RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	NIP100	P33420	868 aa		2.77	□□□□□ -1.97
VMA21	YGR105W	MTC6	P38849	526 aa		2.77	□□□□□ -1.97
VMA21	YGR105W	CCT2	P39076	527 aa	Known RBP	2.77	□□□□□ -1.97
VMA21	YGR105W	DSL1	P53847	754 aa		2.77	□□□□□ -1.97
VMA21	YGR105W	HXT11	P54862	567 aa		2.77	□□□□□ -1.97
VMA21	YGR105W	HRI1	Q05905	244 aa	Known RBP	2.77	□□□□□ -1.97
VMA21	YGR105W	RBD2	Q12270	262 aa		2.77	□□□□□ -1.97
VMA21	YGR105W	RAD61	Q99359	647 aa		2.77	□□□□□ -1.97
VMA21	YGR105W	YLR278C	Q05854	1341 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	SUP35	P05453	685 aa	Known RBP	2.76	□□□□□ -1.97
VMA21	YGR105W	MET17	P06106	444 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	PET123	P17558	318 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	SPS22	P25380	463 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	PRP21	P32524	280 aa	Predicted RBP	2.76	□□□□□ -1.97
VMA21	YGR105W	ECM25	P32525	599 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	GYP6	P32806	458 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	REC114	P32841	428 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	ARF3	P40994	183 aa	RIP-Chip data	2.76	□□□□□ -1.97	not detected
VMA21	YGR105W	YIF1	P53845	314 aa	Known RBP	2.76	□□□□□ -1.97
VMA21	YGR105W	HSP31	Q04432	237 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	RQC1	Q05468	723 aa	Known RBP	2.76	□□□□□ -1.97
VMA21	YGR105W	TIM18	Q08749	192 aa		2.76	□□□□□ -1.97
VMA21	YGR105W	PKH2	Q12236	1081 aa	Known RBP	2.76	□□□□□ -1.97
VMA21	YGR105W	SPS4	P09937	338 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	RPS8A	P0CX39	200 aa	Known RBP	2.75	□□□□□ -1.97
VMA21	YGR105W	RPS8B	P0CX40	200 aa	Known RBP	2.75	□□□□□ -1.97
VMA21	YGR105W	APE2	P32454	952 aa	Known RBP	2.75	□□□□□ -1.97
VMA21	YGR105W	YBR137W	P38276	179 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	SMF1	P38925	575 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	PAN6	P40459	309 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	YLR152C	P54072	576 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	RRI2	Q12348	645 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	GRX6	Q12438	231 aa		2.75	□□□□□ -1.97
VMA21	YGR105W	RPL3	P14126	387 aa	Known RBP	2.74	□□□□□ -1.97
VMA21	YGR105W	SLY1	P22213	666 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	RPI1	P23250	407 aa	Known RBP	2.74	□□□□□ -1.97
VMA21	YGR105W	DAL2	P25335	343 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	RVS161	P25343	265 aa	Known RBP	2.74	□□□□□ -1.97
VMA21	YGR105W	HXT3	P32466	567 aa	Known RBP	2.74	□□□□□ -1.97
VMA21	YGR105W	SPR1	P32603	445 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	VTC2	P43585	828 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	ECM27	P47144	725 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	SSN8	P47821	323 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	YGL039W	P53183	348 aa	Known RBP	2.74	□□□□□ -1.97
VMA21	YGR105W	FRE4	P53746	719 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	PPM1	Q04081	328 aa		2.74	□□□□□ -1.97
VMA21	YGR105W	BUD21	Q08492	214 aa	Predicted RBP	2.74	□□□□□ -1.97
VMA21	YGR105W	MRP7	P12687	371 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	CKA1	P15790	372 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	VHC1	P38329	1120 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	MSG5	P38590	489 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	SAS2	P40963	338 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	MTM1	P53320	366 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	HER2	Q03557	464 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	GIR2	Q03768	265 aa	Predicted RBP	2.73	□□□□□ -1.97
VMA21	YGR105W	SYF1	Q04048	859 aa	Predicted RBP	2.73	□□□□□ -1.97
VMA21	YGR105W	SIL1	Q08199	421 aa		2.73	□□□□□ -1.97
VMA21	YGR105W	SOD1	P00445	154 aa	Known RBP	2.72	□□□□□ -1.97
VMA21	YGR105W	TRP1	P00912	224 aa		2.72	□□□□□ -1.97
VMA21	YGR105W	GPH1	P06738	902 aa	Known RBP	2.72	□□□□□ -1.97
VMA21	YGR105W	RIP1	P08067	215 aa		2.72	□□□□□ -1.97
VMA21	YGR105W	ROX1	P25042	368 aa		2.72	□□□□□ -1.97
VMA21	YGR105W	MNS1	P32906	549 aa		2.72	□□□□□ -1.97
VMA21	YGR105W	LYS1	P38998	373 aa	RIP-Chip data	2.72	□□□□□ -1.97	not detected
VMA21	YGR105W	ESL1	P40456	1118 aa		2.72	□□□□□ -1.97
VMA21	YGR105W	IRC6	P43615	237 aa		2.72	□□□□□ -1.97
VMA21	YGR105W	SNX3	Q08826	162 aa	Known RBP	2.72	□□□□□ -1.97
VMA21	YGR105W	HIS4	P00815	799 aa	Known RBP	2.71	□□□□□ -1.98
VMA21	YGR105W	TEF1	P02994	458 aa	Known RBP	2.71	□□□□□ -1.98
VMA21	YGR105W	NFT1	P0CE68	1218 aa		2.71	□□□□□ -1.98
VMA21	YGR105W	SEC63	P14906	663 aa		2.71	□□□□□ -1.98
VMA21	YGR105W	UTP9	P38882	575 aa	Known RBP	2.71	□□□□□ -1.98
VMA21	YGR105W	YNR048W	P53740	393 aa		2.71	□□□□□ -1.98
VMA21	YGR105W	CWC25	P53854	179 aa	Known RBP	2.71	□□□□□ -1.98
VMA21	YGR105W	YMR181C	Q03231	154 aa		2.71	□□□□□ -1.98
VMA21	YGR105W	ORT1	Q12375	292 aa		2.71	□□□□□ -1.98
VMA21	YGR105W	TOP1	P04786	769 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	OTU2	P38747	307 aa	Known RBP	2.7	□□□□□ -1.98
VMA21	YGR105W	YHR054C	P38780	354 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	NDE1	P40215	560 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	HMS2	P47175	358 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	MNP1	P53163	194 aa	Predicted RBP	2.7	□□□□□ -1.98
VMA21	YGR105W	SHY1	P53266	389 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	MRPL19	P53875	158 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	RPA49	Q01080	415 aa	Predicted RBP	2.7	□□□□□ -1.98
VMA21	YGR105W	WTM1	Q12363	437 aa	Known RBP	2.7	□□□□□ -1.98
VMA21	YGR105W	YOL159C-A	Q3E769	90 aa		2.7	□□□□□ -1.98
VMA21	YGR105W	ARG4	P04076	463 aa	Predicted RBP	2.69	□□□□□ -1.98
VMA21	YGR105W	CYC3	P06182	269 aa		2.69	□□□□□ -1.98
VMA21	YGR105W	SSU1	P41930	458 aa		2.69	□□□□□ -1.98
VMA21	YGR105W	PEX25	Q02969	394 aa		2.69	□□□□□ -1.98
VMA21	YGR105W	YMR027W	Q04371	470 aa		2.69	□□□□□ -1.98
VMA21	YGR105W	VTA1	Q06263	330 aa		2.69	□□□□□ -1.98
VMA21	YGR105W	ILV5	P06168	395 aa	Known RBP	2.68	□□□□□ -1.98
VMA21	YGR105W	LSB5	P25369	354 aa		2.68	□□□□□ -1.98
VMA21	YGR105W	MUD1	P32605	298 aa	Known RBP	2.68	□□□□□ -1.98
VMA21	YGR105W	PRS1	P32895	427 aa	Known RBP	2.68	□□□□□ -1.98
VMA21	YGR105W	SAS3	P34218	831 aa		2.68	□□□□□ -1.98
VMA21	YGR105W	KKQ8	P36004	724 aa		2.68	□□□□□ -1.98
VMA21	YGR105W	UTH1	P36135	365 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 105.2 ms