RNA–Protein interactions for RNA: YGR161C-C

YGR161C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR161C-C, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-CYGR161C-C PML1Q07930 204 aaPredicted RBP4.28□□□□□ -1.72
YGR161C-CYGR161C-C SFG1Q12507 346 aa4.28□□□□□ -1.72
YGR161C-CYGR161C-C RMD5Q12508 421 aa4.28□□□□□ -1.72
YGR161C-CYGR161C-C MRS3P10566 314 aa4.27□□□□□ -1.73
YGR161C-CYGR161C-C HSP104P31539 908 aaKnown RBP4.27□□□□□ -1.73
YGR161C-CYGR161C-C FRE2P36033 711 aa4.27□□□□□ -1.73
YGR161C-CYGR161C-C PES4P39684 611 aa4.27□□□□□ -1.73
YGR161C-CYGR161C-C TES1P41903 349 aaKnown RBP4.27□□□□□ -1.73
YGR161C-CYGR161C-C MDE1P47095 244 aa4.27□□□□□ -1.73
YGR161C-CYGR161C-C GPI15P53961 229 aa4.27□□□□□ -1.73
YGR161C-CYGR161C-C YDR541CQ03049 344 aa4.27□□□□□ -1.73
YGR161C-CYGR161C-C TFB5Q3E7C1 72 aaPredicted RBP4.27□□□□□ -1.73
YGR161C-CYGR161C-C PDE2P06776 526 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C TRX1P22217 103 aaKnown RBP4.26□□□□□ -1.73
YGR161C-CYGR161C-C YCR100CP25606 316 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C SEC1P30619 724 aaKnown RBP4.26□□□□□ -1.73
YGR161C-CYGR161C-C POP2P39008 433 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C DIM1P41819 318 aaKnown RBP4.26□□□□□ -1.73
YGR161C-CYGR161C-C PDR16P53860 351 aaKnown RBP4.26□□□□□ -1.73
YGR161C-CYGR161C-C UTP6Q02354 440 aaKnown RBP4.26□□□□□ -1.73
YGR161C-CYGR161C-C ODC1Q03028 310 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C YLR281CQ05863 155 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C SKI7Q08491 747 aaPredicted RBP4.26□□□□□ -1.73
YGR161C-CYGR161C-C REX3Q12090 404 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C ATG34Q12292 412 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C YDR061WQ12298 539 aa4.26□□□□□ -1.73
YGR161C-CYGR161C-C CYB2P00175 591 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C CHS1P08004 1131 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C IMA3P0CW40 589 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C IMA4P0CW41 589 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C UBA1P22515 1024 aaKnown RBP4.25□□□□□ -1.73
YGR161C-CYGR161C-C ITR1P30605 584 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C YNK1P36010 153 aaKnown RBP4.25□□□□□ -1.73
YGR161C-CYGR161C-C QDR3P38227 689 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C RRP3P38712 501 aaKnown RBP4.25□□□□□ -1.73
YGR161C-CYGR161C-C LYS1P38998 373 aaRIP-Chip data4.25□□□□□ -1.73not detected
YGR161C-CYGR161C-C RRT5P43607 289 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C EFM3P47163 339 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C ASN2P49090 572 aaKnown RBP4.25□□□□□ -1.73
YGR161C-CYGR161C-C SHE4P51534 789 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C YIP5P53108 310 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C ROG1P53118 685 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C PRO2P54885 456 aaKnown RBP4.25□□□□□ -1.73
YGR161C-CYGR161C-C IPK1Q06667 281 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C IMA2Q08295 589 aa4.25□□□□□ -1.73
YGR161C-CYGR161C-C RAD57P25301 460 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C PHO91P27514 894 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C NRP1P32770 719 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
YGR161C-CYGR161C-C INM1P38710 295 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C RTT107P38850 1070 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C MET30P39014 640 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C DHH1P39517 506 aaKnown RBP4.24□□□□□ -1.73
YGR161C-CYGR161C-C ELP2P42935 788 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C IKS1P47042 667 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C HMS2P47175 358 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C PIB2P53191 635 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C YNL143CP53908 130 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C YDR415CQ04033 374 aaPredicted RBP4.24□□□□□ -1.73
YGR161C-CYGR161C-C FMP42Q04991 504 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C NOP6Q07623 225 aaKnown RBP4.24□□□□□ -1.73
YGR161C-CYGR161C-C SRL1Q08673 210 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C YLL056CQ12177 298 aa4.24□□□□□ -1.73
YGR161C-CYGR161C-C NFT1P0CE68 1218 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C YAR066WP0CX18 203 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C YHR214WP0CX19 203 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C SPO12P17123 173 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C LSB5P25369 354 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C NDI1P32340 513 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C CYS4P32582 507 aaKnown RBP4.23□□□□□ -1.73
YGR161C-CYGR161C-C GLC7P32598 312 aaKnown RBP4.23□□□□□ -1.73
YGR161C-CYGR161C-C YSC83P32792 385 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C RSM22P36056 628 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C RIM2P38127 377 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C AVT4P50944 713 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C YNR048WP53740 393 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C YNR068CP53754 272 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C SNA4Q07549 140 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C SGT1Q08446 395 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C SRL2Q12020 392 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C YPR022CQ12139 1133 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C RNH203Q12338 110 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C SRN2Q99176 213 aa4.23□□□□□ -1.73
YGR161C-CYGR161C-C SCH9P11792 824 aaKnown RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C RNA14P25298 677 aaKnown RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C RDS1P25611 832 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C TIP1P27654 210 aaPredicted RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C CRM1P30822 1084 aaKnown RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C TRS65P32893 560 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C LOS1P33418 1100 aaPredicted RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C RRF1P38771 230 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C PCF11P39081 626 aaPredicted RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C SHO1P40073 367 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C YIL169CP40442 995 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C CUE3P53137 624 aaKnown RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C FRE4P53746 719 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C RSN1Q03516 953 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C NUP53Q03790 475 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C ERP1Q05359 219 aaKnown RBP4.22□□□□□ -1.73
YGR161C-CYGR161C-C REX4Q08237 289 aa4.22□□□□□ -1.73
YGR161C-CYGR161C-C NBL1Q3E7Y6 73 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms