RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W PHO86P46956 311 aa2.04□□□□□ -2.08
SMD1YGR074W MLC1P53141 149 aa2.04□□□□□ -2.08
SMD1YGR074W POP6P53218 158 aa2.04□□□□□ -2.08
SMD1YGR074W BTN2P53286 410 aa2.04□□□□□ -2.08
SMD1YGR074W FRE4P53746 719 aa2.04□□□□□ -2.08
SMD1YGR074W CAF40P53829 373 aa2.04□□□□□ -2.08
SMD1YGR074W RHO5P53879 331 aaKnown RBP2.04□□□□□ -2.08
SMD1YGR074W ODC1Q03028 310 aa2.04□□□□□ -2.08
SMD1YGR074W TAF12Q03761 539 aa2.04□□□□□ -2.08
SMD1YGR074W PRP42Q03776 544 aaKnown RBP2.04□□□□□ -2.08
SMD1YGR074W YMR087WQ04299 284 aa2.04□□□□□ -2.08
SMD1YGR074W TIP41Q12199 356 aa2.04□□□□□ -2.08
SMD1YGR074W SET6Q12529 373 aa2.04□□□□□ -2.08
SMD1YGR074W STF1P01098 86 aa2.03□□□□□ -2.08
SMD1YGR074W ADE4P04046 510 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W DST1P07273 309 aa2.03□□□□□ -2.08
SMD1YGR074W RPL20AP0CX23 172 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W RPL20BP0CX24 172 aaPredicted RBP2.03□□□□□ -2.08
SMD1YGR074W NAT1P12945 854 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W SEC63P14906 663 aa2.03□□□□□ -2.08
SMD1YGR074W PHO84P25297 587 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W RAD57P25301 460 aa2.03□□□□□ -2.08
SMD1YGR074W SPC110P32380 944 aa2.03□□□□□ -2.08
SMD1YGR074W DPH2P32461 534 aa2.03□□□□□ -2.08
SMD1YGR074W SMI1P32566 505 aa2.03□□□□□ -2.08
SMD1YGR074W GLC7P32598 312 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W HEL1P36113 551 aa2.03□□□□□ -2.08
SMD1YGR074W PFF1P38244 976 aa2.03□□□□□ -2.08
SMD1YGR074W MTC4P38335 694 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W RFC3P38629 340 aa2.03□□□□□ -2.08
SMD1YGR074W RRP4P38792 359 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W RTT107P38850 1070 aa2.03□□□□□ -2.08
SMD1YGR074W MDM31P38880 579 aa2.03□□□□□ -2.08
SMD1YGR074W YER079WP40052 210 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W GAT2P40209 560 aa2.03□□□□□ -2.08
SMD1YGR074W LAM5P43560 674 aa2.03□□□□□ -2.08
SMD1YGR074W RTT101P47050 842 aa2.03□□□□□ -2.08
SMD1YGR074W YGR016WP53209 190 aa2.03□□□□□ -2.08
SMD1YGR074W ALF1P53904 254 aa2.03□□□□□ -2.08
SMD1YGR074W YPL107WQ02873 248 aa2.03□□□□□ -2.08
SMD1YGR074W MRP51Q02950 344 aa2.03□□□□□ -2.08
SMD1YGR074W YDR541CQ03049 344 aa2.03□□□□□ -2.08
SMD1YGR074W PIR3Q03180 325 aa2.03□□□□□ -2.08
SMD1YGR074W RSN1Q03516 953 aa2.03□□□□□ -2.08
SMD1YGR074W RPN9Q04062 393 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W TIM18Q08749 192 aa2.03□□□□□ -2.08
SMD1YGR074W DAP1Q12091 152 aa2.03□□□□□ -2.08
SMD1YGR074W NFI1Q12216 726 aa2.03□□□□□ -2.08
SMD1YGR074W PKH2Q12236 1081 aaKnown RBP2.03□□□□□ -2.08
SMD1YGR074W SRN2Q99176 213 aa2.03□□□□□ -2.08
SMD1YGR074W YPT1P01123 206 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W SAM1P10659 382 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W ATR1P13090 542 aa2.02□□□□□ -2.09
SMD1YGR074W ARO3P14843 370 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W ALG1P16661 449 aa2.02□□□□□ -2.09
SMD1YGR074W SAM2P19358 384 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W TRX1P22217 103 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W SLM5P25345 492 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W LSB5P25369 354 aa2.02□□□□□ -2.09
SMD1YGR074W SPS22P25380 463 aa2.02□□□□□ -2.09
SMD1YGR074W TIP1P27654 210 aaPredicted RBP2.02□□□□□ -2.09
SMD1YGR074W ANP1P32629 500 aa2.02□□□□□ -2.09
SMD1YGR074W COX13P32799 129 aa2.02□□□□□ -2.09
SMD1YGR074W PMU1P36069 295 aa2.02□□□□□ -2.09
SMD1YGR074W MRPL4P36517 319 aa2.02□□□□□ -2.09
SMD1YGR074W NAT2P37293 288 aa2.02□□□□□ -2.09
SMD1YGR074W RIB5P38145 238 aa2.02□□□□□ -2.09
SMD1YGR074W PCA1P38360 1216 aa2.02□□□□□ -2.09
SMD1YGR074W YND1P40009 630 aa2.02□□□□□ -2.09
SMD1YGR074W YFR016CP43597 1233 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W ASN2P49090 572 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W TOM22P49334 152 aa2.02□□□□□ -2.09
SMD1YGR074W PHB2P50085 310 aa2.02□□□□□ -2.09
SMD1YGR074W AVT4P50944 713 aa2.02□□□□□ -2.09
SMD1YGR074W ROG1P53118 685 aa2.02□□□□□ -2.09
SMD1YGR074W YNR048WP53740 393 aa2.02□□□□□ -2.09
SMD1YGR074W MMT1Q03218 510 aa2.02□□□□□ -2.09
SMD1YGR074W ERP1Q05359 219 aaKnown RBP2.02□□□□□ -2.09
SMD1YGR074W MDM30Q05930 598 aa2.02□□□□□ -2.09
SMD1YGR074W NDE2Q07500 545 aa2.02□□□□□ -2.09
SMD1YGR074W YFH1Q07540 174 aa2.02□□□□□ -2.09
SMD1YGR074W NSE1Q07913 336 aa2.02□□□□□ -2.09
SMD1YGR074W SKI7Q08491 747 aaPredicted RBP2.02□□□□□ -2.09
SMD1YGR074W YPR022CQ12139 1133 aa2.02□□□□□ -2.09
SMD1YGR074W ATG34Q12292 412 aa2.02□□□□□ -2.09
SMD1YGR074W RRD2Q12461 358 aa2.02□□□□□ -2.09
SMD1YGR074W TFB5Q3E7C1 72 aaPredicted RBP2.02□□□□□ -2.09
SMD1YGR074W CPR1P14832 162 aaKnown RBP2.01□□□□□ -2.09
SMD1YGR074W VMA2P16140 517 aaKnown RBP2.01□□□□□ -2.09
SMD1YGR074W KRR1P25586 316 aaPredicted RBP2.01□□□□□ -2.09
SMD1YGR074W GEX1P25596 615 aa2.01□□□□□ -2.09
SMD1YGR074W NRP1P32770 719 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SMD1YGR074W INM1P38710 295 aa2.01□□□□□ -2.09
SMD1YGR074W MNL1P38888 796 aa2.01□□□□□ -2.09
SMD1YGR074W STN1P38960 494 aa2.01□□□□□ -2.09
SMD1YGR074W MST28P39552 234 aa2.01□□□□□ -2.09
SMD1YGR074W RPH1P39956 796 aa2.01□□□□□ -2.09
SMD1YGR074W HAT2P39984 401 aa2.01□□□□□ -2.09
SMD1YGR074W YAT2P40017 923 aa2.01□□□□□ -2.09
SMD1YGR074W MMF1P40185 145 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms