RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C SPO12P17123 173 aa4.45□□□□□ -1.7
LSM6YDR378C CPR4P25334 318 aa4.45□□□□□ -1.7
LSM6YDR378C HSP104P31539 908 aaKnown RBP4.45□□□□□ -1.7
LSM6YDR378C CYS4P32582 507 aaKnown RBP4.45□□□□□ -1.7
LSM6YDR378C YIL067CP40514 678 aa4.45□□□□□ -1.7
LSM6YDR378C EFM4P40516 257 aa4.45□□□□□ -1.7
LSM6YDR378C NCA3P46955 337 aa4.45□□□□□ -1.7
LSM6YDR378C BRO1P48582 844 aa4.45□□□□□ -1.7
LSM6YDR378C HXT11P54862 567 aa4.45□□□□□ -1.7
LSM6YDR378C HHF1P02309 103 aaKnown RBP4.44□□□□□ -1.7
LSM6YDR378C HSP82P02829 709 aaKnown RBP4.44□□□□□ -1.7
LSM6YDR378C RPL1AP0CX43 217 aaKnown RBP4.44□□□□□ -1.7
LSM6YDR378C RPL1BP0CX44 217 aaKnown RBP4.44□□□□□ -1.7
LSM6YDR378C DEG1P31115 442 aaKnown RBP4.44□□□□□ -1.7
LSM6YDR378C YPS6P40583 537 aa4.44□□□□□ -1.7
LSM6YDR378C AZR1P50080 613 aa4.44□□□□□ -1.7
LSM6YDR378C MMT1Q03218 510 aa4.44□□□□□ -1.7
LSM6YDR378C PBA1Q05778 276 aa4.44□□□□□ -1.7
LSM6YDR378C SNU66Q12420 587 aaPredicted RBP4.44□□□□□ -1.7
LSM6YDR378C MUD1P32605 298 aaKnown RBP4.43□□□□□ -1.7
LSM6YDR378C PAD1P33751 242 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
LSM6YDR378C YBL059WP34224 193 aa4.43□□□□□ -1.7
LSM6YDR378C BLI1P35727 113 aa4.43□□□□□ -1.7
LSM6YDR378C ATP3P38077 311 aaKnown RBP4.43□□□□□ -1.7
LSM6YDR378C NDT80P38830 627 aa4.43□□□□□ -1.7
LSM6YDR378C YER079WP40052 210 aaKnown RBP4.43□□□□□ -1.7
LSM6YDR378C SEC28P40509 296 aaKnown RBP4.43□□□□□ -1.7
LSM6YDR378C STD1Q02794 444 aa4.43□□□□□ -1.7
LSM6YDR378C YDR341CQ05506 607 aaKnown RBP4.43□□□□□ -1.7
LSM6YDR378C RRP9Q06506 573 aaKnown RBP4.43□□□□□ -1.7
LSM6YDR378C SRL2Q12020 392 aa4.43□□□□□ -1.7
LSM6YDR378C CDC21P06785 304 aa4.42□□□□□ -1.7
LSM6YDR378C IMA3P0CW40 589 aa4.42□□□□□ -1.7
LSM6YDR378C IMA4P0CW41 589 aa4.42□□□□□ -1.7
LSM6YDR378C SPT15P13393 240 aaKnown RBP4.42□□□□□ -1.7
LSM6YDR378C ALG1P16661 449 aa4.42□□□□□ -1.7
LSM6YDR378C RGT1P32862 1170 aa4.42□□□□□ -1.7
LSM6YDR378C STN1P38960 494 aa4.42□□□□□ -1.7
LSM6YDR378C TOF1P53840 1238 aa4.42□□□□□ -1.7
LSM6YDR378C TSR1Q07381 788 aaKnown RBP4.42□□□□□ -1.7
LSM6YDR378C IMA2Q08295 589 aa4.42□□□□□ -1.7
LSM6YDR378C DST1P07273 309 aa4.41□□□□□ -1.7
LSM6YDR378C PRM5P40476 318 aa4.41□□□□□ -1.7
LSM6YDR378C SFH5P47008 294 aa4.41□□□□□ -1.7
LSM6YDR378C RHO5P53879 331 aaKnown RBP4.41□□□□□ -1.7
LSM6YDR378C PEX25Q02969 394 aa4.41□□□□□ -1.7
LSM6YDR378C SNT309Q06091 175 aaPredicted RBP4.41□□□□□ -1.7
LSM6YDR378C YOR387CQ08910 206 aa4.41□□□□□ -1.7
LSM6YDR378C TPT1Q12272 230 aaKnown RBP4.41□□□□□ -1.7
LSM6YDR378C RRP7P25368 297 aaPredicted RBP4.4□□□□□ -1.71
LSM6YDR378C PHO91P27514 894 aa4.4□□□□□ -1.71
LSM6YDR378C INM1P38710 295 aa4.4□□□□□ -1.71
LSM6YDR378C PTH1P38876 190 aaKnown RBP4.4□□□□□ -1.71
LSM6YDR378C ELP3Q02908 557 aaKnown RBP4.4□□□□□ -1.71
LSM6YDR378C HER2Q03557 464 aa4.4□□□□□ -1.71
LSM6YDR378C SCW10Q04951 389 aa4.4□□□□□ -1.71
LSM6YDR378C BCH1Q05029 724 aa4.4□□□□□ -1.71
LSM6YDR378C NSE1Q07913 336 aa4.4□□□□□ -1.71
LSM6YDR378C RXT2P38255 430 aa4.39□□□□□ -1.71
LSM6YDR378C YBR137WP38276 179 aa4.39□□□□□ -1.71
LSM6YDR378C YPI1P43587 155 aa4.39□□□□□ -1.71
LSM6YDR378C YGL242CP53066 181 aa4.39□□□□□ -1.71
LSM6YDR378C ROG1P53118 685 aa4.39□□□□□ -1.71
LSM6YDR378C NDE2Q07500 545 aa4.39□□□□□ -1.71
LSM6YDR378C ERV2Q12284 196 aa4.39□□□□□ -1.71
LSM6YDR378C YCL068CP25593 260 aa4.38□□□□□ -1.71
LSM6YDR378C PUP2P32379 260 aa4.38□□□□□ -1.71
LSM6YDR378C SWI3P32591 825 aa4.38□□□□□ -1.71
LSM6YDR378C MNS1P32906 549 aa4.38□□□□□ -1.71
LSM6YDR378C RRP1P35178 278 aaPredicted RBP4.38□□□□□ -1.71
LSM6YDR378C YBR139WP38109 508 aa4.38□□□□□ -1.71
LSM6YDR378C AVT5P38176 459 aa4.38□□□□□ -1.71
LSM6YDR378C PFF1P38244 976 aa4.38□□□□□ -1.71
LSM6YDR378C GPI16P38875 610 aa4.38□□□□□ -1.71
LSM6YDR378C MMF1P40185 145 aaKnown RBP4.38□□□□□ -1.71
LSM6YDR378C NDL1Q06568 189 aa4.38□□□□□ -1.71
LSM6YDR378C NFT1P0CE68 1218 aa4.37□□□□□ -1.71
LSM6YDR378C ARO2P28777 376 aaKnown RBP4.37□□□□□ -1.71
LSM6YDR378C NRP1P32770 719 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
LSM6YDR378C SKN1P33336 771 aa4.37□□□□□ -1.71
LSM6YDR378C CHK1P38147 527 aa4.37□□□□□ -1.71
LSM6YDR378C JLP2P40206 208 aa4.37□□□□□ -1.71
LSM6YDR378C CWC25P53854 179 aaKnown RBP4.37□□□□□ -1.71
LSM6YDR378C YDR541CQ03049 344 aa4.37□□□□□ -1.71
LSM6YDR378C CCE1Q03702 353 aa4.37□□□□□ -1.71
LSM6YDR378C TLG2Q08144 397 aa4.37□□□□□ -1.71
LSM6YDR378C NCA2Q12374 616 aa4.37□□□□□ -1.71
LSM6YDR378C CEX1Q12453 761 aa4.37□□□□□ -1.71
LSM6YDR378C TRP1P00912 224 aa4.36□□□□□ -1.71
LSM6YDR378C RPL6BP05739 176 aaKnown RBP4.36□□□□□ -1.71
LSM6YDR378C ATP1P07251 545 aaKnown RBP4.36□□□□□ -1.71
LSM6YDR378C NAM9P27929 486 aa4.36□□□□□ -1.71
LSM6YDR378C WSS1P38838 269 aa4.36□□□□□ -1.71
LSM6YDR378C PAC11P40960 533 aa4.36□□□□□ -1.71
LSM6YDR378C EPL1P43572 832 aa4.36□□□□□ -1.71
LSM6YDR378C TOS3P43637 560 aa4.36□□□□□ -1.71
LSM6YDR378C MLC1P53141 149 aa4.36□□□□□ -1.71
LSM6YDR378C MTM1P53320 366 aa4.36□□□□□ -1.71
LSM6YDR378C RPL6AQ02326 176 aaKnown RBP4.36□□□□□ -1.71
LSM6YDR378C RAX1Q08760 435 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms