RNA–Protein interactions for RNA: YBR035C

PDX3, Transcript of Pyridoxine (pyridoxamine) phosphate oxidase, yeast

Gene PDX3, Length 687 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX3	YBR035C	SAP1	P39955	897 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	YJL107C	P42947	387 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	LOC1	P43586	204 aa	Predicted RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	YFR020W	P43600	232 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PDX3	YBR035C	ABM1	P47146	123 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	TOM22	P49334	152 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	HSH155	P49955	971 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	PXR1	P53335	271 aa	Predicted RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	YNL134C	P53912	376 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	AQR1	P53943	586 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	YMR130W	Q04223	302 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	PLM2	Q04383	521 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	EMI2	Q04409	500 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	KAP95	Q06142	861 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	HBT1	Q07653	1046 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	MED2	Q12124	431 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	UBX3	Q12229	455 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	Q0010	Q9ZZX9	128 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	RPL31B	P0C2H9	113 aa	Known RBP	4.59	□□□□□ -1.67
PDX3	YBR035C	DBP3	P20447	523 aa	Known RBP	4.59	□□□□□ -1.67
PDX3	YBR035C	ERG4	P25340	473 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	BOS1	P25385	244 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	PHO91	P27514	894 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	YIM1	P28625	365 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	YBL055C	P34220	418 aa	Predicted RBP	4.59	□□□□□ -1.67
PDX3	YBR035C	RRP1	P35178	278 aa	Predicted RBP	4.59	□□□□□ -1.67
PDX3	YBR035C	MRPL4	P36517	319 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	YDR089W	P38966	869 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	YER186C	P40101	306 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	YRB2	P40517	327 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	IAH1	P41734	238 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	PMT6	P42934	759 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	RPN9	Q04062	393 aa	Known RBP	4.59	□□□□□ -1.67
PDX3	YBR035C	TEN1	Q07921	160 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	CMC2	Q3E7A4	109 aa		4.59	□□□□□ -1.67
PDX3	YBR035C	ARG81	P05085	880 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	STE3	P06783	470 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	SPS4	P09937	338 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	ASP3-2	P0CX77	362 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	ASP3-3	P0CX78	362 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	ASP3-4	P0CX79	362 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	ASP3-1	P0CZ17	362 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	TAL1	P15019	335 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	SPO11	P23179	398 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	RPI1	P23250	407 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	PRR1	P28708	518 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	LIP5	P32875	414 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	CSE2	P33308	149 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	TRM2	P33753	639 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	NUF2	P33895	451 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	YPT52	P36018	234 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	TCD1	P38756	429 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	MMF1	P40185	145 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	ALK1	P43633	760 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	MNN10	P50108	393 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	COQ6	P53318	479 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	ALG11	P53954	548 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	SNU56	Q03782	492 aa	Known RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	YMR160W	Q03823	816 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	YDR179W-A	Q03983	463 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	YLR297W	Q05899	129 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	VAC14	Q06708	880 aa		4.58	□□□□□ -1.68
PDX3	YBR035C	PFK27	Q12471	397 aa	Predicted RBP	4.58	□□□□□ -1.68
PDX3	YBR035C	TDH1	P00360	332 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	CAR2	P07991	424 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	FUS3	P16892	353 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	CDC42	P19073	191 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	PHO13	P19881	312 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	BUD5	P25300	642 aa	Predicted RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	RSA4	P25382	515 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	RAD14	P28519	371 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	MRPL9	P31334	269 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	TPS2	P31688	896 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	MSN4	P33749	630 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	RPL32	P38061	130 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	ARA1	P38115	344 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	APD1	P38281	316 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	POP7	P38291	140 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	IMD2	P38697	523 aa	Known RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	SMF2	P38778	549 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	RTC3	P38804	111 aa	Predicted RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	RTT107	P38850	1070 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	FAD1	P38913	306 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	CIN4	P39110	191 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	ARG2	P40360	574 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	OPT1	P40897	799 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	TFG2	P41896	400 aa	Predicted RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	CPR7	P47103	393 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	RNT1	Q02555	471 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	IVY1	Q04934	453 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	DCS1	Q06151	350 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	YLR455W	Q06188	304 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	YFH1	Q07540	174 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	YOL159C	Q08300	171 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	DNL4	Q08387	944 aa	Predicted RBP	4.57	□□□□□ -1.68
PDX3	YBR035C	VIK1	Q12045	647 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	RBD2	Q12270	262 aa		4.57	□□□□□ -1.68
PDX3	YBR035C	SEN1	Q00416	2231 aa	Known RBP	4.56	□□□□□ -1.68
PDX3	YBR035C	PDE2	P06776	526 aa		4.56	□□□□□ -1.68

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