RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	YDR387C	Q04162	555 aa		3.69	□□□□□ -1.82
RTG3	YBL103C	IMH1	Q06704	911 aa	Known RBP	3.69	□□□□□ -1.82
RTG3	YBL103C	PRS1	P32895	427 aa	Known RBP	3.68	□□□□□ -1.82
RTG3	YBL103C	SEC66	P33754	206 aa		3.68	□□□□□ -1.82
RTG3	YBL103C	MSG5	P38590	489 aa		3.68	□□□□□ -1.82
RTG3	YBL103C	CCT2	P39076	527 aa	Known RBP	3.68	□□□□□ -1.82
RTG3	YBL103C	TFG2	P41896	400 aa	Predicted RBP	3.68	□□□□□ -1.82
RTG3	YBL103C	SSN8	P47821	323 aa		3.68	□□□□□ -1.82
RTG3	YBL103C	RMD9	P53140	646 aa	Known RBP	3.68	□□□□□ -1.82
RTG3	YBL103C	SHY1	P53266	389 aa		3.68	□□□□□ -1.82
RTG3	YBL103C	DSL1	P53847	754 aa		3.68	□□□□□ -1.82
RTG3	YBL103C	HER2	Q03557	464 aa		3.68	□□□□□ -1.82
RTG3	YBL103C	PKH2	Q12236	1081 aa	Known RBP	3.68	□□□□□ -1.82
RTG3	YBL103C	NAT1	P12945	854 aa	Known RBP	3.67	□□□□□ -1.82
RTG3	YBL103C	MNS1	P32906	549 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	VID24	P38263	362 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	VMA13	P41807	478 aa	Known RBP	3.67	□□□□□ -1.82
RTG3	YBL103C	HXT14	P42833	540 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	PPM1	Q04081	328 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	TIM18	Q08749	192 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	WTM1	Q12363	437 aa	Known RBP	3.67	□□□□□ -1.82
RTG3	YBL103C	ARG3	P05150	338 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	GPI10	P30777	616 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	PRP21	P32524	280 aa	Predicted RBP	3.67	□□□□□ -1.82
RTG3	YBL103C	ECM25	P32525	599 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	GYP6	P32806	458 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	REC114	P32841	428 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	YMR027W	Q04371	470 aa		3.67	□□□□□ -1.82
RTG3	YBL103C	YLR278C	Q05854	1341 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	SLY1	P22213	666 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	APE2	P32454	952 aa	Known RBP	3.66	□□□□□ -1.82
RTG3	YBL103C	NIP100	P33420	868 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	YBR137W	P38276	179 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	MET18	P40469	1032 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	MTM1	P53320	366 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	FRE4	P53746	719 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	HSP31	Q04432	237 aa		3.66	□□□□□ -1.82
RTG3	YBL103C	TRP1	P00912	224 aa		3.65	□□□□□ -1.83
RTG3	YBL103C	IMP2'	P32351	346 aa		3.65	□□□□□ -1.83
RTG3	YBL103C	UTH1	P36135	365 aa		3.65	□□□□□ -1.83
RTG3	YBL103C	YIF1	P53845	314 aa	Known RBP	3.65	□□□□□ -1.83
RTG3	YBL103C	CWC25	P53854	179 aa	Known RBP	3.65	□□□□□ -1.83
RTG3	YBL103C	PEX25	Q02969	394 aa		3.65	□□□□□ -1.83
RTG3	YBL103C	RIM20	Q12033	661 aa		3.65	□□□□□ -1.83
RTG3	YBL103C	NFT1	P0CE68	1218 aa		3.64	□□□□□ -1.83
RTG3	YBL103C	RPI1	P23250	407 aa	Known RBP	3.64	□□□□□ -1.83
RTG3	YBL103C	PCL1	P24867	279 aa		3.64	□□□□□ -1.83
RTG3	YBL103C	ECM27	P47144	725 aa		3.64	□□□□□ -1.83
RTG3	YBL103C	SNX3	Q08826	162 aa	Known RBP	3.64	□□□□□ -1.83
RTG3	YBL103C	JJJ1	P53863	590 aa		3.63	□□□□□ -1.83
RTG3	YBL103C	YMR181C	Q03231	154 aa		3.63	□□□□□ -1.83
RTG3	YBL103C	FDH1	Q08911	376 aa		3.63	□□□□□ -1.83
RTG3	YBL103C	SPS4	P09937	338 aa		3.62	□□□□□ -1.83
RTG3	YBL103C	PPH22	P23595	377 aa		3.62	□□□□□ -1.83
RTG3	YBL103C	HAL1	Q01766	294 aa		3.62	□□□□□ -1.83
RTG3	YBL103C	RSN1	Q03516	953 aa		3.62	□□□□□ -1.83
RTG3	YBL103C	TEF1	P02994	458 aa	Known RBP	3.61	□□□□□ -1.83
RTG3	YBL103C	TOP1	P04786	769 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	MRPL10	P36520	322 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	YHR131C	P38835	850 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	VTC2	P43585	828 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	YNR048W	P53740	393 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	MDG1	P53885	366 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	TSA2	Q04120	196 aa		3.61	□□□□□ -1.83
RTG3	YBL103C	RQC1	Q05468	723 aa	Known RBP	3.61	□□□□□ -1.83
RTG3	YBL103C	HIS4	P00815	799 aa	Known RBP	3.6	□□□□□ -1.83
RTG3	YBL103C	LYS1	P38998	373 aa	RIP-Chip data	3.6	□□□□□ -1.83	not detected
RTG3	YBL103C	SAS2	P40963	338 aa		3.6	□□□□□ -1.83
RTG3	YBL103C	SYF1	Q04048	859 aa	Predicted RBP	3.6	□□□□□ -1.83
RTG3	YBL103C	CYC3	P06182	269 aa		3.6	□□□□□ -1.83
RTG3	YBL103C	VHC1	P38329	1120 aa		3.6	□□□□□ -1.83
RTG3	YBL103C	ARF3	P40994	183 aa	RIP-Chip data	3.6	□□□□□ -1.83	not detected
RTG3	YBL103C	SSU1	P41930	458 aa		3.6	□□□□□ -1.83
RTG3	YBL103C	GIR2	Q03768	265 aa	Predicted RBP	3.6	□□□□□ -1.83
RTG3	YBL103C	ARG4	P04076	463 aa	Predicted RBP	3.59	□□□□□ -1.84
RTG3	YBL103C	RIP1	P08067	215 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	RPL3	P14126	387 aa	Known RBP	3.59	□□□□□ -1.84
RTG3	YBL103C	SEC63	P14906	663 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	HXT3	P32466	567 aa	Known RBP	3.59	□□□□□ -1.84
RTG3	YBL103C	MUD1	P32605	298 aa	Known RBP	3.59	□□□□□ -1.84
RTG3	YBL103C	ESL1	P40456	1118 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	BRO1	P48582	844 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	MED1	Q12321	566 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	ORT1	Q12375	292 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	GRX6	Q12438	231 aa		3.59	□□□□□ -1.84
RTG3	YBL103C	MET17	P06106	444 aa		3.58	□□□□□ -1.84
RTG3	YBL103C	GPH1	P06738	902 aa	Known RBP	3.58	□□□□□ -1.84
RTG3	YBL103C	KKQ8	P36004	724 aa		3.58	□□□□□ -1.84
RTG3	YBL103C	YHR054C	P38780	354 aa		3.58	□□□□□ -1.84
RTG3	YBL103C	SIL1	Q08199	421 aa		3.58	□□□□□ -1.84
RTG3	YBL103C	YDL012C	Q12489	107 aa		3.58	□□□□□ -1.84
RTG3	YBL103C	POP5	P28005	173 aa		3.57	□□□□□ -1.84
RTG3	YBL103C	SMF1	P38925	575 aa		3.57	□□□□□ -1.84
RTG3	YBL103C	HMS2	P47175	358 aa		3.57	□□□□□ -1.84
RTG3	YBL103C	SNT1	P25357	1226 aa		3.56	□□□□□ -1.84
RTG3	YBL103C	RTP1	Q12751	981 aa		3.56	□□□□□ -1.84
RTG3	YBL103C	LSB5	P25369	354 aa		3.55	□□□□□ -1.84
RTG3	YBL103C	KAR9	P32526	644 aa		3.55	□□□□□ -1.84
RTG3	YBL103C	APJ1	P53940	528 aa		3.55	□□□□□ -1.84
RTG3	YBL103C	YDL121C	Q07541	149 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms