RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	TRS85	P46944	698 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	IBD2	P53892	351 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	SCW10	Q04951	389 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	DON1	Q05610	365 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	CBS2	P14905	389 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	PDX1	P16451	410 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	KRE2	P27809	442 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	PIM1	P36775	1133 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	NAT2	P37293	288 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	YFL067W	P43537	175 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	RPS0B	P46654	252 aa	Known RBP	2.18	□□□□□ -2.06
NUP82	YJL061W	ART5	P53244	586 aa	Known RBP	2.18	□□□□□ -2.06
NUP82	YJL061W	YGR250C	P53316	781 aa	Known RBP	2.18	□□□□□ -2.06
NUP82	YJL061W	BOR1	P53838	576 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	YIF1	P53845	314 aa	Known RBP	2.18	□□□□□ -2.06
NUP82	YJL061W	SKO1	Q02100	647 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	ARX1	Q03862	593 aa	Known RBP	2.18	□□□□□ -2.06
NUP82	YJL061W	YLL056C	Q12177	298 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	VAM3	Q12241	283 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	YCL021W-A	Q96VH3	125 aa		2.18	□□□□□ -2.06
NUP82	YJL061W	HEM15	P16622	393 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	RPC53	P25441	422 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	SIN4	P32259	974 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	PCA1	P38360	1216 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	SAS2	P40963	338 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	YJR011C	P47086	261 aa	Predicted RBP	2.17	□□□□□ -2.06
NUP82	YJL061W	KTR5	P53966	522 aa	Predicted RBP	2.17	□□□□□ -2.06
NUP82	YJL061W	RRN11	Q04712	507 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	ROY1	Q04847	553 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	REX4	Q08237	289 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	SGT1	Q08446	395 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	AFI1	Q99222	893 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	SAM1	P10659	382 aa	Known RBP	2.17	□□□□□ -2.06
NUP82	YJL061W	SAM2	P19358	384 aa	Known RBP	2.17	□□□□□ -2.06
NUP82	YJL061W	SNT1	P25357	1226 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	ADK2	P26364	225 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	BEM1	P29366	551 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	DBF4	P32325	704 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	TFB1	P32776	642 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	STB6	P36085	766 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	MMS4	P38257	691 aa		2.17	□□□□□ -2.06
NUP82	YJL061W	PKH2	Q12236	1081 aa	Known RBP	2.17	□□□□□ -2.06
NUP82	YJL061W	ARG4	P04076	463 aa	Predicted RBP	2.16	□□□□□ -2.06
NUP82	YJL061W	SEC63	P14906	663 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	RHB1	P25378	209 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	SPS22	P25380	463 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	TIP1	P27654	210 aa	Predicted RBP	2.16	□□□□□ -2.06
NUP82	YJL061W	HIR2	P32480	875 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	MPE1	P35728	441 aa	Known RBP	2.16	□□□□□ -2.06
NUP82	YJL061W	LYS1	P38998	373 aa	RIP-Chip data	2.16	□□□□□ -2.06	not detected
NUP82	YJL061W	MST28	P39552	234 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	LAM5	P43560	674 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	BNI5	P53890	448 aa	Known RBP	2.16	□□□□□ -2.06
NUP82	YJL061W	RMT2	Q03305	412 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	ESA1	Q08649	445 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	TIM18	Q08749	192 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	THP3	Q12049	470 aa	Known RBP	2.16	□□□□□ -2.06
NUP82	YJL061W	MED2	Q12124	431 aa		2.16	□□□□□ -2.06
NUP82	YJL061W	RRP12	Q12754	1228 aa	Known RBP	2.16	□□□□□ -2.06
NUP82	YJL061W	MIX23	P38162	196 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	AVT5	P38176	459 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	RFC3	P38629	340 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	YPI1	P43587	155 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	YGL242C	P53066	181 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	YDR131C	Q03899	556 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	ERB1	Q04660	807 aa	Known RBP	2.15	□□□□□ -2.06
NUP82	YJL061W	TLG2	Q08144	397 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	RKM1	Q08961	583 aa	Predicted RBP	2.15	□□□□□ -2.06
NUP82	YJL061W	YPR022C	Q12139	1133 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	YLR108C	Q12259	485 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	ISA2	Q12425	185 aa		2.15	□□□□□ -2.06
NUP82	YJL061W	HHF1	P02309	103 aa	Known RBP	2.15	□□□□□ -2.07
NUP82	YJL061W	SCEI	P03882	235 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	CHS1	P08004	1131 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	URA4	P20051	364 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	CLB1	P24868	471 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	BRF1	P29056	596 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	YBL059W	P34224	193 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	RIB5	P38145	238 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	CAK1	P43568	368 aa	Predicted RBP	2.15	□□□□□ -2.07
NUP82	YJL061W	HMS2	P47175	358 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	YNR048W	P53740	393 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	FRE4	P53746	719 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	GOR1	P53839	350 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	HOT1	Q03213	719 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	YMR130W	Q04223	302 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	MDM30	Q05930	598 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	YER078W-A	Q3E7A2	54 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	ISN1	Q99312	450 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	RAD61	Q99359	647 aa		2.15	□□□□□ -2.07
NUP82	YJL061W	SPT15	P13393	240 aa	Known RBP	2.14	□□□□□ -2.07
NUP82	YJL061W	LSB5	P25369	354 aa		2.14	□□□□□ -2.07
NUP82	YJL061W	URA7	P28274	579 aa	Known RBP	2.14	□□□□□ -2.07
NUP82	YJL061W	DEG1	P31115	442 aa	Known RBP	2.14	□□□□□ -2.07
NUP82	YJL061W	SDH3	P33421	198 aa		2.14	□□□□□ -2.07
NUP82	YJL061W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.14	□□□□□ -2.07	not detected
NUP82	YJL061W	YIL067C	P40514	678 aa		2.14	□□□□□ -2.07
NUP82	YJL061W	OST1	P41543	476 aa	Known RBP	2.14	□□□□□ -2.07
NUP82	YJL061W	YMR181C	Q03231	154 aa		2.14	□□□□□ -2.07
NUP82	YJL061W	TAF12	Q03761	539 aa		2.14	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms