTN1	Q04947	295 aa	Known RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	THI72	Q08579	599 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	JIP3	O13555	125 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	RAP1	P11938	827 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	PRP21	P32524	280 aa	Predicted RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	TCM62	P38228	572 aa	Known RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	PRP39	P39682	629 aa	Known RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	CDC40	P40968	455 aa	Predicted RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	BNA6	P43619	295 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	KTR6	P54070	446 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	APM1	Q00776	475 aa	Predicted RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	SNZ1	Q03148	297 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	ECT1	P33412	323 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	YHR122W	P38829	231 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	BNA3	P47039	444 aa	Known RBP	4.78	□□□□□ -1.64
UBP7	YIL156W	BUL1	P48524	976 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	ATG4	P53867	494 aa		4.78	□□□□□ -1.64
UBP7	YIL156W	WHI2	P12611	486 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	OTU1	P43558	301 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	YNL260C	P53846	198 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	PFA5	Q03289	374 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	YDR262W	Q12331	272 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	CDC23	P16522	626 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	FUS3	P16892	353 aa	Known RBP	4.77	□□□□□ -1.65
UBP7	YIL156W	RPI1	P23250	407 aa	Known RBP	4.77	□□□□□ -1.65
UBP7	YIL156W	MRPL9	P31334	269 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	IMP3	P32899	183 aa	Predicted RBP	4.77	□□□□□ -1.65
UBP7	YIL156W	SPT20	P50875	604 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	ZPR1	P53303	486 aa	Known RBP	4.77	□□□□□ -1.65
UBP7	YIL156W	YPR003C	P53394	754 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	GTO3	Q04806	366 aa		4.77	□□□□□ -1.65
UBP7	YIL156W	RRP12	Q12754	1228 aa	Known RBP	4.77	□□□□□ -1.65
UBP7	YIL156W	ARG4	P04076	463 aa	Predicted RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	PMA1	P05030	918 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	DAL81	P21657	970 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	TKL1	P23254	680 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	RGT1	P32862	1170 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RPC25	P35718	212 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	STP2	P38704	541 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	INM1	P38710	295 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	PHO86	P46956	311 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	LOH1	P47055	219 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RIM8	P53179	542 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	YGR035C	P53222	116 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	DRN1	P53255	507 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	YGR117C	P53270	476 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	MRPL22	P53881	309 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	BSC6	Q08280	497 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RUP1	Q12242	671 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	AHA1	Q12449	350 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	BNA4	P38169	460 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	IML3	P38265	245 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RTC2	P38279	296 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	ARP1	P38696	384 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	FMC1	P40491	155 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	SNL1	P40548	159 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	YTP1	P53584	459 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RSN1	Q03516	953 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	TAF12	Q03761	539 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RTC1	Q08281	1341 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RPL18A	P0CX49	186 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	RPL18B	P0CX50	186 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	DAL2	P25335	343 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	RTT107	P38850	1070 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	CCT2	P39076	527 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	YIR014W	P40570	242 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	SAS2	P40963	338 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	SNG1	P46950	547 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	SHR3	Q02774	210 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	YMR087W	Q04299	284 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	GFD1	Q04839	188 aa	Known RBP	4.76	□□□□□ -1.65
UBP7	YIL156W	SYO1	Q07395	620 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	MCA1	Q08601	432 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	BTS1	Q12051	335 aa		4.76	□□□□□ -1.65
UBP7	YIL156W	CHS1	P08004	1131 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms