RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C SLZ1P40167 298 aa4.71□□□□□ -1.66
SEC9YGR009C CSM2P40465 213 aa4.71□□□□□ -1.66
SEC9YGR009C DOT5P40553 215 aa4.71□□□□□ -1.66
SEC9YGR009C PMT6P42934 759 aa4.71□□□□□ -1.66
SEC9YGR009C UBP6P43593 499 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C FMP33P46998 180 aa4.71□□□□□ -1.66
SEC9YGR009C MOG1P47123 218 aa4.71□□□□□ -1.66
SEC9YGR009C RMD9P53140 646 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C RHO5P53879 331 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C SAE3P89114 91 aa4.71□□□□□ -1.66
SEC9YGR009C RPA49Q01080 415 aaPredicted RBP4.71□□□□□ -1.66
SEC9YGR009C YMR027WQ04371 470 aa4.71□□□□□ -1.66
SEC9YGR009C DCI1Q08558 271 aa4.71□□□□□ -1.66
SEC9YGR009C GLO4Q12320 285 aa4.71□□□□□ -1.66
SEC9YGR009C SPP41P38904 1435 aa4.71□□□□□ -1.66
SEC9YGR009C SPE1P08432 466 aa4.71□□□□□ -1.66
SEC9YGR009C URA6P15700 204 aa4.71□□□□□ -1.66
SEC9YGR009C PRE7P23724 241 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C UBC8P28263 218 aa4.71□□□□□ -1.66
SEC9YGR009C PYC2P32327 1180 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C HOG1P32485 435 aa4.71□□□□□ -1.66
SEC9YGR009C PET127P32606 800 aa4.71□□□□□ -1.66
SEC9YGR009C IMP3P32899 183 aaPredicted RBP4.71□□□□□ -1.66
SEC9YGR009C TAT1P38085 619 aa4.71□□□□□ -1.66
SEC9YGR009C THI2P38141 450 aa4.71□□□□□ -1.66
SEC9YGR009C RIB5P38145 238 aa4.71□□□□□ -1.66
SEC9YGR009C RFS1P38234 210 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C DER1P38307 211 aa4.71□□□□□ -1.66
SEC9YGR009C YBR287WP38355 427 aa4.71□□□□□ -1.66
SEC9YGR009C PRE3P38624 215 aa4.71□□□□□ -1.66
SEC9YGR009C DIA4P38705 446 aaPredicted RBP4.71□□□□□ -1.66
SEC9YGR009C SEO1P39709 593 aa4.71□□□□□ -1.66
SEC9YGR009C EAF5P39995 279 aa4.71□□□□□ -1.66
SEC9YGR009C PSF2P40359 213 aa4.71□□□□□ -1.66
SEC9YGR009C PAC11P40960 533 aa4.71□□□□□ -1.66
SEC9YGR009C COS5P47187 383 aa4.71□□□□□ -1.66
SEC9YGR009C AZR1P50080 613 aa4.71□□□□□ -1.66
SEC9YGR009C ARI1P53111 347 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C NOP19P53317 196 aaPredicted RBP4.71□□□□□ -1.66
SEC9YGR009C NOG2P53742 486 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C ATG4P53867 494 aa4.71□□□□□ -1.66
SEC9YGR009C IMP4P53941 290 aaKnown RBP4.71□□□□□ -1.66
SEC9YGR009C CDC73Q06697 393 aa4.71□□□□□ -1.66
SEC9YGR009C YNG1Q08465 219 aa4.71□□□□□ -1.66
SEC9YGR009C RTK1Q12100 620 aaPredicted RBP4.71□□□□□ -1.66
SEC9YGR009C APC9Q12107 265 aa4.71□□□□□ -1.66
SEC9YGR009C TMS1Q12116 473 aa4.71□□□□□ -1.66
SEC9YGR009C YPL150WQ12152 901 aa4.71□□□□□ -1.66
SEC9YGR009C YOR214CQ12282 236 aa4.71□□□□□ -1.66
SEC9YGR009C ATG34Q12292 412 aa4.71□□□□□ -1.66
SEC9YGR009C YBR126W-AQ8TGU7 68 aa4.71□□□□□ -1.66
SEC9YGR009C SRB8P25648 1427 aa4.7□□□□□ -1.66
SEC9YGR009C CDC28P00546 298 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C RPS21AP0C0V8 87 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C ZWF1P11412 505 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C CLN3P13365 580 aa4.7□□□□□ -1.66
SEC9YGR009C PMR1P13586 950 aa4.7□□□□□ -1.66
SEC9YGR009C SAR1P20606 190 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C PPH22P23595 377 aa4.7□□□□□ -1.66
SEC9YGR009C RPL24BP24000 155 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C DAL2P25335 343 aa4.7□□□□□ -1.66
SEC9YGR009C HCM1P25364 564 aa4.7□□□□□ -1.66
SEC9YGR009C NFS1P25374 497 aa4.7□□□□□ -1.66
SEC9YGR009C PMT2P31382 759 aa4.7□□□□□ -1.66
SEC9YGR009C PRP18P33411 251 aaPredicted RBP4.7□□□□□ -1.66
SEC9YGR009C TSA1P34760 196 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C RCN1P36054 211 aa4.7□□□□□ -1.66
SEC9YGR009C RIB1P38066 345 aa4.7□□□□□ -1.66
SEC9YGR009C AKR1P39010 764 aa4.7□□□□□ -1.66
SEC9YGR009C PCF11P39081 626 aaPredicted RBP4.7□□□□□ -1.66
SEC9YGR009C YEL020CP39994 560 aa4.7□□□□□ -1.66
SEC9YGR009C SCS2P40075 244 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C RGD2P43556 714 aa4.7□□□□□ -1.66
SEC9YGR009C YGR017WP53210 297 aa4.7□□□□□ -1.66
SEC9YGR009C RHO3Q00245 231 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C MTG1Q03151 367 aaPredicted RBP4.7□□□□□ -1.66
SEC9YGR009C YMR209CQ03648 457 aa4.7□□□□□ -1.66
SEC9YGR009C SMA2Q04658 369 aa4.7□□□□□ -1.66
SEC9YGR009C CRR1Q05790 422 aa4.7□□□□□ -1.66
SEC9YGR009C STE23Q06010 1027 aa4.7□□□□□ -1.66
SEC9YGR009C FRQ1Q06389 190 aa4.7□□□□□ -1.66
SEC9YGR009C YLR036CQ07986 203 aa4.7□□□□□ -1.66
SEC9YGR009C BTS1Q12051 335 aa4.7□□□□□ -1.66
SEC9YGR009C BAG7Q12128 409 aa4.7□□□□□ -1.66
SEC9YGR009C RRP42Q12277 265 aaPredicted RBP4.7□□□□□ -1.66
SEC9YGR009C FMP16Q12497 93 aa4.7□□□□□ -1.66
SEC9YGR009C YCL012CQ8J0M4 134 aa4.7□□□□□ -1.66
SEC9YGR009C SIR4P11978 1358 aa4.7□□□□□ -1.66
SEC9YGR009C ADE6P38972 1358 aaKnown RBP4.7□□□□□ -1.66
SEC9YGR009C ATP2P00830 511 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RHO1P06780 209 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RNR3P21672 869 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C BCK2P33306 851 aa4.69□□□□□ -1.66
SEC9YGR009C TIP20P33891 701 aa4.69□□□□□ -1.66
SEC9YGR009C PRX1P34227 261 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C SPC34P36131 295 aa4.69□□□□□ -1.66
SEC9YGR009C TVP38P36164 337 aa4.69□□□□□ -1.66
SEC9YGR009C MRPL4P36517 319 aa4.69□□□□□ -1.66
SEC9YGR009C SRO77P38163 1010 aa4.69□□□□□ -1.66
SEC9YGR009C CST26P38226 397 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms