RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W RGT1P32862 1170 aa4.86□□□□□ -1.63
CDC4YFL009W SDS22P36047 338 aa4.86□□□□□ -1.63
CDC4YFL009W MRPL3P36516 390 aa4.86□□□□□ -1.63
CDC4YFL009W BAP2P38084 609 aa4.86□□□□□ -1.63
CDC4YFL009W IPT1P38954 527 aa4.86□□□□□ -1.63
CDC4YFL009W BUD13P46947 266 aaPredicted RBP4.86□□□□□ -1.63
CDC4YFL009W PRP24P49960 444 aaKnown RBP4.86□□□□□ -1.63
CDC4YFL009W TPN1P53099 579 aa4.86□□□□□ -1.63
CDC4YFL009W FMP48P53233 369 aa4.86□□□□□ -1.63
CDC4YFL009W MRPS16Q02608 121 aa4.86□□□□□ -1.63
CDC4YFL009W RMI1Q02685 241 aa4.86□□□□□ -1.63
CDC4YFL009W SIZ1Q04195 904 aa4.86□□□□□ -1.63
CDC4YFL009W ATG38Q05789 226 aaKnown RBP4.86□□□□□ -1.63
CDC4YFL009W ECM38Q05902 660 aaPredicted RBP4.86□□□□□ -1.63
CDC4YFL009W YPR022CQ12139 1133 aa4.86□□□□□ -1.63
CDC4YFL009W YOR012WQ12351 137 aa4.86□□□□□ -1.63
CDC4YFL009W DCN1Q12395 269 aa4.86□□□□□ -1.63
CDC4YFL009W YOS9Q99220 542 aa4.86□□□□□ -1.63
CDC4YFL009W CDC9P04819 755 aa4.85□□□□□ -1.63
CDC4YFL009W TPK1P06244 397 aa4.85□□□□□ -1.63
CDC4YFL009W NSP1P14907 823 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W SED4P25365 1065 aa4.85□□□□□ -1.63
CDC4YFL009W VBA3P25594 458 aa4.85□□□□□ -1.63
CDC4YFL009W YSC83P32792 385 aa4.85□□□□□ -1.63
CDC4YFL009W ECM8P38246 354 aa4.85□□□□□ -1.63
CDC4YFL009W ATG12P38316 186 aa4.85□□□□□ -1.63
CDC4YFL009W BIG1P38813 335 aa4.85□□□□□ -1.63
CDC4YFL009W MLH1P38920 769 aa4.85□□□□□ -1.63
CDC4YFL009W BFR1P38934 470 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
CDC4YFL009W PES4P39684 611 aa4.85□□□□□ -1.63
CDC4YFL009W SER2P42941 309 aa4.85□□□□□ -1.63
CDC4YFL009W YJR120WP47157 116 aa4.85□□□□□ -1.63
CDC4YFL009W MNT2P53059 558 aa4.85□□□□□ -1.63
CDC4YFL009W HXT11P54862 567 aa4.85□□□□□ -1.63
CDC4YFL009W EFR3Q03653 782 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W TAF11Q04226 346 aa4.85□□□□□ -1.63
CDC4YFL009W RQC1Q05468 723 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W YLR283WQ05867 314 aa4.85□□□□□ -1.63
CDC4YFL009W CUR1Q06469 252 aa4.85□□□□□ -1.63
CDC4YFL009W YPR091CQ06833 770 aa4.85□□□□□ -1.63
CDC4YFL009W FMP40Q08968 688 aaPredicted RBP4.85□□□□□ -1.63
CDC4YFL009W SAM4Q08985 325 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W DGK1Q12382 290 aa4.85□□□□□ -1.63
CDC4YFL009W YBR085C-AO43137 85 aa4.85□□□□□ -1.63
CDC4YFL009W TDH1P00360 332 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W GCN4P03069 281 aa4.85□□□□□ -1.63
CDC4YFL009W GPH1P06738 902 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W ABF1P14164 731 aa4.85□□□□□ -1.63
CDC4YFL009W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
CDC4YFL009W SAT4P25333 603 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W COQ2P32378 372 aa4.85□□□□□ -1.63
CDC4YFL009W SPC29P33419 253 aa4.85□□□□□ -1.63
CDC4YFL009W HIS7P33734 552 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W JEN1P36035 616 aa4.85□□□□□ -1.63
CDC4YFL009W YKR075CP36155 307 aa4.85□□□□□ -1.63
CDC4YFL009W TOS1P38288 455 aa4.85□□□□□ -1.63
CDC4YFL009W ARN2P38724 620 aa4.85□□□□□ -1.63
CDC4YFL009W RTC3P38804 111 aaPredicted RBP4.85□□□□□ -1.63
CDC4YFL009W HRB1P38922 454 aaKnown RBP RIP-Chip data4.85□□□□□ -1.63not detected
CDC4YFL009W CKB2P38930 258 aa4.85□□□□□ -1.63
CDC4YFL009W RPE1P46969 238 aa4.85□□□□□ -1.63
CDC4YFL009W DIA3P52290 468 aa4.85□□□□□ -1.63
CDC4YFL009W SMA1Q02651 245 aa4.85□□□□□ -1.63
CDC4YFL009W CWC21Q03375 135 aaKnown RBP4.85□□□□□ -1.63
CDC4YFL009W NHP10Q03435 203 aa4.85□□□□□ -1.63
CDC4YFL009W YMR160WQ03823 816 aa4.85□□□□□ -1.63
CDC4YFL009W SKG3Q06315 1026 aa4.85□□□□□ -1.63
CDC4YFL009W SWA2Q06677 668 aa4.85□□□□□ -1.63
CDC4YFL009W ASR1Q06834 288 aa4.85□□□□□ -1.63
CDC4YFL009W GSH2Q08220 491 aa4.85□□□□□ -1.63
CDC4YFL009W YOL159CQ08300 171 aa4.85□□□□□ -1.63
CDC4YFL009W TRE2Q08693 809 aa4.85□□□□□ -1.63
CDC4YFL009W YMR030W-AQ3E760 96 aa4.85□□□□□ -1.63
CDC4YFL009W CAF20P12962 161 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W GUK1P15454 187 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W CDC42P19073 191 aa4.84□□□□□ -1.63
CDC4YFL009W APN1P22936 367 aa4.84□□□□□ -1.63
CDC4YFL009W URA10P30402 227 aa4.84□□□□□ -1.63
CDC4YFL009W NDI1P32340 513 aa4.84□□□□□ -1.63
CDC4YFL009W AAR2P32357 355 aaPredicted RBP4.84□□□□□ -1.63
CDC4YFL009W PGM1P33401 570 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W YKL100CP34248 587 aa4.84□□□□□ -1.63
CDC4YFL009W ABZ1P37254 787 aaPredicted RBP4.84□□□□□ -1.63
CDC4YFL009W POP7P38291 140 aa4.84□□□□□ -1.63
CDC4YFL009W TSL1P38427 1098 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W PCM1P38628 557 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W PTI1P39927 425 aaPredicted RBP4.84□□□□□ -1.63
CDC4YFL009W MIT1P40002 666 aa4.84□□□□□ -1.63
CDC4YFL009W RTS2P40962 232 aa4.84□□□□□ -1.63
CDC4YFL009W ASN2P49090 572 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W HSH155P49955 971 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W PUS2P53167 370 aa4.84□□□□□ -1.63
CDC4YFL009W POP6P53218 158 aa4.84□□□□□ -1.63
CDC4YFL009W SRP1Q02821 542 aaKnown RBP4.84□□□□□ -1.63
CDC4YFL009W YMR155WQ03795 547 aa4.84□□□□□ -1.63
CDC4YFL009W CRR1Q05790 422 aa4.84□□□□□ -1.63
CDC4YFL009W SPH1Q06160 661 aa4.84□□□□□ -1.63
CDC4YFL009W YPD1Q07688 167 aa4.84□□□□□ -1.63
CDC4YFL009W YOL159C-AQ3E769 90 aa4.84□□□□□ -1.63
CDC4YFL009W AI5_BETAQ9ZZX0 354 aa4.84□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms