RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MTIF3Q9H2K0 278 aaKnown RBP19.53■□□□□ 0.72
BRCC3-202ENST00000340647 PRDM12Q9H4Q4 367 aa19.53■□□□□ 0.72
BRCC3-202ENST00000340647 KCNH7Q9NS40 1196 aa19.53■□□□□ 0.72
BRCC3-202ENST00000340647 SETD4Q9NVD3 440 aa19.53■□□□□ 0.72
BRCC3-202ENST00000340647 PPP4R2Q9NY27 417 aa19.53■□□□□ 0.72
BRCC3-202ENST00000340647 PRPF3O43395 683 aaKnown RBP19.52■□□□□ 0.72
BRCC3-202ENST00000340647 SCG2P13521 617 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 TCF7P36402 384 aaPredicted RBP19.52■□□□□ 0.72
BRCC3-202ENST00000340647 SREBF1P36956 1147 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 ADCY7P51828 1080 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 ITGB3BPQ13352 177 aaPredicted RBP19.52■□□□□ 0.72
BRCC3-202ENST00000340647 MTMR1Q13613 665 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 RAB30Q15771 203 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 RUFY3Q7L099 469 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 SPRED2Q7Z698 418 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 ATP6V0A1Q93050 837 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.72
BRCC3-202ENST00000340647 NCOA5Q9HCD5 579 aaKnown RBP19.52■□□□□ 0.72
BRCC3-202ENST00000340647 NAP1L2Q9ULW6 460 aaPredicted RBP19.52■□□□□ 0.72
BRCC3-202ENST00000340647 PCDHA11Q9Y5I1 949 aa19.52■□□□□ 0.72
BRCC3-202ENST00000340647 C17orf102A2RUQ5 167 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 hCG_1984214I3L0E3 225 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 MEIS1O00470 390 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 WDR5P61964 334 aaKnown RBP19.51■□□□□ 0.71
BRCC3-202ENST00000340647 DEFB103AP81534 67 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 TEX2Q8IWB9 1127 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 CCDC155Q8N6L0 562 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 ZNF713Q8N859 430 aaPredicted RBP19.51■□□□□ 0.71
BRCC3-202ENST00000340647 LMBR1Q8WVP7 490 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 LARP6Q9BRS8 491 aaKnown RBP19.51■□□□□ 0.71
BRCC3-202ENST00000340647 ZMYND12Q9H0C1 365 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 PRDM6Q9NQX0 595 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 MSRAQ9UJ68 235 aa19.51■□□□□ 0.71
BRCC3-202ENST00000340647 IGLV3-22A0A075B6J6 115 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 ESYT2A0FGR8 921 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 FAM86B1E9PN63 330 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 MAFGO15525 162 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 FAM86B2P0C5J1 330 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
BRCC3-202ENST00000340647 FGD1P98174 961 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 MARCH8Q5T0T0 291 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 JAKMIP3Q5VZ66 844 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 HERC6Q8IVU3 1022 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 GIMAP8Q8ND71 665 aaPredicted RBP19.5■□□□□ 0.71
BRCC3-202ENST00000340647 PHOSPHO2Q8TCD6 241 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 SEPT1Q8WYJ6 367 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 CDHR1Q96JP9 859 aa19.5■□□□□ 0.71
BRCC3-202ENST00000340647 AGO4Q9HCK5 861 aaKnown RBP19.5■□□□□ 0.71
BRCC3-202ENST00000340647 EVPLQ92817 2033 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 EPOPA6NHQ4 379 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 DHX15O43143 795 aaKnown RBP19.49■□□□□ 0.71
BRCC3-202ENST00000340647 LGR5O75473 907 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 BAIAP3O94812 1187 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 FOSP01100 380 aaPredicted RBP19.49■□□□□ 0.71
BRCC3-202ENST00000340647 NEFLP07196 543 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 CA3P07451 260 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 ACTN1P12814 892 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 IFNAR1P17181 557 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 PSMA5P28066 241 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 THPOP40225 353 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 CEP55Q53EZ4 464 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 CNKSR3Q6P9H4 555 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 RUFY4Q6ZNE9 571 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 SLC9A7Q96T83 725 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
BRCC3-202ENST00000340647 TM6SF1Q9BZW5 370 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 MYH9P35579 1960 aaKnown RBP19.49■□□□□ 0.71
BRCC3-202ENST00000340647 XIRP2A4UGR9 3374 aa19.49■□□□□ 0.71
BRCC3-202ENST00000340647 PRRC2BQ5JSZ5 2229 aaKnown RBP19.48■□□□□ 0.71
BRCC3-202ENST00000340647 CCDC196A0A1B0GTZ2 297 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 LCHNA4D1U4 455 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 ATG7O95352 703 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 PARNO95453 639 aaKnown RBP19.48■□□□□ 0.71
BRCC3-202ENST00000340647 CCNE2O96020 404 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 ARHGAP4P98171 946 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 AP3B2Q13367 1082 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 PLEKHG4Q58EX7 1191 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 RASGRP4Q8TDF6 673 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 ZBTB10Q96DT7 871 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 SLC28A3Q9HAS3 691 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 COL4A4P53420 1690 aaPredicted RBP19.48■□□□□ 0.71
BRCC3-202ENST00000340647 NFASCO94856 1347 aa19.48■□□□□ 0.71
BRCC3-202ENST00000340647 RSPH10B2B2RC85 870 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 RFXAPO00287 272 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 CYP3A4P08684 503 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 RSPH10BP0C881 870 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 MARK3P27448 753 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 TAP1Q03518 808 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.47■□□□□ 0.71
BRCC3-202ENST00000340647 DBF4BQ8NFT6 615 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 RNF26Q9BY78 433 aaPredicted RBP19.47■□□□□ 0.71
BRCC3-202ENST00000340647 JPH1Q9HDC5 661 aaPredicted RBP19.47■□□□□ 0.71
BRCC3-202ENST00000340647 SLC9A2Q9UBY0 812 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 EMSYQ7Z589 1322 aa19.47■□□□□ 0.71
BRCC3-202ENST00000340647 IGKV6D-21A0A0A0MT36 114 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 MBLAC1A4D2B0 266 aaPredicted RBP19.46■□□□□ 0.71
BRCC3-202ENST00000340647 CHRNA1P02708 482 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 ACTR2P61160 394 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 FAM26DQ5JW98 314 aa19.46■□□□□ 0.71
BRCC3-202ENST00000340647 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms