RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	PHO84	P25297	587 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	SMY1	P32364	656 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	SPC110	P32380	944 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	APE2	P32454	952 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	ERG1	P32476	496 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	RPS0A	P32905	252 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	FRE2	P36033	711 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	MRPL4	P36517	319 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	ADH5	P38113	351 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	RRP4	P38792	359 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	YTA12	P40341	825 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	NAS2	P40555	220 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	AZF1	P41696	914 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	CRZ1	P53968	678 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	RLI1	Q03195	608 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	SCW10	Q04951	389 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	DBP9	Q06218	594 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	NDL1	Q06568	189 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	DAP1	Q12091	152 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	YDL009C	Q12210	107 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	FAA1	P30624	700 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	NIP1	P32497	812 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	ECM25	P32525	599 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	SIP2	P34164	415 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	OLA1	P38219	394 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	GDT1	P38301	280 aa	Predicted RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	RRP3	P38712	501 aa	Known RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	STN1	P38960	494 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	GAT2	P40209	560 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	YIP5	P53108	310 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	PNG1	Q02890	363 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	VPS74	Q06385	345 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	PML1	Q07930	204 aa	Predicted RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	PSY3	Q12318	242 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	CSR2	Q12734	1121 aa		1.62	□□□□□ -2.15
RLM1	YPL089C	TFB5	Q3E7C1	72 aa	Predicted RBP	1.62	□□□□□ -2.15
RLM1	YPL089C	HIS4	P00815	799 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	CTR86	P25355	563 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YCR100C	P25606	316 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YCR022C	P25620	114 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	HSP104	P31539	908 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	RRP1	P35178	278 aa	Predicted RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	RSM22	P36056	628 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	GPI16	P38875	610 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YPS6	P40583	537 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	CHS6	P40955	746 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	MDE1	P47095	244 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YIP1	P53039	248 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	ROG1	P53118	685 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	GIP3	Q03016	1276 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	TAF12	Q03761	539 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	SNT309	Q06091	175 aa	Predicted RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	YFH1	Q07540	174 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	REX3	Q12090	404 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	TIP41	Q12199	356 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	ILV5	P06168	395 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	CHS1	P08004	1131 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	NFT1	P0CE68	1218 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YAR066W	P0CX18	203 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YHR214W	P0CX19	203 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	UBA1	P22515	1024 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	PHO91	P27514	894 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	CYS4	P32582	507 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	YEL043W	P32618	956 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YCR041W	P37265	110 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	LYS1	P38998	373 aa	RIP-Chip data	1.61	□□□□□ -2.15	not detected
RLM1	YPL089C	PCF11	P39081	626 aa	Predicted RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	YAL037W	P39728	267 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	DIM1	P41819	318 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	ELP2	P42935	788 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	GWT1	P47026	490 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	IKS1	P47042	667 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	HMS2	P47175	358 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	ASN2	P49090	572 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	CUE3	P53137	624 aa	Known RBP	1.61	□□□□□ -2.15
RLM1	YPL089C	FRE4	P53746	719 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	ODC1	Q03028	310 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	URH1	Q04179	340 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	NSE1	Q07913	336 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	REX4	Q08237	289 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YLL056C	Q12177	298 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	RUP1	Q12242	671 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	ORT1	Q12375	292 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	YBR298C-A	Q8TGK4	73 aa		1.61	□□□□□ -2.15
RLM1	YPL089C	MRS3	P10566	314 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	RAD57	P25301	460 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	CRM1	P30822	1084 aa	Known RBP	1.6	□□□□□ -2.15
RLM1	YPL089C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	1.6	□□□□□ -2.15	not detected
RLM1	YPL089C	YSC83	P32792	385 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	QDR3	P38227	689 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	MNL1	P38888	796 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	DHH1	P39517	506 aa	Known RBP	1.6	□□□□□ -2.15
RLM1	YPL089C	PES4	P39684	611 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	HAT2	P39984	401 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	YER079W	P40052	210 aa	Known RBP	1.6	□□□□□ -2.15
RLM1	YPL089C	YIL089W	P40500	205 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	EFM3	P47163	339 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	BRO1	P48582	844 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	YNL143C	P53908	130 aa		1.6	□□□□□ -2.15
RLM1	YPL089C	AQR1	P53943	586 aa		1.6	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms