RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C INA17Q02888 182 aa3.26□□□□□ -1.89
CDC40YDR364C DPB4Q04603 196 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C HEL2Q05580 639 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C ORM2Q06144 216 aa3.26□□□□□ -1.89
CDC40YDR364C VTA1Q06263 330 aa3.26□□□□□ -1.89
CDC40YDR364C RKI1Q12189 258 aa3.26□□□□□ -1.89
CDC40YDR364C EMP46Q12396 444 aa3.26□□□□□ -1.89
CDC40YDR364C YDR524C-BQ3E6R4 66 aa3.26□□□□□ -1.89
CDC40YDR364C ISN1Q99312 450 aa3.26□□□□□ -1.89
CDC40YDR364C BI3Q9ZZW7 517 aa3.26□□□□□ -1.89
CDC40YDR364C RAD1P06777 1100 aa3.25□□□□□ -1.89
CDC40YDR364C RPC40P07703 335 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C HEM1P09950 548 aaPredicted RBP3.25□□□□□ -1.89
CDC40YDR364C AMD2P22580 549 aa3.25□□□□□ -1.89
CDC40YDR364C ADH7P25377 361 aa3.25□□□□□ -1.89
CDC40YDR364C CNE1P27825 502 aa3.25□□□□□ -1.89
CDC40YDR364C GAC1P28006 793 aa3.25□□□□□ -1.89
CDC40YDR364C KDX1P36005 433 aa3.25□□□□□ -1.89
CDC40YDR364C RPC37P36121 282 aa3.25□□□□□ -1.89
CDC40YDR364C SHE3P38272 425 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C MMS21P38632 267 aa3.25□□□□□ -1.89
CDC40YDR364C GND1P38720 489 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C WSS1P38838 269 aa3.25□□□□□ -1.89
CDC40YDR364C MRX1P40050 688 aa3.25□□□□□ -1.89
CDC40YDR364C PTR3P43606 678 aa3.25□□□□□ -1.89
CDC40YDR364C NMD5P46970 1048 aa3.25□□□□□ -1.89
CDC40YDR364C DPB11P47027 764 aaPredicted RBP3.25□□□□□ -1.89
CDC40YDR364C GIS2P53849 153 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
CDC40YDR364C YNL247WP53852 767 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C YNL144CP53907 740 aa3.25□□□□□ -1.89
CDC40YDR364C RPC11Q04307 110 aaPredicted RBP3.25□□□□□ -1.89
CDC40YDR364C CRT10Q08226 957 aa3.25□□□□□ -1.89
CDC40YDR364C RUD3Q12234 484 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C YKL068W-AQ3E826 78 aa3.25□□□□□ -1.89
CDC40YDR364C FKS1P38631 1876 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C AAC1P04710 309 aa3.25□□□□□ -1.89
CDC40YDR364C RAD10P06838 210 aa3.25□□□□□ -1.89
CDC40YDR364C MRP13P12686 339 aa3.25□□□□□ -1.89
CDC40YDR364C PUT4P15380 627 aa3.25□□□□□ -1.89
CDC40YDR364C SLY1P22213 666 aa3.25□□□□□ -1.89
CDC40YDR364C PPH22P23595 377 aa3.25□□□□□ -1.89
CDC40YDR364C YSP3P25036 478 aa3.25□□□□□ -1.89
CDC40YDR364C PHO84P25297 587 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C GSH1P32477 678 aa3.25□□□□□ -1.89
CDC40YDR364C SSE2P32590 693 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C GDA1P32621 518 aa3.25□□□□□ -1.89
CDC40YDR364C FRE1P32791 686 aa3.25□□□□□ -1.89
CDC40YDR364C MRE11P32829 692 aa3.25□□□□□ -1.89
CDC40YDR364C YME2P32843 850 aa3.25□□□□□ -1.89
CDC40YDR364C SRB2P34162 210 aa3.25□□□□□ -1.89
CDC40YDR364C TIF3P34167 436 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C YBR144CP34215 104 aa3.25□□□□□ -1.89
CDC40YDR364C HES1P35843 434 aa3.25□□□□□ -1.89
CDC40YDR364C DAD2P36162 133 aa3.25□□□□□ -1.89
CDC40YDR364C SIF2P38262 535 aa3.25□□□□□ -1.89
CDC40YDR364C VHC1P38329 1120 aa3.25□□□□□ -1.89
CDC40YDR364C POP4P38336 279 aa3.25□□□□□ -1.89
CDC40YDR364C SEC31P38968 1273 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C DSE1P40077 573 aa3.25□□□□□ -1.89
CDC40YDR364C PCL7P40186 285 aa3.25□□□□□ -1.89
CDC40YDR364C YMR134WP40207 237 aa3.25□□□□□ -1.89
CDC40YDR364C LAS21P40367 830 aa3.25□□□□□ -1.89
CDC40YDR364C INA22P40576 216 aa3.25□□□□□ -1.89
CDC40YDR364C PMT6P42934 759 aa3.25□□□□□ -1.89
CDC40YDR364C ASG7P46993 209 aa3.25□□□□□ -1.89
CDC40YDR364C MSY1P48527 492 aa3.25□□□□□ -1.89
CDC40YDR364C COG2P53271 262 aa3.25□□□□□ -1.89
CDC40YDR364C YGR127WP53275 312 aa3.25□□□□□ -1.89
CDC40YDR364C SNF12P53628 566 aa3.25□□□□□ -1.89
CDC40YDR364C RPL22BP56628 122 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C STE23Q06010 1027 aa3.25□□□□□ -1.89
CDC40YDR364C YDL073WQ07454 984 aa3.25□□□□□ -1.89
CDC40YDR364C DIS3Q08162 1001 aaKnown RBP3.25□□□□□ -1.89
CDC40YDR364C THI20Q08224 551 aa3.25□□□□□ -1.89
CDC40YDR364C YPL272CQ08984 517 aa3.25□□□□□ -1.89
CDC40YDR364C TAF10Q12030 206 aa3.25□□□□□ -1.89
CDC40YDR364C YDR018CQ12185 396 aa3.25□□□□□ -1.89
CDC40YDR364C SKS1Q12505 502 aa3.25□□□□□ -1.89
CDC40YDR364C ARG4P04076 463 aaPredicted RBP3.24□□□□□ -1.89
CDC40YDR364C HAP2P06774 265 aa3.24□□□□□ -1.89
CDC40YDR364C KGD2P19262 463 aaPredicted RBP3.24□□□□□ -1.89
CDC40YDR364C KGD1P20967 1014 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C IMG1P25626 169 aa3.24□□□□□ -1.89
CDC40YDR364C BUD14P27637 709 aa3.24□□□□□ -1.89
CDC40YDR364C MRPL9P31334 269 aa3.24□□□□□ -1.89
CDC40YDR364C HXT3P32466 567 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C ICS2P38284 255 aa3.24□□□□□ -1.89
CDC40YDR364C SWC5P38326 303 aa3.24□□□□□ -1.89
CDC40YDR364C DIA4P38705 446 aaPredicted RBP3.24□□□□□ -1.89
CDC40YDR364C RRF1P38771 230 aa3.24□□□□□ -1.89
CDC40YDR364C CIN4P39110 191 aa3.24□□□□□ -1.89
CDC40YDR364C AVT2P39981 480 aa3.24□□□□□ -1.89
CDC40YDR364C YIL054WP40524 105 aa3.24□□□□□ -1.89
CDC40YDR364C MKT1P40850 830 aaKnown RBP3.24□□□□□ -1.89
CDC40YDR364C FAR3P46671 204 aa3.24□□□□□ -1.89
CDC40YDR364C GUF1P46943 645 aa3.24□□□□□ -1.89
CDC40YDR364C YGL117WP53133 265 aa3.24□□□□□ -1.89
CDC40YDR364C IST1P53843 298 aaPredicted RBP3.24□□□□□ -1.89
CDC40YDR364C YNL040WP53960 456 aaPredicted RBP3.24□□□□□ -1.89
CDC40YDR364C BET4Q00618 327 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms