RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W ADE8P04161 214 aa3.22□□□□□ -1.89
SIZ1YDR409W RPL6BP05739 176 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W MDH1P17505 334 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SIZ1YDR409W PAT1P25644 796 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W APE2P32454 952 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W FRE1P32791 686 aa3.22□□□□□ -1.89
SIZ1YDR409W WBP1P33767 430 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W HCS1P34243 683 aa3.22□□□□□ -1.89
SIZ1YDR409W DAD2P36162 133 aa3.22□□□□□ -1.89
SIZ1YDR409W IST2P38250 946 aa3.22□□□□□ -1.89
SIZ1YDR409W TDP1P38319 544 aa3.22□□□□□ -1.89
SIZ1YDR409W CBR1P38626 284 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W SBE22P38814 852 aa3.22□□□□□ -1.89
SIZ1YDR409W EGD2P38879 174 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W YJL070CP40361 888 aa3.22□□□□□ -1.89
SIZ1YDR409W PAC11P40960 533 aa3.22□□□□□ -1.89
SIZ1YDR409W CDC40P40968 455 aaPredicted RBP3.22□□□□□ -1.89
SIZ1YDR409W RAI1P53063 387 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W COG1P53079 417 aa3.22□□□□□ -1.89
SIZ1YDR409W LCL3P53153 274 aa3.22□□□□□ -1.89
SIZ1YDR409W CLD1P53264 445 aa3.22□□□□□ -1.89
SIZ1YDR409W YNL143CP53908 130 aa3.22□□□□□ -1.89
SIZ1YDR409W KTR6P54070 446 aa3.22□□□□□ -1.89
SIZ1YDR409W EFR3Q03653 782 aaKnown RBP3.22□□□□□ -1.89
SIZ1YDR409W BOP2Q06150 570 aa3.22□□□□□ -1.89
SIZ1YDR409W RSB1Q08417 382 aa3.22□□□□□ -1.89
SIZ1YDR409W ATG29Q12092 213 aa3.22□□□□□ -1.89
SIZ1YDR409W BAG7Q12128 409 aa3.22□□□□□ -1.89
SIZ1YDR409W NSL1Q12143 216 aa3.22□□□□□ -1.89
SIZ1YDR409W COX17Q12287 69 aa3.22□□□□□ -1.89
SIZ1YDR409W ISA2Q12425 185 aa3.22□□□□□ -1.89
SIZ1YDR409W STE3P06783 470 aa3.21□□□□□ -1.89
SIZ1YDR409W NMT1P14743 455 aa3.21□□□□□ -1.89
SIZ1YDR409W YSP3P25036 478 aa3.21□□□□□ -1.89
SIZ1YDR409W ERG6P25087 383 aaKnown RBP3.21□□□□□ -1.89
SIZ1YDR409W RVS161P25343 265 aaKnown RBP3.21□□□□□ -1.89
SIZ1YDR409W ELO2P25358 347 aa3.21□□□□□ -1.89
SIZ1YDR409W HRR25P29295 494 aaKnown RBP3.21□□□□□ -1.89
SIZ1YDR409W FAA1P30624 700 aaKnown RBP3.21□□□□□ -1.89
SIZ1YDR409W SYN8P31377 255 aa3.21□□□□□ -1.89
SIZ1YDR409W PRO1P32264 428 aa3.21□□□□□ -1.89
SIZ1YDR409W PTC1P35182 281 aa3.21□□□□□ -1.89
SIZ1YDR409W MNN2P38069 597 aa3.21□□□□□ -1.89
SIZ1YDR409W ECM13P38195 257 aa3.21□□□□□ -1.89
SIZ1YDR409W ECM8P38246 354 aa3.21□□□□□ -1.89
SIZ1YDR409W QNS1P38795 714 aaKnown RBP3.21□□□□□ -1.89
SIZ1YDR409W GSM1P42950 618 aa3.21□□□□□ -1.89
SIZ1YDR409W GLG2P47011 380 aa3.21□□□□□ -1.89
SIZ1YDR409W CWC23P52868 283 aaPredicted RBP3.21□□□□□ -1.89
SIZ1YDR409W SAP4P53036 818 aa3.21□□□□□ -1.89
SIZ1YDR409W LIF1P53150 421 aa3.21□□□□□ -1.89
SIZ1YDR409W CUL3P53202 744 aa3.21□□□□□ -1.89
SIZ1YDR409W SOL4P53315 255 aa3.21□□□□□ -1.89
SIZ1YDR409W YNL095CP53932 642 aa3.21□□□□□ -1.89
SIZ1YDR409W RIM13Q03792 727 aa3.21□□□□□ -1.89
SIZ1YDR409W YMR160WQ03823 816 aa3.21□□□□□ -1.89
SIZ1YDR409W SSL1Q04673 461 aaPredicted RBP3.21□□□□□ -1.89
SIZ1YDR409W COX20Q04935 205 aa3.21□□□□□ -1.89
SIZ1YDR409W TRI1Q05024 226 aa3.21□□□□□ -1.89
SIZ1YDR409W YLR456WQ06199 204 aa3.21□□□□□ -1.89
SIZ1YDR409W YLR413WQ06689 675 aa3.21□□□□□ -1.89
SIZ1YDR409W YOL019WQ08157 551 aa3.21□□□□□ -1.89
SIZ1YDR409W DCP1Q12517 231 aaPredicted RBP3.21□□□□□ -1.89
SIZ1YDR409W PUT2P07275 575 aa3.21□□□□□ -1.9
SIZ1YDR409W MER1P16523 270 aa3.21□□□□□ -1.9
SIZ1YDR409W SEN2P16658 377 aa3.21□□□□□ -1.9
SIZ1YDR409W GID7P25569 745 aa3.21□□□□□ -1.9
SIZ1YDR409W PTC6P25646 442 aa3.21□□□□□ -1.9
SIZ1YDR409W PEX3P28795 441 aa3.21□□□□□ -1.9
SIZ1YDR409W HXT3P32466 567 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W APN2P38207 520 aa3.21□□□□□ -1.9
SIZ1YDR409W SOP4P39543 234 aaPredicted RBP3.21□□□□□ -1.9
SIZ1YDR409W AVT2P39981 480 aa3.21□□□□□ -1.9
SIZ1YDR409W YAT2P40017 923 aa3.21□□□□□ -1.9
SIZ1YDR409W JLP2P40206 208 aa3.21□□□□□ -1.9
SIZ1YDR409W ATF1P40353 525 aa3.21□□□□□ -1.9
SIZ1YDR409W YIL054WP40524 105 aa3.21□□□□□ -1.9
SIZ1YDR409W NEO1P40527 1151 aa3.21□□□□□ -1.9
SIZ1YDR409W PRM2P40534 656 aa3.21□□□□□ -1.9
SIZ1YDR409W ALK1P43633 760 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W AVT1P47082 602 aa3.21□□□□□ -1.9
SIZ1YDR409W ASN1P49089 572 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W TOM22P49334 152 aa3.21□□□□□ -1.9
SIZ1YDR409W YGL185CP53100 379 aa3.21□□□□□ -1.9
SIZ1YDR409W YGL039WP53183 348 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W YNL010WP53981 241 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W PFA5Q03289 374 aa3.21□□□□□ -1.9
SIZ1YDR409W SLD5Q03406 294 aa3.21□□□□□ -1.9
SIZ1YDR409W YDR514CQ04408 483 aa3.21□□□□□ -1.9
SIZ1YDR409W ECM30Q06673 1274 aa3.21□□□□□ -1.9
SIZ1YDR409W ESA1Q08649 445 aa3.21□□□□□ -1.9
SIZ1YDR409W ATP16Q12165 160 aa3.21□□□□□ -1.9
SIZ1YDR409W YBL029C-AQ3E756 94 aa3.21□□□□□ -1.9
SIZ1YDR409W LAA1P39526 2014 aa3.21□□□□□ -1.9
SIZ1YDR409W COX3P00420 269 aa3.21□□□□□ -1.9
SIZ1YDR409W GPM1P00950 247 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W CBP2P03874 630 aaPredicted RBP3.21□□□□□ -1.9
SIZ1YDR409W PDE2P06776 526 aa3.21□□□□□ -1.9
SIZ1YDR409W PMI40P29952 429 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W RGT1P32862 1170 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms