RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W CPR2P23285 205 aa2.03□□□□□ -2.08
VPS52YDR484W RVS161P25343 265 aaKnown RBP2.03□□□□□ -2.08
VPS52YDR484W CDC60P26637 1090 aaKnown RBP2.03□□□□□ -2.08
VPS52YDR484W NIP1P32497 812 aaKnown RBP2.03□□□□□ -2.08
VPS52YDR484W SLM4P38247 162 aa2.03□□□□□ -2.08
VPS52YDR484W RRT2P38332 387 aa2.03□□□□□ -2.08
VPS52YDR484W RRP4P38792 359 aaKnown RBP2.03□□□□□ -2.08
VPS52YDR484W SFH5P47008 294 aa2.03□□□□□ -2.08
VPS52YDR484W PHB2P50085 310 aa2.03□□□□□ -2.08
VPS52YDR484W RHO5P53879 331 aaKnown RBP2.03□□□□□ -2.08
VPS52YDR484W ADD37Q03233 198 aa2.03□□□□□ -2.08
VPS52YDR484W MMR1Q06324 491 aa2.03□□□□□ -2.08
VPS52YDR484W NDE2Q07500 545 aa2.03□□□□□ -2.08
VPS52YDR484W SRL2Q12020 392 aa2.03□□□□□ -2.08
VPS52YDR484W ADH2P00331 348 aaKnown RBP2.02□□□□□ -2.09
VPS52YDR484W ADE4P04046 510 aaKnown RBP2.02□□□□□ -2.09
VPS52YDR484W NFT1P0CE68 1218 aa2.02□□□□□ -2.09
VPS52YDR484W RAD57P25301 460 aa2.02□□□□□ -2.09
VPS52YDR484W ERV1P27882 189 aa2.02□□□□□ -2.09
VPS52YDR484W POP5P28005 173 aa2.02□□□□□ -2.09
VPS52YDR484W YBR056WP38081 501 aa2.02□□□□□ -2.09
VPS52YDR484W SWD3P38123 315 aa2.02□□□□□ -2.09
VPS52YDR484W MSG5P38590 489 aa2.02□□□□□ -2.09
VPS52YDR484W YGL039WP53183 348 aaKnown RBP2.02□□□□□ -2.09
VPS52YDR484W OCA2P53949 197 aa2.02□□□□□ -2.09
VPS52YDR484W URH1Q04179 340 aa2.02□□□□□ -2.09
VPS52YDR484W TPT1Q12272 230 aaKnown RBP2.02□□□□□ -2.09
VPS52YDR484W RPS8AP0CX39 200 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W RPS8BP0CX40 200 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W RRP1P35178 278 aaPredicted RBP2.01□□□□□ -2.09
VPS52YDR484W JLP2P40206 208 aa2.01□□□□□ -2.09
VPS52YDR484W ZIM17P42844 174 aa2.01□□□□□ -2.09
VPS52YDR484W TOM22P49334 152 aa2.01□□□□□ -2.09
VPS52YDR484W RPN9Q04062 393 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W YMR027WQ04371 470 aa2.01□□□□□ -2.09
VPS52YDR484W RRP9Q06506 573 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W IRC25Q07951 179 aa2.01□□□□□ -2.09
VPS52YDR484W AEP3Q12089 606 aa2.01□□□□□ -2.09
VPS52YDR484W RUP1Q12242 671 aa2.01□□□□□ -2.09
VPS52YDR484W YRM1Q12340 786 aa2.01□□□□□ -2.09
VPS52YDR484W SNU66Q12420 587 aaPredicted RBP2.01□□□□□ -2.09
VPS52YDR484W CYC3P06182 269 aa2.01□□□□□ -2.09
VPS52YDR484W MDH1P17505 334 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
VPS52YDR484W KAR9P32526 644 aa2.01□□□□□ -2.09
VPS52YDR484W ATP3P38077 311 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W OLA1P38219 394 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W VHS2P40463 436 aa2.01□□□□□ -2.09
VPS52YDR484W TCB2P48231 1178 aa2.01□□□□□ -2.09
VPS52YDR484W MTQ1P53944 314 aa2.01□□□□□ -2.09
VPS52YDR484W MMT1Q03218 510 aa2.01□□□□□ -2.09
VPS52YDR484W MHR1Q06630 226 aa2.01□□□□□ -2.09
VPS52YDR484W TMC1Q08422 150 aaPredicted RBP2.01□□□□□ -2.09
VPS52YDR484W FDH1Q08911 376 aa2.01□□□□□ -2.09
VPS52YDR484W WTM1Q12363 437 aaKnown RBP2.01□□□□□ -2.09
VPS52YDR484W CEX1Q12453 761 aa2.01□□□□□ -2.09
VPS52YDR484W YCL068CP25593 260 aa2□□□□□ -2.09
VPS52YDR484W MPE1P35728 441 aaKnown RBP2□□□□□ -2.09
VPS52YDR484W ASC1P38011 319 aaKnown RBP2□□□□□ -2.09
VPS52YDR484W CHK1P38147 527 aa2□□□□□ -2.09
VPS52YDR484W GAT2P40209 560 aa2□□□□□ -2.09
VPS52YDR484W YIL029CP40538 142 aa2□□□□□ -2.09
VPS52YDR484W YPS6P40583 537 aa2□□□□□ -2.09
VPS52YDR484W MDE1P47095 244 aa2□□□□□ -2.09
VPS52YDR484W YGR111WP53265 400 aa2□□□□□ -2.09
VPS52YDR484W SHY1P53266 389 aa2□□□□□ -2.09
VPS52YDR484W PRP42Q03776 544 aaKnown RBP2□□□□□ -2.09
VPS52YDR484W YLR345WQ06137 509 aa2□□□□□ -2.09
VPS52YDR484W RAX1Q08760 435 aa2□□□□□ -2.09
VPS52YDR484W RBD2Q12270 262 aa2□□□□□ -2.09
VPS52YDR484W NAM2P11325 894 aa1.99□□□□□ -2.09
VPS52YDR484W CYS4P32582 507 aaKnown RBP1.99□□□□□ -2.09
VPS52YDR484W SPR1P32603 445 aa1.99□□□□□ -2.09
VPS52YDR484W SRP72P38688 640 aaKnown RBP1.99□□□□□ -2.09
VPS52YDR484W BRO1P48582 844 aa1.99□□□□□ -2.09
VPS52YDR484W YLR152CP54072 576 aa1.99□□□□□ -2.09
VPS52YDR484W NUP116Q02630 1113 aa1.99□□□□□ -2.09
VPS52YDR484W STD1Q02794 444 aa1.99□□□□□ -2.09
VPS52YDR484W AIM32Q04689 311 aa1.99□□□□□ -2.09
VPS52YDR484W SMC6Q12749 1114 aa1.99□□□□□ -2.09
VPS52YDR484W IMA3P0CW40 589 aa1.99□□□□□ -2.09
VPS52YDR484W IMA4P0CW41 589 aa1.99□□□□□ -2.09
VPS52YDR484W HSP104P31539 908 aaKnown RBP1.99□□□□□ -2.09
VPS52YDR484W ZTA1P38230 334 aaKnown RBP1.99□□□□□ -2.09
VPS52YDR484W COX14P39103 70 aa1.99□□□□□ -2.09
VPS52YDR484W SER3P40054 469 aa1.99□□□□□ -2.09
VPS52YDR484W BUD27P43573 796 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
VPS52YDR484W ALF1P53904 254 aa1.99□□□□□ -2.09
VPS52YDR484W CCE1Q03702 353 aa1.99□□□□□ -2.09
VPS52YDR484W IMA2Q08295 589 aa1.99□□□□□ -2.09
VPS52YDR484W DCI1Q08558 271 aa1.99□□□□□ -2.09
VPS52YDR484W COX3P00420 269 aa1.98□□□□□ -2.09
VPS52YDR484W DST1P07273 309 aa1.98□□□□□ -2.09
VPS52YDR484W RIM1P32445 135 aaKnown RBP1.98□□□□□ -2.09
VPS52YDR484W LTV1P34078 463 aa1.98□□□□□ -2.09
VPS52YDR484W PXA2P34230 853 aa1.98□□□□□ -2.09
VPS52YDR484W YER079WP40052 210 aaKnown RBP1.98□□□□□ -2.09
VPS52YDR484W YML6P51998 286 aa1.98□□□□□ -2.09
VPS52YDR484W PIB2P53191 635 aa1.98□□□□□ -2.09
VPS52YDR484W CIK1Q01649 594 aa1.98□□□□□ -2.09
VPS52YDR484W ADA2Q02336 434 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms