RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W COX16P47081 118 aa5.49□□□□□ -1.53
VMS1YDR049W TAF6P53040 516 aa5.49□□□□□ -1.53
VMS1YDR049W IMO32P53219 342 aa5.49□□□□□ -1.53
VMS1YDR049W COX18P53239 316 aa5.49□□□□□ -1.53
VMS1YDR049W NOP19P53317 196 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W MTQ1P53944 314 aa5.49□□□□□ -1.53
VMS1YDR049W YAT1P80235 687 aa5.49□□□□□ -1.53
VMS1YDR049W GCN5Q03330 439 aa5.49□□□□□ -1.53
VMS1YDR049W IZH1Q03419 316 aa5.49□□□□□ -1.53
VMS1YDR049W USA1Q03714 838 aa5.49□□□□□ -1.53
VMS1YDR049W AFT2Q08957 416 aa5.49□□□□□ -1.53
VMS1YDR049W DAP1Q12091 152 aa5.49□□□□□ -1.53
VMS1YDR049W ZPS1Q12512 249 aa5.49□□□□□ -1.53
VMS1YDR049W SPE1P08432 466 aa5.48□□□□□ -1.53
VMS1YDR049W RPL18AP0CX49 186 aaKnown RBP5.48□□□□□ -1.53
VMS1YDR049W RPL18BP0CX50 186 aaKnown RBP5.48□□□□□ -1.53
VMS1YDR049W IMG1P25626 169 aa5.48□□□□□ -1.53
VMS1YDR049W CSM1P25651 190 aa5.48□□□□□ -1.53
VMS1YDR049W RFA2P26754 273 aaKnown RBP5.48□□□□□ -1.53
VMS1YDR049W DTR1P38125 572 aa5.48□□□□□ -1.53
VMS1YDR049W RTC2P38279 296 aa5.48□□□□□ -1.53
VMS1YDR049W CTF8P38877 133 aa5.48□□□□□ -1.53
VMS1YDR049W YER121WP40076 114 aa5.48□□□□□ -1.53
VMS1YDR049W PFA3P42836 336 aa5.48□□□□□ -1.53
VMS1YDR049W FAR3P46671 204 aa5.48□□□□□ -1.53
VMS1YDR049W MSE1P48525 536 aa5.48□□□□□ -1.53
VMS1YDR049W AMA1P50082 593 aa5.48□□□□□ -1.53
VMS1YDR049W YDC1Q02896 317 aa5.48□□□□□ -1.53
VMS1YDR049W IRC4Q03036 179 aa5.48□□□□□ -1.53
VMS1YDR049W RIM13Q03792 727 aa5.48□□□□□ -1.53
VMS1YDR049W HOF1Q05080 669 aa5.48□□□□□ -1.53
VMS1YDR049W YPR147CQ06522 304 aaKnown RBP5.48□□□□□ -1.53
VMS1YDR049W MCM21Q06675 368 aa5.48□□□□□ -1.53
VMS1YDR049W YFT2Q06676 274 aa5.48□□□□□ -1.53
VMS1YDR049W POM34Q12445 299 aa5.48□□□□□ -1.53
VMS1YDR049W RMD5Q12508 421 aa5.48□□□□□ -1.53
VMS1YDR049W ATP1P07251 545 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W GDH1P07262 454 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W PRE10P21242 288 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
VMS1YDR049W PUP3P25451 205 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W DEG1P31115 442 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W CAF4P36130 643 aa5.47□□□□□ -1.53
VMS1YDR049W YPK3P38070 525 aa5.47□□□□□ -1.53
VMS1YDR049W DUG2P38149 878 aa5.47□□□□□ -1.53
VMS1YDR049W RFT1P38206 574 aaPredicted RBP5.47□□□□□ -1.53
VMS1YDR049W GPI16P38875 610 aa5.47□□□□□ -1.53
VMS1YDR049W FET3P38993 636 aa5.47□□□□□ -1.53
VMS1YDR049W MSS4P38994 779 aa5.47□□□□□ -1.53
VMS1YDR049W ERG28P40030 148 aa5.47□□□□□ -1.53
VMS1YDR049W SDP1P40479 209 aa5.47□□□□□ -1.53
VMS1YDR049W AGP3P43548 558 aa5.47□□□□□ -1.53
VMS1YDR049W MSC2Q03455 724 aa5.47□□□□□ -1.53
VMS1YDR049W YLR346CQ06139 101 aa5.47□□□□□ -1.53
VMS1YDR049W POS5Q06892 414 aa5.47□□□□□ -1.53
VMS1YDR049W SYO1Q07395 620 aa5.47□□□□□ -1.53
VMS1YDR049W TPO1Q07824 586 aa5.47□□□□□ -1.53
VMS1YDR049W PEX27Q08580 376 aa5.47□□□□□ -1.53
VMS1YDR049W SLF1Q12034 447 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W ELG1Q12050 791 aa5.47□□□□□ -1.53
VMS1YDR049W STH1P32597 1359 aa5.47□□□□□ -1.53
VMS1YDR049W SCC2Q04002 1493 aa5.47□□□□□ -1.53
VMS1YDR049W SWI1P09547 1314 aa5.47□□□□□ -1.53
VMS1YDR049W ADH2P00331 348 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W COX3P00420 269 aa5.47□□□□□ -1.53
VMS1YDR049W YPT1P01123 206 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W QCR2P07257 368 aa5.47□□□□□ -1.53
VMS1YDR049W ELM1P32801 640 aa5.47□□□□□ -1.53
VMS1YDR049W LIP5P32875 414 aa5.47□□□□□ -1.53
VMS1YDR049W CSE1P33307 960 aa5.47□□□□□ -1.53
VMS1YDR049W YOX1P34161 385 aa5.47□□□□□ -1.53
VMS1YDR049W IMD2P38697 523 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W DIA4P38705 446 aaPredicted RBP5.47□□□□□ -1.53
VMS1YDR049W OSH3P38713 996 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W YER130CP39959 443 aa5.47□□□□□ -1.53
VMS1YDR049W SNG1P46950 547 aa5.47□□□□□ -1.53
VMS1YDR049W TAX4P47030 604 aa5.47□□□□□ -1.53
VMS1YDR049W NPA3P47122 385 aa5.47□□□□□ -1.53
VMS1YDR049W YPT11P48559 417 aa5.47□□□□□ -1.53
VMS1YDR049W STB4P50104 949 aa5.47□□□□□ -1.53
VMS1YDR049W YGR042WP53227 271 aa5.47□□□□□ -1.53
VMS1YDR049W DOT1Q04089 582 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W DUS4Q06063 367 aa5.47□□□□□ -1.53
VMS1YDR049W ARR3Q06598 404 aa5.47□□□□□ -1.53
VMS1YDR049W YOR365CQ08844 703 aa5.47□□□□□ -1.53
VMS1YDR049W PKH2Q12236 1081 aaKnown RBP5.47□□□□□ -1.53
VMS1YDR049W POL1P13382 1468 aa5.47□□□□□ -1.53
VMS1YDR049W RPS24AP0CX31 135 aaKnown RBP5.46□□□□□ -1.54
VMS1YDR049W RPS24BP0CX32 135 aaKnown RBP5.46□□□□□ -1.54
VMS1YDR049W DSS4P32601 143 aa5.46□□□□□ -1.54
VMS1YDR049W MIC12P38341 106 aa5.46□□□□□ -1.54
VMS1YDR049W OSH7P38755 437 aa5.46□□□□□ -1.54
VMS1YDR049W PTC7P38797 343 aa5.46□□□□□ -1.54
VMS1YDR049W RPH1P39956 796 aa5.46□□□□□ -1.54
VMS1YDR049W PHB1P40961 287 aa5.46□□□□□ -1.54
VMS1YDR049W MRX5P47007 382 aa5.46□□□□□ -1.54
VMS1YDR049W LSC2P53312 427 aa5.46□□□□□ -1.54
VMS1YDR049W YIP3P53633 176 aa5.46□□□□□ -1.54
VMS1YDR049W MPS1P54199 764 aa5.46□□□□□ -1.54
VMS1YDR049W UBP16Q02863 499 aa5.46□□□□□ -1.54
VMS1YDR049W SSY1Q03770 852 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms