RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	CDC10	P25342	322 aa	Known RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	YCL068C	P25593	260 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	ADY2	P25613	283 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	DEP1	P31385	405 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	MVD1	P32377	396 aa	Known RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	YBR144C	P34215	104 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	KDX1	P36005	433 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	YMC2	P38087	329 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	YBR139W	P38109	508 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	SPP381	P38282	291 aa	Predicted RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	DIA4	P38705	446 aa	Predicted RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	YHR045W	P38775	560 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	YER085C	P40058	173 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	TMN3	P40071	706 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	LCP5	P40079	357 aa	Predicted RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	SCC4	P40090	624 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	MND2	P40577	368 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	FAR3	P46671	204 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	UBX6	P47049	396 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	MRK1	P50873	501 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	IMO32	P53219	342 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	YGR079W	P53249	370 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	RTT102	P53330	157 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	DIG1	Q03063	452 aa	Known RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	SMA2	Q04658	369 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	YDR222W	Q04925	415 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	SFH1	Q06168	426 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	ARR3	Q06598	404 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	SRN2	Q99176	213 aa		3.53	□□□□□ -1.84
YAL004W	YAL004W	HRP1	Q99383	534 aa	Known RBP	3.53	□□□□□ -1.84
YAL004W	YAL004W	BI2	P03873	423 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	TUB3	P09734	445 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	SPS4	P09937	338 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	CDC23	P16522	626 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	DAL81	P21657	970 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YCR016W	P25617	290 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	YIM1	P28625	365 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	RIM1	P32445	135 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	SPR1	P32603	445 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	TMT1	P32643	299 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	SHP1	P34223	423 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	MRX3	P38172	270 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	HIS2	P38635	335 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	RCY1	P39531	840 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	GET2	P40056	285 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	SNM1	P40993	198 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YNL320W	P42840	284 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	BNA6	P43619	295 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	CPR7	P47103	393 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	RFX1	P48743	811 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	TOM22	P49334	152 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	HSH155	P49955	971 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	YGL039W	P53183	348 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	TIM21	P53220	239 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YGR127W	P53275	312 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YNL146W	P53906	100 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	EFM6	P53970	246 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	KTR6	P54070	446 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	MUK1	Q02866	612 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	SRL4	Q03085	281 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	NRG1	Q03125	231 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	RSN1	Q03516	953 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	EKI1	Q03764	534 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	CAB5	Q03941	241 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	CTK1	Q03957	528 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	UFO1	Q04511	668 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YMR321C	Q04898	105 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	RRG8	Q06109	277 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	GPN3	Q06543	272 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	NDL1	Q06568	189 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YFT2	Q06676	274 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	DIS3	Q08162	1001 aa	Known RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	CRT10	Q08226	957 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	RKM1	Q08961	583 aa	Predicted RBP	3.52	□□□□□ -1.85
YAL004W	YAL004W	VAM3	Q12241	283 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	YER175W-A	Q8TGU4	54 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	BI3	Q9ZZW7	517 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	AI5_BETA	Q9ZZX0	354 aa		3.52	□□□□□ -1.85
YAL004W	YAL004W	PMD1	P32634	1753 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	JIP3	O13555	125 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	ARG4	P04076	463 aa	Predicted RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	RPP2A	P05319	106 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	RPL31B	P0C2H9	113 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	YMR085W	P0CF18	432 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	PMR1	P13586	950 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	ART10	P18634	518 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	PRP4	P20053	465 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	SAR1	P20606	190 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	KGD1	P20967	1014 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	SEC62	P21825	274 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	FEN2	P25621	512 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	IMG1	P25626	169 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	ITR1	P30605	584 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	ARO4	P32449	370 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	ECM25	P32525	599 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	NTR2	P36118	322 aa	Predicted RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	MSR1	P38714	643 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	SMX2	P40204	77 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	ATM1	P40416	690 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	SWP82	P43554	623 aa		3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms