RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W YGR127WP53275 312 aa5.14□□□□□ -1.59
SPC97YHR172W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SPC97YHR172W FMP30Q02883 468 aa5.14□□□□□ -1.59
SPC97YHR172W SPO77Q06134 477 aa5.14□□□□□ -1.59
SPC97YHR172W ARR3Q06598 404 aa5.14□□□□□ -1.59
SPC97YHR172W MET32Q12041 191 aa5.14□□□□□ -1.59
SPC97YHR172W PRP46Q12417 451 aaPredicted RBP5.14□□□□□ -1.59
SPC97YHR172W TUS1Q06412 1307 aa5.14□□□□□ -1.59
SPC97YHR172W RPS16AP0CX51 143 aaKnown RBP5.14□□□□□ -1.59
SPC97YHR172W RPS16BP0CX52 143 aaKnown RBP5.14□□□□□ -1.59
SPC97YHR172W IMG1P25626 169 aa5.14□□□□□ -1.59
SPC97YHR172W MEI4P29467 408 aa5.14□□□□□ -1.59
SPC97YHR172W SPO23P33757 523 aa5.14□□□□□ -1.59
SPC97YHR172W NUF2P33895 451 aa5.14□□□□□ -1.59
SPC97YHR172W RTC2P38279 296 aa5.14□□□□□ -1.59
SPC97YHR172W SPP381P38282 291 aaPredicted RBP5.14□□□□□ -1.59
SPC97YHR172W PCA1P38360 1216 aa5.14□□□□□ -1.59
SPC97YHR172W SOP4P39543 234 aaPredicted RBP5.14□□□□□ -1.59
SPC97YHR172W ECM1P39715 212 aa5.14□□□□□ -1.59
SPC97YHR172W SSY1Q03770 852 aa5.14□□□□□ -1.59
SPC97YHR172W CDC123Q05791 360 aa5.14□□□□□ -1.59
SPC97YHR172W SYO1Q07395 620 aa5.14□□□□□ -1.59
SPC97YHR172W PEX27Q08580 376 aa5.14□□□□□ -1.59
SPC97YHR172W AI5_BETAQ9ZZX0 354 aa5.14□□□□□ -1.59
SPC97YHR172W SDH2P21801 266 aa5.13□□□□□ -1.59
SPC97YHR172W GPI12P23797 304 aa5.13□□□□□ -1.59
SPC97YHR172W RRT12P25381 491 aa5.13□□□□□ -1.59
SPC97YHR172W GCG1P32656 232 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W COS9P36034 407 aa5.13□□□□□ -1.59
SPC97YHR172W SNU114P36048 1008 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W CHK1P38147 527 aa5.13□□□□□ -1.59
SPC97YHR172W DUG2P38149 878 aa5.13□□□□□ -1.59
SPC97YHR172W SIC1P38634 284 aa5.13□□□□□ -1.59
SPC97YHR172W IMD2P38697 523 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W AMA1P50082 593 aa5.13□□□□□ -1.59
SPC97YHR172W IZH1Q03419 316 aa5.13□□□□□ -1.59
SPC97YHR172W PEX12Q04370 399 aa5.13□□□□□ -1.59
SPC97YHR172W POS5Q06892 414 aa5.13□□□□□ -1.59
SPC97YHR172W YDL144CQ07589 356 aa5.13□□□□□ -1.59
SPC97YHR172W YDL176WQ12027 708 aa5.13□□□□□ -1.59
SPC97YHR172W SLF1Q12034 447 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W DAP1Q12091 152 aa5.13□□□□□ -1.59
SPC97YHR172W SKI3P17883 1432 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W CSM1P25651 190 aa5.13□□□□□ -1.59
SPC97YHR172W SPS19P32573 292 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W REC114P32841 428 aa5.13□□□□□ -1.59
SPC97YHR172W PRS4P38063 326 aaPredicted RBP5.13□□□□□ -1.59
SPC97YHR172W YBR259WP38338 688 aa5.13□□□□□ -1.59
SPC97YHR172W GPI16P38875 610 aa5.13□□□□□ -1.59
SPC97YHR172W UIP3P39547 235 aa5.13□□□□□ -1.59
SPC97YHR172W GIM4P40005 111 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W THO1P40040 218 aaKnown RBP5.13□□□□□ -1.59
SPC97YHR172W TED1P40533 473 aa5.13□□□□□ -1.59
SPC97YHR172W GAB1P41733 394 aa5.13□□□□□ -1.59
SPC97YHR172W TAF6P53040 516 aa5.13□□□□□ -1.59
SPC97YHR172W YGR079WP53249 370 aa5.13□□□□□ -1.59
SPC97YHR172W ASI2P53895 289 aa5.13□□□□□ -1.59
SPC97YHR172W SKI8Q02793 397 aaPredicted RBP5.13□□□□□ -1.59
SPC97YHR172W DCR2Q05924 578 aa5.13□□□□□ -1.59
SPC97YHR172W BAG7Q12128 409 aa5.13□□□□□ -1.59
SPC97YHR172W RMD5Q12508 421 aa5.13□□□□□ -1.59
SPC97YHR172W THP2O13539 261 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W RPL18AP0CX49 186 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W RPL18BP0CX50 186 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W KRE2P27809 442 aa5.12□□□□□ -1.59
SPC97YHR172W VMA6P32366 345 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W CBT1P36038 271 aaPredicted RBP5.12□□□□□ -1.59
SPC97YHR172W NTR2P36118 322 aaPredicted RBP5.12□□□□□ -1.59
SPC97YHR172W BIG1P38813 335 aa5.12□□□□□ -1.59
SPC97YHR172W MRX5P47007 382 aa5.12□□□□□ -1.59
SPC97YHR172W EBS1Q03466 884 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W AFT2Q08957 416 aa5.12□□□□□ -1.59
SPC97YHR172W GRE1Q08969 168 aa5.12□□□□□ -1.59
SPC97YHR172W GPM2Q12008 311 aa5.12□□□□□ -1.59
SPC97YHR172W YBL029C-AQ3E756 94 aa5.12□□□□□ -1.59
SPC97YHR172W GDH1P07262 454 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W FRS2P15625 503 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W YAP1P19880 650 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W DEG1P31115 442 aaKnown RBP5.12□□□□□ -1.59
SPC97YHR172W MSS51P32335 436 aa5.12□□□□□ -1.59
SPC97YHR172W AME1P38313 324 aa5.12□□□□□ -1.59
SPC97YHR172W SPC97P38863 823 aa5.12□□□□□ -1.59
SPC97YHR172W FET3P38993 636 aa5.12□□□□□ -1.59
SPC97YHR172W CTF19Q02732 369 aa5.12□□□□□ -1.59
SPC97YHR172W YDL114WQ07530 308 aa5.12□□□□□ -1.59
SPC97YHR172W ZPS1Q12512 249 aa5.12□□□□□ -1.59
SPC97YHR172W COX3P00420 269 aa5.11□□□□□ -1.59
SPC97YHR172W PAB1P04147 577 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SPC97YHR172W CHS1P08004 1131 aa5.11□□□□□ -1.59
SPC97YHR172W NAR1P23503 491 aaKnown RBP5.11□□□□□ -1.59
SPC97YHR172W SKT5P34226 696 aa5.11□□□□□ -1.59
SPC97YHR172W AAP1P37898 856 aaKnown RBP5.11□□□□□ -1.59
SPC97YHR172W FIG1P38224 298 aa5.11□□□□□ -1.59
SPC97YHR172W APD1P38281 316 aa5.11□□□□□ -1.59
SPC97YHR172W ICE2P40499 491 aa5.11□□□□□ -1.59
SPC97YHR172W TAX4P47030 604 aa5.11□□□□□ -1.59
SPC97YHR172W VMA10P48836 114 aaKnown RBP5.11□□□□□ -1.59
SPC97YHR172W LSC2P53312 427 aa5.11□□□□□ -1.59
SPC97YHR172W SPC98P53540 846 aa5.11□□□□□ -1.59
SPC97YHR172W VPS60Q03390 229 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms