RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C ELP3Q02908 557 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C PRM6Q04705 352 aa3.24□□□□□ -1.89
CDC40YDR364C RBS1Q05672 457 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C KAP95Q06142 861 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C ECM30Q06673 1274 aa3.24□□□□□ -1.89
CDC40YDR364C DDC1Q08949 612 aa3.24□□□□□ -1.89
CDC40YDR364C PKH2Q12236 1081 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C INP53Q12271 1107 aa3.24□□□□□ -1.89
CDC40YDR364C SEC39Q12745 709 aa3.24□□□□□ -1.89
CDC40YDR364C SEY1Q99287 776 aa3.24□□□□□ -1.89
CDC40YDR364C RPL6BP05739 176 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C ILV2P07342 687 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C RPL1AP0CX43 217 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C RPL1BP0CX44 217 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C ART10P18634 518 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C MGT1P26188 188 aa3.23□□□□□ -1.89
CDC40YDR364C MEI4P29467 408 aa3.23□□□□□ -1.89
CDC40YDR364C TKL2P33315 681 aa3.23□□□□□ -1.89
CDC40YDR364C SEC66P33754 206 aa3.23□□□□□ -1.89
CDC40YDR364C CAB3P36076 571 aa3.23□□□□□ -1.89
CDC40YDR364C TUL1P36096 758 aa3.23□□□□□ -1.89
CDC40YDR364C DUG2P38149 878 aa3.23□□□□□ -1.89
CDC40YDR364C SLM4P38247 162 aa3.23□□□□□ -1.89
CDC40YDR364C NTC20P38302 140 aaPredicted RBP3.23□□□□□ -1.89
CDC40YDR364C SLX1P38324 304 aa3.23□□□□□ -1.89
CDC40YDR364C CCT2P39076 527 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C ECM10P39987 644 aa3.23□□□□□ -1.89
CDC40YDR364C YFL040WP43562 540 aa3.23□□□□□ -1.89
CDC40YDR364C YFR020WP43600 232 aa3.23□□□□□ -1.89
CDC40YDR364C YJR079WP47126 109 aa3.23□□□□□ -1.89
CDC40YDR364C YGR149WP48236 432 aa3.23□□□□□ -1.89
CDC40YDR364C RHO5P53879 331 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C SLG1P54867 378 aa3.23□□□□□ -1.89
CDC40YDR364C RPL6AQ02326 176 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C SHR3Q02774 210 aa3.23□□□□□ -1.89
CDC40YDR364C HOT1Q03213 719 aa3.23□□□□□ -1.89
CDC40YDR364C FIN1Q03898 291 aa3.23□□□□□ -1.89
CDC40YDR364C YDR179W-AQ03983 463 aa3.23□□□□□ -1.89
CDC40YDR364C PLM2Q04383 521 aa3.23□□□□□ -1.89
CDC40YDR364C YMR111CQ04461 462 aaPredicted RBP3.23□□□□□ -1.89
CDC40YDR364C TAF9Q05027 157 aa3.23□□□□□ -1.89
CDC40YDR364C RRP9Q06506 573 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C APC5Q08683 685 aa3.23□□□□□ -1.89
CDC40YDR364C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
CDC40YDR364C GPM2Q12008 311 aa3.23□□□□□ -1.89
CDC40YDR364C LEU9Q12166 604 aaKnown RBP3.23□□□□□ -1.89
CDC40YDR364C YDR061WQ12298 539 aa3.23□□□□□ -1.89
CDC40YDR364C FRE7Q12333 620 aa3.23□□□□□ -1.89
CDC40YDR364C IZH4Q99393 312 aa3.23□□□□□ -1.89
CDC40YDR364C QCR6P00127 147 aa3.22□□□□□ -1.89
CDC40YDR364C HIP1P06775 603 aa3.22□□□□□ -1.89
CDC40YDR364C PEP5P12868 1029 aa3.22□□□□□ -1.89
CDC40YDR364C SPB1P25582 841 aaPredicted RBP3.22□□□□□ -1.89
CDC40YDR364C RML2P32611 393 aa3.22□□□□□ -1.89
CDC40YDR364C HMT1P38074 348 aa3.22□□□□□ -1.89
CDC40YDR364C THI2P38141 450 aa3.22□□□□□ -1.89
CDC40YDR364C YPT10P38146 199 aa3.22□□□□□ -1.89
CDC40YDR364C VBA2P38358 474 aaKnown RBP3.22□□□□□ -1.89
CDC40YDR364C MSR1P38714 643 aa3.22□□□□□ -1.89
CDC40YDR364C UIP3P39547 235 aa3.22□□□□□ -1.89
CDC40YDR364C SMX2P40204 77 aaKnown RBP3.22□□□□□ -1.89
CDC40YDR364C OPT1P40897 799 aa3.22□□□□□ -1.89
CDC40YDR364C URB2P47108 1174 aa3.22□□□□□ -1.89
CDC40YDR364C PEX31P53203 462 aa3.22□□□□□ -1.89
CDC40YDR364C CPR8P53728 308 aa3.22□□□□□ -1.89
CDC40YDR364C YNR068CP53754 272 aa3.22□□□□□ -1.89
CDC40YDR364C YNL092WP53934 400 aa3.22□□□□□ -1.89
CDC40YDR364C KTR5P53966 522 aaPredicted RBP3.22□□□□□ -1.89
CDC40YDR364C EFM6P53970 246 aa3.22□□□□□ -1.89
CDC40YDR364C MRS2Q01926 470 aa3.22□□□□□ -1.89
CDC40YDR364C RRP45Q05636 305 aaKnown RBP3.22□□□□□ -1.89
CDC40YDR364C HRD3Q05787 833 aa3.22□□□□□ -1.89
CDC40YDR364C SFH1Q06168 426 aa3.22□□□□□ -1.89
CDC40YDR364C PML1Q07930 204 aaPredicted RBP3.22□□□□□ -1.89
CDC40YDR364C YLL056CQ12177 298 aa3.22□□□□□ -1.89
CDC40YDR364C LCB4Q12246 624 aa3.22□□□□□ -1.89
CDC40YDR364C MDY2Q12285 212 aa3.22□□□□□ -1.89
CDC40YDR364C HRT3Q12347 344 aa3.22□□□□□ -1.89
CDC40YDR364C AHA1Q12449 350 aaKnown RBP3.22□□□□□ -1.89
CDC40YDR364C RRD2Q12461 358 aa3.22□□□□□ -1.89
CDC40YDR364C PAB1P04147 577 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
CDC40YDR364C CMD1P06787 147 aaKnown RBP3.21□□□□□ -1.9
CDC40YDR364C ATP1P07251 545 aaKnown RBP3.21□□□□□ -1.9
CDC40YDR364C MAS1P10507 462 aa3.21□□□□□ -1.9
CDC40YDR364C HEM15P16622 393 aa3.21□□□□□ -1.9
CDC40YDR364C CBF1P17106 351 aa3.21□□□□□ -1.9
CDC40YDR364C BOS1P25385 244 aa3.21□□□□□ -1.9
CDC40YDR364C TPS2P31688 896 aaKnown RBP3.21□□□□□ -1.9
CDC40YDR364C RAD5P32849 1169 aaPredicted RBP3.21□□□□□ -1.9
CDC40YDR364C YBR056WP38081 501 aa3.21□□□□□ -1.9
CDC40YDR364C YSW1P38280 609 aa3.21□□□□□ -1.9
CDC40YDR364C SPC97P38863 823 aa3.21□□□□□ -1.9
CDC40YDR364C AIM18P38884 321 aa3.21□□□□□ -1.9
CDC40YDR364C VPS41P38959 992 aa3.21□□□□□ -1.9
CDC40YDR364C ELO1P39540 310 aa3.21□□□□□ -1.9
CDC40YDR364C RTT105P40063 208 aa3.21□□□□□ -1.9
CDC40YDR364C SCC4P40090 624 aa3.21□□□□□ -1.9
CDC40YDR364C OSW5P40219 148 aa3.21□□□□□ -1.9
CDC40YDR364C CDC1P40986 491 aa3.21□□□□□ -1.9
CDC40YDR364C VMA13P41807 478 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms