RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	ANS1	P38832	159 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	SPC97	P38863	823 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	LSM5	P40089	93 aa	Known RBP	4.23	□□□□□ -1.73
SHE1	YBL031W	YIL001W	P40560	513 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	AXL1	P40851	1208 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SHE1	YBL031W	YML6	P51998	286 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	RCF2	P53721	224 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	ADA2	Q02336	434 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	SPO19	Q03029	223 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	YDR239C	Q03780	787 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	ECM22	Q05958	814 aa	Predicted RBP	4.23	□□□□□ -1.73
SHE1	YBL031W	POS5	Q06892	414 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	YDL057W	Q07379	328 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	FLO1	P32768	1537 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	ARG4	P04076	463 aa	Predicted RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	MRP13	P12686	339 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	RPL5	P26321	297 aa	Known RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	MSG5	P38590	489 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	MSR1	P38714	643 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	LIN1	P38852	340 aa	Predicted RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	PHO90	P39535	881 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	RPS10B	P46784	105 aa	Known RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	PHO86	P46956	311 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	NET1	P47035	1189 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	BNA3	P47039	444 aa	Known RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	LIA1	P47120	325 aa	Known RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	BRO1	P48582	844 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	PYK2	P52489	506 aa	Known RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	SGF73	P53165	657 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	YGR126W	P53274	230 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	KTR5	P53966	522 aa	Predicted RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	RSM23	Q01163	450 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	MSC1	Q03104	513 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	PRP3	Q03338	469 aa	Predicted RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	PRM6	Q04705	352 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	ECM7	Q06200	448 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	ABP140	Q08641	628 aa	Known RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	RPS10A	Q08745	105 aa	Predicted RBP	4.22	□□□□□ -1.73
SHE1	YBL031W	FLO11	P08640	1367 aa		4.22	□□□□□ -1.73
SHE1	YBL031W	GPA2	P10823	449 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	PDX1	P16451	410 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	SEC14	P24280	304 aa	Known RBP	4.21	□□□□□ -1.74
SHE1	YBL031W	SIN4	P32259	974 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	COY1	P34237	679 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	HEL1	P36113	551 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	ARP1	P38696	384 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	KEL1	P38853	1164 aa	Known RBP	4.21	□□□□□ -1.74
SHE1	YBL031W	VRG4	P40107	337 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	XBP1	P40489	647 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	HXT14	P42833	540 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	ALK1	P43633	760 aa	Known RBP	4.21	□□□□□ -1.74
SHE1	YBL031W	STB2	P46679	850 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	HSH155	P49955	971 aa	Known RBP	4.21	□□□□□ -1.74
SHE1	YBL031W	MIG2	P53035	382 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	RTT102	P53330	157 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	YMR155W	Q03795	547 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SHE1	YBL031W	GPM3	Q12326	303 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	YDL007C-A	Q2V2Q0	85 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	AI5_BETA	Q9ZZX0	354 aa		4.21	□□□□□ -1.74
SHE1	YBL031W	GCD2	P12754	651 aa	Predicted RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	VMA2	P16140	517 aa	Known RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	EXO70	P19658	623 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	VPH2	P32341	215 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	TMT1	P32643	299 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	MTR2	P34232	184 aa	Known RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	PEX5	P35056	612 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	SCO2	P38072	301 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	MMS4	P38257	691 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	SWC5	P38326	303 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	FRT2	P39734	528 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	SNZ3	P43545	298 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	CPR7	P47103	393 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	VMA10	P48836	114 aa	Known RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	SNZ2	P53824	298 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	YNL181W	P53878	407 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	TRM44	Q02648	567 aa	Known RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	DIG1	Q03063	452 aa	Known RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	YMR160W	Q03823	816 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	KAP95	Q06142	861 aa	Known RBP	4.2	□□□□□ -1.74
SHE1	YBL031W	YDL218W	Q07629	317 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	IES4	Q08561	116 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	ATX2	Q12067	313 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	YDR018C	Q12185	396 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	CSR2	Q12734	1121 aa		4.2	□□□□□ -1.74
SHE1	YBL031W	CBP1	P07252	654 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	PUT4	P15380	627 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	HPR1	P17629	752 aa	Known RBP	4.19	□□□□□ -1.74
SHE1	YBL031W	REC107	P21651	314 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	SLY1	P22213	666 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	TRX1	P22217	103 aa	Known RBP	4.19	□□□□□ -1.74
SHE1	YBL031W	DAL2	P25335	343 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	RPC19	P28000	142 aa	Known RBP	4.19	□□□□□ -1.74
SHE1	YBL031W	MRX3	P38172	270 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	LEU5	P38702	357 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	LAG1	P38703	411 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	JEM1	P40358	645 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	YIL060W	P40519	144 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms