RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W KKQ8P36004 724 aa3.59□□□□□ -1.83
SSU72YNL222W NDE1P40215 560 aa3.59□□□□□ -1.83
SSU72YNL222W MPP10P47083 593 aaKnown RBP3.59□□□□□ -1.83
SSU72YNL222W SHY1P53266 389 aa3.59□□□□□ -1.83
SSU72YNL222W MRPL19P53875 158 aa3.59□□□□□ -1.83
SSU72YNL222W GRX3Q03835 250 aa3.59□□□□□ -1.83
SSU72YNL222W YOL159C-AQ3E769 90 aa3.59□□□□□ -1.83
SSU72YNL222W MUD1P32605 298 aaKnown RBP3.58□□□□□ -1.84
SSU72YNL222W SAS3P34218 831 aa3.58□□□□□ -1.84
SSU72YNL222W ARA1P38115 344 aa3.58□□□□□ -1.84
SSU72YNL222W HMS2P47175 358 aa3.58□□□□□ -1.84
SSU72YNL222W PEX25Q02969 394 aa3.58□□□□□ -1.84
SSU72YNL222W VTA1Q06263 330 aa3.58□□□□□ -1.84
SSU72YNL222W FDH1Q08911 376 aa3.58□□□□□ -1.84
SSU72YNL222W WTM1Q12363 437 aaKnown RBP3.58□□□□□ -1.84
SSU72YNL222W ORT1Q12375 292 aa3.58□□□□□ -1.84
SSU72YNL222W RTN2Q12443 393 aa3.58□□□□□ -1.84
SSU72YNL222W ILV5P06168 395 aaKnown RBP3.57□□□□□ -1.84
SSU72YNL222W CYC3P06182 269 aa3.57□□□□□ -1.84
SSU72YNL222W LSB5P25369 354 aa3.57□□□□□ -1.84
SSU72YNL222W DLD2P46681 530 aaKnown RBP3.57□□□□□ -1.84
SSU72YNL222W TCB2P48231 1178 aa3.57□□□□□ -1.84
SSU72YNL222W YMR027WQ04371 470 aa3.57□□□□□ -1.84
SSU72YNL222W SGT1Q08446 395 aa3.57□□□□□ -1.84
SSU72YNL222W RTP1Q12751 981 aa3.57□□□□□ -1.84
SSU72YNL222W SIN4P32259 974 aa3.56□□□□□ -1.84
SSU72YNL222W PRS1P32895 427 aaKnown RBP3.56□□□□□ -1.84
SSU72YNL222W HCS1P34243 683 aa3.56□□□□□ -1.84
SSU72YNL222W YHR131CP38835 850 aa3.56□□□□□ -1.84
SSU72YNL222W NAB3P38996 802 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
SSU72YNL222W SSU1P41930 458 aa3.56□□□□□ -1.84
SSU72YNL222W YJR011CP47086 261 aaPredicted RBP3.56□□□□□ -1.84
SSU72YNL222W BET5Q03630 159 aa3.56□□□□□ -1.84
SSU72YNL222W MDM30Q05930 598 aa3.56□□□□□ -1.84
SSU72YNL222W RMD5Q12508 421 aa3.56□□□□□ -1.84
SSU72YNL222W NAT1P12945 854 aaKnown RBP3.55□□□□□ -1.84
SSU72YNL222W RED1P14291 827 aa3.55□□□□□ -1.84
SSU72YNL222W PCL1P24867 279 aa3.55□□□□□ -1.84
SSU72YNL222W POP5P28005 173 aa3.55□□□□□ -1.84
SSU72YNL222W BEM1P29366 551 aa3.55□□□□□ -1.84
SSU72YNL222W MRPL10P36520 322 aa3.55□□□□□ -1.84
SSU72YNL222W RFC3P38629 340 aa3.55□□□□□ -1.84
SSU72YNL222W PHB2P50085 310 aa3.55□□□□□ -1.84
SSU72YNL222W FMS1P50264 508 aa3.55□□□□□ -1.84
SSU72YNL222W RSN1Q03516 953 aa3.55□□□□□ -1.84
SSU72YNL222W REX4Q08237 289 aa3.55□□□□□ -1.84
SSU72YNL222W SNT1P25357 1226 aa3.54□□□□□ -1.84
SSU72YNL222W RHB1P25378 209 aa3.54□□□□□ -1.84
SSU72YNL222W RML2P32611 393 aa3.54□□□□□ -1.84
SSU72YNL222W UTH1P36135 365 aa3.54□□□□□ -1.84
SSU72YNL222W AZR1P50080 613 aa3.54□□□□□ -1.84
SSU72YNL222W TAF11Q04226 346 aa3.54□□□□□ -1.84
SSU72YNL222W CTR86P25355 563 aa3.53□□□□□ -1.84
SSU72YNL222W ERG3P32353 365 aa3.53□□□□□ -1.84
SSU72YNL222W KAR9P32526 644 aa3.53□□□□□ -1.84
SSU72YNL222W BRO1P48582 844 aa3.53□□□□□ -1.84
SSU72YNL222W HAL1Q01766 294 aa3.53□□□□□ -1.84
SSU72YNL222W VAM3Q12241 283 aa3.53□□□□□ -1.84
SSU72YNL222W YRM1Q12340 786 aa3.53□□□□□ -1.84
SSU72YNL222W CLB3P24870 427 aa3.52□□□□□ -1.85
SSU72YNL222W RAD57P25301 460 aa3.52□□□□□ -1.85
SSU72YNL222W KRE2P27809 442 aa3.52□□□□□ -1.85
SSU72YNL222W SOR1P35497 357 aaKnown RBP3.52□□□□□ -1.85
SSU72YNL222W TSA2Q04120 196 aa3.52□□□□□ -1.85
SSU72YNL222W RRP45Q05636 305 aaKnown RBP3.52□□□□□ -1.85
SSU72YNL222W TSR2Q06672 205 aaKnown RBP3.52□□□□□ -1.85
SSU72YNL222W SOR2Q07786 357 aa3.52□□□□□ -1.85
SSU72YNL222W IRC25Q07951 179 aa3.52□□□□□ -1.85
SSU72YNL222W PGA3Q12746 312 aaKnown RBP3.52□□□□□ -1.85
SSU72YNL222W INO80P53115 1489 aa3.52□□□□□ -1.85
SSU72YNL222W APE3P37302 537 aaKnown RBP3.51□□□□□ -1.85
SSU72YNL222W SEC9P40357 651 aa3.51□□□□□ -1.85
SSU72YNL222W ARX1Q03862 593 aaKnown RBP3.51□□□□□ -1.85
SSU72YNL222W SKI7Q08491 747 aaPredicted RBP3.51□□□□□ -1.85
SSU72YNL222W SPO12P17123 173 aa3.5□□□□□ -1.85
SSU72YNL222W SPO7P18410 259 aa3.5□□□□□ -1.85
SSU72YNL222W RHO5P53879 331 aaKnown RBP3.5□□□□□ -1.85
SSU72YNL222W GPI15P53961 229 aa3.5□□□□□ -1.85
SSU72YNL222W GIP3Q03016 1276 aa3.5□□□□□ -1.85
SSU72YNL222W SRV2P17555 526 aaKnown RBP3.49□□□□□ -1.85
SSU72YNL222W GEX1P25596 615 aa3.49□□□□□ -1.85
SSU72YNL222W SMY1P32364 656 aaKnown RBP3.49□□□□□ -1.85
SSU72YNL222W HIR2P32480 875 aa3.49□□□□□ -1.85
SSU72YNL222W CSE2P33308 149 aa3.49□□□□□ -1.85
SSU72YNL222W NTC20P38302 140 aaPredicted RBP3.49□□□□□ -1.85
SSU72YNL222W JLP2P40206 208 aa3.49□□□□□ -1.85
SSU72YNL222W GPD2P41911 440 aaKnown RBP3.49□□□□□ -1.85
SSU72YNL222W COS5P47187 383 aa3.49□□□□□ -1.85
SSU72YNL222W YGL138CP53122 345 aa3.49□□□□□ -1.85
SSU72YNL222W OAZ1Q02803 292 aa3.49□□□□□ -1.85
SSU72YNL222W BCH1Q05029 724 aa3.49□□□□□ -1.85
SSU72YNL222W COS7Q07788 383 aa3.49□□□□□ -1.85
SSU72YNL222W RKM1Q08961 583 aaPredicted RBP3.49□□□□□ -1.85
SSU72YNL222W HSP42Q12329 375 aa3.49□□□□□ -1.85
SSU72YNL222W AHC1Q12433 566 aa3.49□□□□□ -1.85
SSU72YNL222W YRF1-4O13559 1382 aa3.49□□□□□ -1.85
SSU72YNL222W CLC1P17891 233 aa3.48□□□□□ -1.85
SSU72YNL222W CLN1P20437 546 aa3.48□□□□□ -1.85
SSU72YNL222W YME2P32843 850 aa3.48□□□□□ -1.85
SSU72YNL222W PCF11P39081 626 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 110 ms