RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C PCH2P38126 564 aa3.78□□□□□ -1.8
PRP11YDL043C ERV46P39727 415 aa3.78□□□□□ -1.8
PRP11YDL043C GDI1P39958 451 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C GIM4P40005 111 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C SHQ1P40486 507 aaPredicted RBP3.78□□□□□ -1.8
PRP11YDL043C YIL001WP40560 513 aa3.78□□□□□ -1.8
PRP11YDL043C VMA13P41807 478 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C STB1P42845 420 aa3.78□□□□□ -1.8
PRP11YDL043C STB2P46679 850 aa3.78□□□□□ -1.8
PRP11YDL043C SSU72P53538 206 aaPredicted RBP3.78□□□□□ -1.8
PRP11YDL043C EOS1P53938 366 aa3.78□□□□□ -1.8
PRP11YDL043C TOF2Q02208 771 aa3.78□□□□□ -1.8
PRP11YDL043C MSC1Q03104 513 aa3.78□□□□□ -1.8
PRP11YDL043C EMI2Q04409 500 aaKnown RBP3.78□□□□□ -1.8
PRP11YDL043C SOV1Q04748 898 aa3.78□□□□□ -1.8
PRP11YDL043C BCP1Q06338 283 aa3.78□□□□□ -1.8
PRP11YDL043C VAC14Q06708 880 aa3.78□□□□□ -1.8
PRP11YDL043C YPR091CQ06833 770 aa3.78□□□□□ -1.8
PRP11YDL043C RSA1Q08932 381 aa3.78□□□□□ -1.8
PRP11YDL043C YLR049CQ12110 428 aa3.78□□□□□ -1.8
PRP11YDL043C MSH5Q12175 901 aa3.78□□□□□ -1.8
PRP11YDL043C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
PRP11YDL043C RBD2Q12270 262 aa3.78□□□□□ -1.8
PRP11YDL043C YDL007C-AQ2V2Q0 85 aa3.78□□□□□ -1.8
PRP11YDL043C RPO31P04051 1460 aa3.78□□□□□ -1.8
PRP11YDL043C SPP41P38904 1435 aa3.78□□□□□ -1.8
PRP11YDL043C MHP1P43638 1398 aa3.77□□□□□ -1.81
PRP11YDL043C TDH1P00360 332 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C RAD7P06779 565 aa3.77□□□□□ -1.81
PRP11YDL043C GCD2P12754 651 aaPredicted RBP3.77□□□□□ -1.81
PRP11YDL043C RPL3P14126 387 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C YAK1P14680 807 aa3.77□□□□□ -1.81
PRP11YDL043C SEC63P14906 663 aa3.77□□□□□ -1.81
PRP11YDL043C RPI1P23250 407 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C TKL1P23254 680 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C BUD5P25300 642 aaPredicted RBP3.77□□□□□ -1.81
PRP11YDL043C ELO2P25358 347 aa3.77□□□□□ -1.81
PRP11YDL043C HXT3P32466 567 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C RAD5P32849 1169 aaPredicted RBP3.77□□□□□ -1.81
PRP11YDL043C IMD2P38697 523 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C DBP8P38719 431 aa3.77□□□□□ -1.81
PRP11YDL043C LSM12P38828 187 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C PRM9P39551 298 aa3.77□□□□□ -1.81
PRP11YDL043C PAC2P39937 518 aa3.77□□□□□ -1.81
PRP11YDL043C LCB2P40970 561 aa3.77□□□□□ -1.81
PRP11YDL043C MSS2P40990 351 aa3.77□□□□□ -1.81
PRP11YDL043C YJR141WP47172 347 aaPredicted RBP3.77□□□□□ -1.81
PRP11YDL043C IMD3P50095 523 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C PIB2P53191 635 aa3.77□□□□□ -1.81
PRP11YDL043C OKP1P53298 406 aa3.77□□□□□ -1.81
PRP11YDL043C SLI1P53304 468 aa3.77□□□□□ -1.81
PRP11YDL043C YKR005CQ02203 525 aa3.77□□□□□ -1.81
PRP11YDL043C RLI1Q03195 608 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C SNX41Q04053 625 aa3.77□□□□□ -1.81
PRP11YDL043C PDS5Q04264 1277 aa3.77□□□□□ -1.81
PRP11YDL043C FAR8Q05040 523 aa3.77□□□□□ -1.81
PRP11YDL043C ECM7Q06200 448 aa3.77□□□□□ -1.81
PRP11YDL043C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
PRP11YDL043C YEH2Q07950 538 aa3.77□□□□□ -1.81
PRP11YDL043C RRT8Q08219 342 aa3.77□□□□□ -1.81
PRP11YDL043C RPN8Q08723 338 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C SRO7Q12038 1033 aa3.77□□□□□ -1.81
PRP11YDL043C VPS54Q12071 889 aa3.77□□□□□ -1.81
PRP11YDL043C RPN5Q12250 445 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C MDY2Q12285 212 aa3.77□□□□□ -1.81
PRP11YDL043C RDL1Q12305 139 aaKnown RBP3.77□□□□□ -1.81
PRP11YDL043C NCB2Q92317 146 aa3.77□□□□□ -1.81
PRP11YDL043C XRN1P22147 1528 aaKnown RBP3.76□□□□□ -1.81
PRP11YDL043C YPR089WO13585 888 aa3.76□□□□□ -1.81
PRP11YDL043C MATALPHA2P0CY08 210 aa3.76□□□□□ -1.81
PRP11YDL043C HMLALPHA2P0CY09 210 aa3.76□□□□□ -1.81
PRP11YDL043C ALG1P16661 449 aa3.76□□□□□ -1.81
PRP11YDL043C RRP7P25368 297 aaPredicted RBP3.76□□□□□ -1.81
PRP11YDL043C ICL1P28240 557 aaPredicted RBP3.76□□□□□ -1.81
PRP11YDL043C SEC1P30619 724 aaKnown RBP3.76□□□□□ -1.81
PRP11YDL043C MSS51P32335 436 aa3.76□□□□□ -1.81
PRP11YDL043C ERG1P32476 496 aaKnown RBP3.76□□□□□ -1.81
PRP11YDL043C RML2P32611 393 aa3.76□□□□□ -1.81
PRP11YDL043C GYP6P32806 458 aa3.76□□□□□ -1.81
PRP11YDL043C SUR1P33300 382 aa3.76□□□□□ -1.81
PRP11YDL043C RPL32P38061 130 aaKnown RBP3.76□□□□□ -1.81
PRP11YDL043C CHK1P38147 527 aa3.76□□□□□ -1.81
PRP11YDL043C MMS4P38257 691 aa3.76□□□□□ -1.81
PRP11YDL043C NTC20P38302 140 aaPredicted RBP3.76□□□□□ -1.81
PRP11YDL043C YER184CP39961 794 aa3.76□□□□□ -1.81
PRP11YDL043C SNL1P40548 159 aa3.76□□□□□ -1.81
PRP11YDL043C CIN1P40987 1014 aa3.76□□□□□ -1.81
PRP11YDL043C CAK1P43568 368 aaPredicted RBP3.76□□□□□ -1.81
PRP11YDL043C GTO1P48239 356 aa3.76□□□□□ -1.81
PRP11YDL043C ORC5P50874 479 aa3.76□□□□□ -1.81
PRP11YDL043C YGR042WP53227 271 aa3.76□□□□□ -1.81
PRP11YDL043C SAM50P53969 484 aa3.76□□□□□ -1.81
PRP11YDL043C APM1Q00776 475 aaPredicted RBP3.76□□□□□ -1.81
PRP11YDL043C RPL6AQ02326 176 aaKnown RBP3.76□□□□□ -1.81
PRP11YDL043C ECM18Q04623 453 aa3.76□□□□□ -1.81
PRP11YDL043C GTO3Q04806 366 aa3.76□□□□□ -1.81
PRP11YDL043C HCR1Q05775 265 aaKnown RBP3.76□□□□□ -1.81
PRP11YDL043C DXO1Q06349 442 aa3.76□□□□□ -1.81
PRP11YDL043C VPS74Q06385 345 aa3.76□□□□□ -1.81
PRP11YDL043C IRC10Q08118 586 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms