RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C YMR262WP38430 313 aa3.96□□□□□ -1.78
VHS3YOR054C PCM1P38628 557 aaKnown RBP3.96□□□□□ -1.78
VHS3YOR054C APM2P38700 605 aa3.96□□□□□ -1.78
VHS3YOR054C LAG1P38703 411 aa3.96□□□□□ -1.78
VHS3YOR054C QNS1P38795 714 aaKnown RBP3.96□□□□□ -1.78
VHS3YOR054C FAD1P38913 306 aa3.96□□□□□ -1.78
VHS3YOR054C MNN1P39106 762 aa3.96□□□□□ -1.78
VHS3YOR054C SAW1P39735 261 aa3.96□□□□□ -1.78
VHS3YOR054C PCL6P40038 420 aa3.96□□□□□ -1.78
VHS3YOR054C VRG4P40107 337 aa3.96□□□□□ -1.78
VHS3YOR054C LCB2P40970 561 aa3.96□□□□□ -1.78
VHS3YOR054C HLJ1P48353 224 aa3.96□□□□□ -1.78
VHS3YOR054C DOC1P53068 250 aa3.96□□□□□ -1.78
VHS3YOR054C NRD1P53617 575 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
VHS3YOR054C FOL1P53848 824 aa3.96□□□□□ -1.78
VHS3YOR054C GPD1Q00055 391 aaKnown RBP3.96□□□□□ -1.78
VHS3YOR054C RPA49Q01080 415 aaPredicted RBP3.96□□□□□ -1.78
VHS3YOR054C PEX12Q04370 399 aa3.96□□□□□ -1.78
VHS3YOR054C AIM33Q04516 312 aa3.96□□□□□ -1.78
VHS3YOR054C PHO92Q06390 306 aa3.96□□□□□ -1.78
VHS3YOR054C RAD34Q06665 692 aa3.96□□□□□ -1.78
VHS3YOR054C CMR1Q12510 522 aaKnown RBP3.96□□□□□ -1.78
VHS3YOR054C YPL119C-AQ3E751 87 aa3.96□□□□□ -1.78
VHS3YOR054C YOL159C-AQ3E769 90 aa3.96□□□□□ -1.78
VHS3YOR054C HIS5P07172 385 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-LR4P0C2I8 440 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C COS2P0CX12 379 aa3.95□□□□□ -1.78
VHS3YOR054C COS3P0CX13 379 aa3.95□□□□□ -1.78
VHS3YOR054C RPS18AP0CX55 146 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C RPS18BP0CX56 146 aaPredicted RBP3.95□□□□□ -1.78
VHS3YOR054C TY1A-DR6P0CX70 440 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-ER1P0CX71 440 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-LR2P0CX72 440 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-PLP0CX73 440 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-JR1P0CX74 440 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-LR3P0CX75 440 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-ML2P0CX76 440 aa3.95□□□□□ -1.78
VHS3YOR054C DAL81P21657 970 aa3.95□□□□□ -1.78
VHS3YOR054C RPS1BP23248 255 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C HCM1P25364 564 aa3.95□□□□□ -1.78
VHS3YOR054C NAM9P27929 486 aa3.95□□□□□ -1.78
VHS3YOR054C RPL8BP29453 256 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C KRE6P32486 720 aa3.95□□□□□ -1.78
VHS3YOR054C ECM25P32525 599 aa3.95□□□□□ -1.78
VHS3YOR054C UTR2P32623 467 aa3.95□□□□□ -1.78
VHS3YOR054C PDR3P33200 976 aa3.95□□□□□ -1.78
VHS3YOR054C RPS1AP33442 255 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C SPT23P35210 1082 aa3.95□□□□□ -1.78
VHS3YOR054C SRP102P36057 244 aaPredicted RBP3.95□□□□□ -1.78
VHS3YOR054C NOP4P37838 685 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C ATG12P38316 186 aa3.95□□□□□ -1.78
VHS3YOR054C GEP4P38812 185 aa3.95□□□□□ -1.78
VHS3YOR054C NSG1P38837 291 aa3.95□□□□□ -1.78
VHS3YOR054C GAA1P39012 614 aa3.95□□□□□ -1.78
VHS3YOR054C ACO2P39533 789 aa3.95□□□□□ -1.78
VHS3YOR054C ARG2P40360 574 aa3.95□□□□□ -1.78
VHS3YOR054C PSA1P41940 361 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C YJR030CP47101 745 aa3.95□□□□□ -1.78
VHS3YOR054C IMO32P53219 342 aa3.95□□□□□ -1.78
VHS3YOR054C OCA2P53949 197 aa3.95□□□□□ -1.78
VHS3YOR054C ARK1P53974 638 aa3.95□□□□□ -1.78
VHS3YOR054C ERV25P54837 211 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C REG1Q00816 1014 aa3.95□□□□□ -1.78
VHS3YOR054C MRPS16Q02608 121 aa3.95□□□□□ -1.78
VHS3YOR054C ROD1Q02805 837 aa3.95□□□□□ -1.78
VHS3YOR054C TRS130Q03660 1102 aa3.95□□□□□ -1.78
VHS3YOR054C SWF1Q04629 336 aa3.95□□□□□ -1.78
VHS3YOR054C PAL1Q05518 499 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C GPI11Q06636 219 aa3.95□□□□□ -1.78
VHS3YOR054C SCP1Q08873 200 aa3.95□□□□□ -1.78
VHS3YOR054C YPL199CQ08954 240 aa3.95□□□□□ -1.78
VHS3YOR054C TY1A-GR1Q12085 440 aa3.95□□□□□ -1.78
VHS3YOR054C YOR022CQ12204 715 aa3.95□□□□□ -1.78
VHS3YOR054C PST2Q12335 198 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C PFK27Q12471 397 aaPredicted RBP3.95□□□□□ -1.78
VHS3YOR054C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C TY1A-OLQ92392 440 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C UBR2Q07963 1872 aa3.95□□□□□ -1.78
VHS3YOR054C TOM1Q03280 3268 aa3.95□□□□□ -1.78
VHS3YOR054C FLP1P03870 423 aa3.95□□□□□ -1.78
VHS3YOR054C ATP1P07251 545 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C MET2P08465 486 aa3.95□□□□□ -1.78
VHS3YOR054C IMA3P0CW40 589 aa3.95□□□□□ -1.78
VHS3YOR054C IMA4P0CW41 589 aa3.95□□□□□ -1.78
VHS3YOR054C PCK1P10963 549 aa3.95□□□□□ -1.78
VHS3YOR054C RPB10P22139 70 aa3.95□□□□□ -1.78
VHS3YOR054C SAT4P25333 603 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C DAL2P25335 343 aa3.95□□□□□ -1.78
VHS3YOR054C GSH1P32477 678 aa3.95□□□□□ -1.78
VHS3YOR054C BCS1P32839 456 aa3.95□□□□□ -1.78
VHS3YOR054C ELF1P36053 145 aa3.95□□□□□ -1.78
VHS3YOR054C CAF4P36130 643 aa3.95□□□□□ -1.78
VHS3YOR054C SCO2P38072 301 aa3.95□□□□□ -1.78
VHS3YOR054C YBL029WP38201 376 aa3.95□□□□□ -1.78
VHS3YOR054C GND1P38720 489 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C ERP2P39704 215 aa3.95□□□□□ -1.78
VHS3YOR054C FLC2P39719 783 aa3.95□□□□□ -1.78
VHS3YOR054C UTP7P40055 554 aaKnown RBP3.95□□□□□ -1.78
VHS3YOR054C KHA1P40309 873 aa3.95□□□□□ -1.78
VHS3YOR054C YIL166CP40445 542 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms