RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 COX4P04037 155 aa1.97□□□□□ -2.09
snR56snR56 MAS2P11914 482 aa1.97□□□□□ -2.09
snR56snR56 IES6P32617 166 aa1.97□□□□□ -2.09
snR56snR56 RTC2P38279 296 aa1.97□□□□□ -2.09
snR56snR56 PGU1P47180 361 aa1.97□□□□□ -2.09
snR56snR56 YGR021WP53212 290 aa1.97□□□□□ -2.09
snR56snR56 NDE2Q07500 545 aa1.97□□□□□ -2.09
snR56snR56 CTI6Q08923 506 aa1.97□□□□□ -2.09
snR56snR56 RAX2Q12465 1220 aa1.97□□□□□ -2.09
snR56snR56 SNT1P25357 1226 aa1.96□□□□□ -2.1
snR56snR56 RML2P32611 393 aa1.96□□□□□ -2.1
snR56snR56 TOM20P35180 183 aa1.96□□□□□ -2.1
snR56snR56 TCD2P36101 447 aaKnown RBP1.96□□□□□ -2.1
snR56snR56 OCA1P50946 238 aaPredicted RBP1.96□□□□□ -2.1
snR56snR56 VID30P53076 958 aa1.96□□□□□ -2.1
snR56snR56 ADA2Q02336 434 aa1.96□□□□□ -2.1
snR56snR56 RLM1Q12224 676 aa1.96□□□□□ -2.1
snR56snR56 DPH1P40487 425 aaKnown RBP1.95□□□□□ -2.1
snR56snR56 CAF130P53280 1122 aaPredicted RBP1.95□□□□□ -2.1
snR56snR56 FIN1Q03898 291 aa1.95□□□□□ -2.1
snR56snR56 LIP2Q06005 328 aa1.95□□□□□ -2.1
snR56snR56 YEH1Q07804 573 aa1.95□□□□□ -2.1
snR56snR56 YRM1Q12340 786 aa1.95□□□□□ -2.1
snR56snR56 YPT6Q99260 215 aa1.95□□□□□ -2.1
snR56snR56 AAT2P23542 418 aaKnown RBP1.94□□□□□ -2.1
snR56snR56 HIR2P32480 875 aa1.94□□□□□ -2.1
snR56snR56 DLD2P46681 530 aaKnown RBP1.94□□□□□ -2.1
snR56snR56 MDE1P47095 244 aa1.94□□□□□ -2.1
snR56snR56 YNR048WP53740 393 aa1.94□□□□□ -2.1
snR56snR56 JID1Q12350 301 aa1.94□□□□□ -2.1
snR56snR56 PRD1P25375 712 aa1.93□□□□□ -2.1
snR56snR56 PEP3P27801 918 aa1.93□□□□□ -2.1
snR56snR56 DPH2P32461 534 aa1.93□□□□□ -2.1
snR56snR56 YBL029WP38201 376 aa1.93□□□□□ -2.1
snR56snR56 ARE2P53629 642 aaKnown RBP1.93□□□□□ -2.1
snR56snR56 PIN3Q06449 215 aa1.93□□□□□ -2.1
snR56snR56 TOP1P04786 769 aa1.92□□□□□ -2.1
snR56snR56 CHS3P29465 1165 aa1.92□□□□□ -2.1
snR56snR56 PTH2P34222 208 aa1.92□□□□□ -2.1
snR56snR56 YPS5P53057 165 aa1.92□□□□□ -2.1
snR56snR56 SAL1D6W196 494 aa1.91□□□□□ -2.1
snR56snR56 RRN3P36070 627 aa1.91□□□□□ -2.1
snR56snR56 BAT1P38891 393 aaKnown RBP1.91□□□□□ -2.1
snR56snR56 ALD5P40047 520 aaKnown RBP1.91□□□□□ -2.1
snR56snR56 NCS2P53923 493 aaPredicted RBP1.91□□□□□ -2.1
snR56snR56 TEF1P02994 458 aaKnown RBP1.9□□□□□ -2.11
snR56snR56 NAM2P11325 894 aa1.9□□□□□ -2.11
snR56snR56 SPO7P18410 259 aa1.9□□□□□ -2.11
snR56snR56 ECM25P32525 599 aa1.9□□□□□ -2.11
snR56snR56 FRE4P53746 719 aa1.9□□□□□ -2.11
snR56snR56 NGL3Q03210 505 aa1.9□□□□□ -2.11
snR56snR56 RTP1Q12751 981 aa1.9□□□□□ -2.11
snR56snR56 RPL31BP0C2H9 113 aaKnown RBP1.89□□□□□ -2.11
snR56snR56 OXA1P39952 402 aa1.89□□□□□ -2.11
snR56snR56 SGN1P40561 250 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
snR56snR56 TPS1Q00764 495 aaKnown RBP1.89□□□□□ -2.11
snR56snR56 NOP58Q12499 511 aaKnown RBP1.89□□□□□ -2.11
snR56snR56 ATP10P18496 279 aa1.88□□□□□ -2.11
snR56snR56 TPS2P31688 896 aaKnown RBP1.88□□□□□ -2.11
snR56snR56 WBP1P33767 430 aaKnown RBP1.88□□□□□ -2.11
snR56snR56 THI2P38141 450 aa1.88□□□□□ -2.11
snR56snR56 OM14P38325 134 aa1.88□□□□□ -2.11
snR56snR56 UPF3P48412 387 aaKnown RBP1.88□□□□□ -2.11
snR56snR56 MTQ1P53944 314 aa1.88□□□□□ -2.11
snR56snR56 YBR126W-AQ8TGU7 68 aa1.88□□□□□ -2.11
snR56snR56 ARG4P04076 463 aaPredicted RBP1.87□□□□□ -2.11
snR56snR56 RPI1P23250 407 aaKnown RBP1.87□□□□□ -2.11
snR56snR56 PRR1P28708 518 aa1.87□□□□□ -2.11
snR56snR56 PRY2P36110 329 aa1.87□□□□□ -2.11
snR56snR56 JLP2P40206 208 aa1.87□□□□□ -2.11
snR56snR56 ECM27P47144 725 aa1.87□□□□□ -2.11
snR56snR56 YGL108CP53139 140 aa1.87□□□□□ -2.11
snR56snR56 SLF1Q12034 447 aaKnown RBP1.87□□□□□ -2.11
snR56snR56 YDL007C-AQ2V2Q0 85 aa1.87□□□□□ -2.11
snR56snR56 OLE1P21147 510 aaKnown RBP1.86□□□□□ -2.11
snR56snR56 GYP6P32806 458 aa1.86□□□□□ -2.11
snR56snR56 PTK1P36002 662 aaPredicted RBP1.86□□□□□ -2.11
snR56snR56 SEC9P40357 651 aa1.86□□□□□ -2.11
snR56snR56 BIR1P47134 954 aa1.86□□□□□ -2.11
snR56snR56 YPL107WQ02873 248 aa1.86□□□□□ -2.11
snR56snR56 YDR387CQ04162 555 aa1.86□□□□□ -2.11
snR56snR56 YET2Q04210 160 aa1.86□□□□□ -2.11
snR56snR56 YPR195CQ06594 109 aa1.86□□□□□ -2.11
snR56snR56 YME2P32843 850 aa1.85□□□□□ -2.11
snR56snR56 GPI18P38211 433 aa1.85□□□□□ -2.11
snR56snR56 CCT2P39076 527 aaKnown RBP1.85□□□□□ -2.11
snR56snR56 YFL012WP43580 148 aa1.85□□□□□ -2.11
snR56snR56 DSL1P53847 754 aa1.85□□□□□ -2.11
snR56snR56 RHO5P53879 331 aaKnown RBP1.85□□□□□ -2.11
snR56snR56 NUP116Q02630 1113 aa1.85□□□□□ -2.11
snR56snR56 SMF3Q12078 473 aaPredicted RBP1.85□□□□□ -2.11
snR56snR56 NMD4Q12129 218 aa1.85□□□□□ -2.11
snR56snR56 AVL9Q12500 764 aa1.85□□□□□ -2.11
snR56snR56 RPB5P20434 215 aa1.84□□□□□ -2.11
snR56snR56 LYS1P38998 373 aaRIP-Chip data1.84□□□□□ -2.11not detected
snR56snR56 YFR057WP43625 151 aa1.84□□□□□ -2.11
snR56snR56 AZR1P50080 613 aa1.84□□□□□ -2.11
snR56snR56 YGL262WP53054 175 aa1.84□□□□□ -2.11
snR56snR56 YIP5P53108 310 aa1.84□□□□□ -2.11
snR56snR56 KTR5P53966 522 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms