RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C SYO1Q07395 620 aa3.25□□□□□ -1.89
RRP42YDL111C PML1Q07930 204 aaPredicted RBP3.25□□□□□ -1.89
RRP42YDL111C REX4Q08237 289 aa3.25□□□□□ -1.89
RRP42YDL111C BSC1Q12140 328 aa3.25□□□□□ -1.89
RRP42YDL111C YDL009CQ12210 107 aa3.25□□□□□ -1.89
RRP42YDL111C RKM5Q12367 367 aa3.25□□□□□ -1.89
RRP42YDL111C YPT1P01123 206 aaKnown RBP3.24□□□□□ -1.89
RRP42YDL111C RAD57P25301 460 aa3.24□□□□□ -1.89
RRP42YDL111C CTR86P25355 563 aa3.24□□□□□ -1.89
RRP42YDL111C FRE1P32791 686 aa3.24□□□□□ -1.89
RRP42YDL111C SRB2P34162 210 aa3.24□□□□□ -1.89
RRP42YDL111C RRP4P38792 359 aaKnown RBP3.24□□□□□ -1.89
RRP42YDL111C GPI16P38875 610 aa3.24□□□□□ -1.89
RRP42YDL111C ELP2P42935 788 aa3.24□□□□□ -1.89
RRP42YDL111C ROG1P53118 685 aa3.24□□□□□ -1.89
RRP42YDL111C YNR068CP53754 272 aa3.24□□□□□ -1.89
RRP42YDL111C TDA7P53882 636 aaPredicted RBP3.24□□□□□ -1.89
RRP42YDL111C YNL143CP53908 130 aa3.24□□□□□ -1.89
RRP42YDL111C PRO2P54885 456 aaKnown RBP3.24□□□□□ -1.89
RRP42YDL111C IRC15Q02733 499 aa3.24□□□□□ -1.89
RRP42YDL111C GIP3Q03016 1276 aa3.24□□□□□ -1.89
RRP42YDL111C PRP3Q03338 469 aaPredicted RBP3.24□□□□□ -1.89
RRP42YDL111C MRPL51Q06090 140 aaPredicted RBP3.24□□□□□ -1.89
RRP42YDL111C SGT1Q08446 395 aa3.24□□□□□ -1.89
RRP42YDL111C NRT1Q08485 598 aa3.24□□□□□ -1.89
RRP42YDL111C YLL056CQ12177 298 aa3.24□□□□□ -1.89
RRP42YDL111C ATG34Q12292 412 aa3.24□□□□□ -1.89
RRP42YDL111C ILV5P06168 395 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C YCP4P25349 247 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C CRM1P30822 1084 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C ERG1P32476 496 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C CYS4P32582 507 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C NRP1P32770 719 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RRP42YDL111C SUR1P33300 382 aa3.23□□□□□ -1.89
RRP42YDL111C RSM22P36056 628 aa3.23□□□□□ -1.89
RRP42YDL111C RIM2P38127 377 aa3.23□□□□□ -1.89
RRP42YDL111C YBL028CP38202 106 aa3.23□□□□□ -1.89
RRP42YDL111C KAP104P38217 918 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C INM1P38710 295 aa3.23□□□□□ -1.89
RRP42YDL111C MEP1P40260 492 aa3.23□□□□□ -1.89
RRP42YDL111C YIR014WP40570 242 aa3.23□□□□□ -1.89
RRP42YDL111C MDV1P47025 714 aa3.23□□□□□ -1.89
RRP42YDL111C MPP10P47083 593 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C YIP1P53039 248 aa3.23□□□□□ -1.89
RRP42YDL111C PCP1P53259 346 aa3.23□□□□□ -1.89
RRP42YDL111C PRM1P53835 661 aa3.23□□□□□ -1.89
RRP42YDL111C GPI15P53961 229 aa3.23□□□□□ -1.89
RRP42YDL111C UTP6Q02354 440 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C YLR281CQ05863 155 aa3.23□□□□□ -1.89
RRP42YDL111C SPH1Q06160 661 aa3.23□□□□□ -1.89
RRP42YDL111C NOP6Q07623 225 aaKnown RBP3.23□□□□□ -1.89
RRP42YDL111C MLH2Q07980 695 aa3.23□□□□□ -1.89
RRP42YDL111C SKI7Q08491 747 aaPredicted RBP3.23□□□□□ -1.89
RRP42YDL111C CDC21P06785 304 aa3.22□□□□□ -1.89
RRP42YDL111C NFT1P0CE68 1218 aa3.22□□□□□ -1.89
RRP42YDL111C YAR066WP0CX18 203 aa3.22□□□□□ -1.89
RRP42YDL111C YHR214WP0CX19 203 aa3.22□□□□□ -1.89
RRP42YDL111C RPL42AP0CX27 106 aaKnown RBP3.22□□□□□ -1.89
RRP42YDL111C RPL42BP0CX28 106 aaKnown RBP3.22□□□□□ -1.89
RRP42YDL111C QDR3P38227 689 aa3.22□□□□□ -1.89
RRP42YDL111C MNL1P38888 796 aa3.22□□□□□ -1.89
RRP42YDL111C YDR089WP38966 869 aa3.22□□□□□ -1.89
RRP42YDL111C VPS52P39904 641 aa3.22□□□□□ -1.89
RRP42YDL111C ISC1P40015 477 aaKnown RBP3.22□□□□□ -1.89
RRP42YDL111C PCL7P40186 285 aa3.22□□□□□ -1.89
RRP42YDL111C YIP5P53108 310 aa3.22□□□□□ -1.89
RRP42YDL111C RTT102P53330 157 aa3.22□□□□□ -1.89
RRP42YDL111C ODC1Q03028 310 aa3.22□□□□□ -1.89
RRP42YDL111C YMR087WQ04299 284 aa3.22□□□□□ -1.89
RRP42YDL111C RBA50Q04418 439 aa3.22□□□□□ -1.89
RRP42YDL111C AAD15Q08361 143 aa3.22□□□□□ -1.89
RRP42YDL111C SFG1Q12507 346 aa3.22□□□□□ -1.89
RRP42YDL111C CHS1P08004 1131 aa3.21□□□□□ -1.9
RRP42YDL111C SCH9P11792 824 aaKnown RBP3.21□□□□□ -1.9
RRP42YDL111C YSC83P32792 385 aa3.21□□□□□ -1.9
RRP42YDL111C FRE2P36033 711 aa3.21□□□□□ -1.9
RRP42YDL111C EBP2P36049 427 aaKnown RBP3.21□□□□□ -1.9
RRP42YDL111C YCR041WP37265 110 aa3.21□□□□□ -1.9
RRP42YDL111C MSG5P38590 489 aa3.21□□□□□ -1.9
RRP42YDL111C RTT107P38850 1070 aa3.21□□□□□ -1.9
RRP42YDL111C LYS1P38998 373 aaRIP-Chip data3.21□□□□□ -1.9not detected
RRP42YDL111C YER079WP40052 210 aaKnown RBP3.21□□□□□ -1.9
RRP42YDL111C YIR016WP40572 265 aa3.21□□□□□ -1.9
RRP42YDL111C DIM1P41819 318 aaKnown RBP3.21□□□□□ -1.9
RRP42YDL111C GWT1P47026 490 aa3.21□□□□□ -1.9
RRP42YDL111C HMS2P47175 358 aa3.21□□□□□ -1.9
RRP42YDL111C SSN8P47821 323 aa3.21□□□□□ -1.9
RRP42YDL111C LSC1P53598 329 aaKnown RBP3.21□□□□□ -1.9
RRP42YDL111C MMT1Q03218 510 aa3.21□□□□□ -1.9
RRP42YDL111C RSN1Q03516 953 aa3.21□□□□□ -1.9
RRP42YDL111C NUP53Q03790 475 aa3.21□□□□□ -1.9
RRP42YDL111C YDR415CQ04033 374 aaPredicted RBP3.21□□□□□ -1.9
RRP42YDL111C MDY2Q12285 212 aa3.21□□□□□ -1.9
RRP42YDL111C ARG4P04076 463 aaPredicted RBP3.2□□□□□ -1.9
RRP42YDL111C DST1P07273 309 aa3.2□□□□□ -1.9
RRP42YDL111C YFL068WP0CX99 160 aa3.2□□□□□ -1.9
RRP42YDL111C YLL066W-AP0CY00 160 aa3.2□□□□□ -1.9
RRP42YDL111C YLL067W-AP0CY01 160 aa3.2□□□□□ -1.9
RRP42YDL111C PRP16P15938 1071 aaPredicted RBP3.2□□□□□ -1.9
RRP42YDL111C LSB5P25369 354 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms