RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeastyeast

Gene IRC4, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC4YDR540C CLB1P24868 471 aa2.29□□□□□ -2.04
IRC4YDR540C LSB5P25369 354 aa2.29□□□□□ -2.04
IRC4YDR540C SMY1P32364 656 aaKnown RBP2.29□□□□□ -2.04
IRC4YDR540C APE3P37302 537 aaKnown RBP2.29□□□□□ -2.04
IRC4YDR540C SLM4P38247 162 aa2.29□□□□□ -2.04
IRC4YDR540C RRT2P38332 387 aa2.29□□□□□ -2.04
IRC4YDR540C FAA2P39518 744 aa2.29□□□□□ -2.04
IRC4YDR540C YFL067WP43537 175 aa2.29□□□□□ -2.04
IRC4YDR540C CAK1P43568 368 aaPredicted RBP2.29□□□□□ -2.04
IRC4YDR540C TCB2P48231 1178 aa2.29□□□□□ -2.04
IRC4YDR540C TOM22P49334 152 aa2.29□□□□□ -2.04
IRC4YDR540C FRE4P53746 719 aa2.29□□□□□ -2.04
IRC4YDR540C GPI15P53961 229 aa2.29□□□□□ -2.04
IRC4YDR540C MEH1Q02205 184 aa2.29□□□□□ -2.04
IRC4YDR540C TAF12Q03761 539 aa2.29□□□□□ -2.04
IRC4YDR540C ACL4Q03771 387 aa2.29□□□□□ -2.04
IRC4YDR540C PBA1Q05778 276 aa2.29□□□□□ -2.04
IRC4YDR540C MMR1Q06324 491 aa2.29□□□□□ -2.04
IRC4YDR540C SKI7Q08491 747 aaPredicted RBP2.29□□□□□ -2.04
IRC4YDR540C YOR387CQ08910 206 aa2.29□□□□□ -2.04
IRC4YDR540C RMD5Q12508 421 aa2.29□□□□□ -2.04
IRC4YDR540C HHF1P02309 103 aaKnown RBP2.28□□□□□ -2.04
IRC4YDR540C CPR4P25334 318 aa2.28□□□□□ -2.04
IRC4YDR540C SPS22P25380 463 aa2.28□□□□□ -2.04
IRC4YDR540C ERV1P27882 189 aa2.28□□□□□ -2.04
IRC4YDR540C TFB1P32776 642 aa2.28□□□□□ -2.04
IRC4YDR540C YBL059WP34224 193 aa2.28□□□□□ -2.04
IRC4YDR540C REE1P40893 198 aa2.28□□□□□ -2.04
IRC4YDR540C PHO86P46956 311 aa2.28□□□□□ -2.04
IRC4YDR540C HMS2P47175 358 aa2.28□□□□□ -2.04
IRC4YDR540C YGL242CP53066 181 aa2.28□□□□□ -2.04
IRC4YDR540C GOR1P53839 350 aa2.28□□□□□ -2.04
IRC4YDR540C ELP3Q02908 557 aaKnown RBP2.28□□□□□ -2.04
IRC4YDR540C GIP3Q03016 1276 aa2.28□□□□□ -2.04
IRC4YDR540C YMR181CQ03231 154 aa2.28□□□□□ -2.04
IRC4YDR540C DCS1Q06151 350 aa2.28□□□□□ -2.04
IRC4YDR540C DIS3Q08162 1001 aaKnown RBP2.28□□□□□ -2.04
IRC4YDR540C REX4Q08237 289 aa2.28□□□□□ -2.04
IRC4YDR540C TMS1Q12116 473 aa2.28□□□□□ -2.04
IRC4YDR540C YLR108CQ12259 485 aa2.28□□□□□ -2.04
IRC4YDR540C TY1B-AO13527 1196 aaKnown RBP2.27□□□□□ -2.05
IRC4YDR540C COX3P00420 269 aa2.27□□□□□ -2.05
IRC4YDR540C SRV2P17555 526 aaKnown RBP2.27□□□□□ -2.05
IRC4YDR540C NAM9P27929 486 aa2.27□□□□□ -2.05
IRC4YDR540C ARO2P28777 376 aaKnown RBP2.27□□□□□ -2.05
IRC4YDR540C BRF1P29056 596 aa2.27□□□□□ -2.05
IRC4YDR540C KKQ8P36004 724 aa2.27□□□□□ -2.05
IRC4YDR540C RIB5P38145 238 aa2.27□□□□□ -2.05
IRC4YDR540C RRN10P38204 145 aa2.27□□□□□ -2.05
IRC4YDR540C MMS4P38257 691 aa2.27□□□□□ -2.05
IRC4YDR540C PRM5P40476 318 aa2.27□□□□□ -2.05
IRC4YDR540C YGR210CP42942 411 aa2.27□□□□□ -2.05
IRC4YDR540C CWC22P53333 577 aaKnown RBP2.27□□□□□ -2.05
IRC4YDR540C RPT4P53549 437 aaKnown RBP2.27□□□□□ -2.05
IRC4YDR540C TOF1P53840 1238 aa2.27□□□□□ -2.05
IRC4YDR540C OCA2P53949 197 aa2.27□□□□□ -2.05
IRC4YDR540C HXT11P54862 567 aa2.27□□□□□ -2.05
IRC4YDR540C RSN1Q03516 953 aa2.27□□□□□ -2.05
IRC4YDR540C YMR130WQ04223 302 aa2.27□□□□□ -2.05
IRC4YDR540C AIM32Q04689 311 aa2.27□□□□□ -2.05
IRC4YDR540C MRPL35Q06678 367 aa2.27□□□□□ -2.05
IRC4YDR540C TSR1Q07381 788 aaKnown RBP2.27□□□□□ -2.05
IRC4YDR540C SRL2Q12020 392 aa2.27□□□□□ -2.05
IRC4YDR540C MED2Q12124 431 aa2.27□□□□□ -2.05
IRC4YDR540C TEF1P02994 458 aaKnown RBP2.26□□□□□ -2.05
IRC4YDR540C ADE4P04046 510 aaKnown RBP2.26□□□□□ -2.05
IRC4YDR540C SPO12P17123 173 aa2.26□□□□□ -2.05
IRC4YDR540C CPR2P23285 205 aa2.26□□□□□ -2.05
IRC4YDR540C DEG1P31115 442 aaKnown RBP2.26□□□□□ -2.05
IRC4YDR540C DBF4P32325 704 aa2.26□□□□□ -2.05
IRC4YDR540C SWI3P32591 825 aa2.26□□□□□ -2.05
IRC4YDR540C SDH3P33421 198 aa2.26□□□□□ -2.05
IRC4YDR540C PAD1P33751 242 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
IRC4YDR540C SWH1P35845 1188 aa2.26□□□□□ -2.05
IRC4YDR540C RRP4P38792 359 aaKnown RBP2.26□□□□□ -2.05
IRC4YDR540C NDT80P38830 627 aa2.26□□□□□ -2.05
IRC4YDR540C MTC6P38849 526 aa2.26□□□□□ -2.05
IRC4YDR540C PCF11P39081 626 aaPredicted RBP2.26□□□□□ -2.05
IRC4YDR540C SER3P40054 469 aa2.26□□□□□ -2.05
IRC4YDR540C NCA3P46955 337 aa2.26□□□□□ -2.05
IRC4YDR540C HOT1Q03213 719 aa2.26□□□□□ -2.05
IRC4YDR540C BET5Q03630 159 aa2.26□□□□□ -2.05
IRC4YDR540C PPM1Q04081 328 aa2.26□□□□□ -2.05
IRC4YDR540C HEL2Q05580 639 aaKnown RBP2.26□□□□□ -2.05
IRC4YDR540C SNX3Q08826 162 aaKnown RBP2.26□□□□□ -2.05
IRC4YDR540C TRP1P00912 224 aa2.25□□□□□ -2.05
IRC4YDR540C SUP35P05453 685 aaKnown RBP2.25□□□□□ -2.05
IRC4YDR540C IMA3P0CW40 589 aa2.25□□□□□ -2.05
IRC4YDR540C IMA4P0CW41 589 aa2.25□□□□□ -2.05
IRC4YDR540C MDH1P17505 334 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
IRC4YDR540C ISY1P21374 235 aaPredicted RBP2.25□□□□□ -2.05
IRC4YDR540C SLY1P22213 666 aa2.25□□□□□ -2.05
IRC4YDR540C RAD57P25301 460 aa2.25□□□□□ -2.05
IRC4YDR540C EBP2P36049 427 aaKnown RBP2.25□□□□□ -2.05
IRC4YDR540C SDS24P38314 527 aa2.25□□□□□ -2.05
IRC4YDR540C SRP72P38688 640 aaKnown RBP2.25□□□□□ -2.05
IRC4YDR540C VHS2P40463 436 aa2.25□□□□□ -2.05
IRC4YDR540C ZIM17P42844 174 aa2.25□□□□□ -2.05
IRC4YDR540C WWM1P43582 211 aaKnown RBP2.25□□□□□ -2.05
IRC4YDR540C AZR1P50080 613 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms