RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YNL144C	P53907	740 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	RIM13	Q03792	727 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	CAC2	Q04199	468 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	FAR8	Q05040	523 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	TEN1	Q07921	160 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	SIL1	Q08199	421 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	YOL159C	Q08300	171 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	ICT1	Q12385	394 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	FIG2	P25653	1609 aa		4.27	□□□□□ -1.73
SHE1	YBL031W	PUT2	P07275	575 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	PMR1	P13586	950 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	ICL1	P28240	557 aa	Predicted RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	RME1	P32338	300 aa	Known RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	ZUO1	P32527	433 aa	Known RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	TOA1	P32773	286 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	STV1	P37296	890 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	MED8	P38304	223 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	RRT2	P38332	387 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	POP4	P38336	279 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	TIF4631	P39935	952 aa	Known RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	PSA1	P41940	361 aa	Known RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	IMD4	P50094	524 aa	Known RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	YGR111W	P53265	400 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	TIM8	P57744	87 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	YMR027W	Q04371	470 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	SFH1	Q06168	426 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	ATG26	Q06321	1198 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	MCP2	Q06567	569 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	GRC3	Q07845	632 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	YPL225W	Q08971	146 aa	Known RBP	4.26	□□□□□ -1.73
SHE1	YBL031W	ATG29	Q12092	213 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	CRC1	Q12289	327 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	GIS3	Q12418	502 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	SEC39	Q12745	709 aa		4.26	□□□□□ -1.73
SHE1	YBL031W	GAL80	P04387	435 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	YML002W	P0CF17	737 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	PDA1	P16387	420 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	SRV2	P17555	526 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	ART10	P18634	518 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	SAM2	P19358	384 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	YAP1	P19880	650 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	KGD1	P20967	1014 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	MRPS28	P21771	286 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	BUD14	P27637	709 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	WBP1	P33767	430 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	TIF3	P34167	436 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	TVP38	P36164	337 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	OTU2	P38747	307 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	END3	P39013	349 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	MAF1	P41910	395 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	PET130	P47065	347 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	URB2	P47108	1174 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	VPS25	P47142	202 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	HOS2	P53096	452 aa	Predicted RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	ARP10	Q04549	284 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	SPH1	Q06160	661 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	ECM30	Q06673	1274 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	FRE3	Q08905	711 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	SGT2	Q12118	346 aa	Known RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	RLM1	Q12224	676 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	RRP36	Q12481	300 aa	Predicted RBP	4.25	□□□□□ -1.73
SHE1	YBL031W	RIM15	P43565	1770 aa		4.25	□□□□□ -1.73
SHE1	YBL031W	DPH2	P32461	534 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	MUD1	P32605	298 aa	Known RBP	4.24	□□□□□ -1.73
SHE1	YBL031W	BUD2	P33314	1104 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	SEC66	P33754	206 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	CSG2	P35206	410 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	SWH1	P35845	1188 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	CMC1	P36064	111 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	PHO88	P38264	188 aa	Predicted RBP	4.24	□□□□□ -1.73
SHE1	YBL031W	VHC1	P38329	1120 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	PCA1	P38360	1216 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	YMR134W	P40207	237 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	YIL024C	P40543	189 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SHE1	YBL031W	LCB2	P40970	561 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	YNL320W	P42840	284 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	TWF1	P53250	332 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	DRN1	P53255	507 aa	Known RBP	4.24	□□□□□ -1.73
SHE1	YBL031W	YGR117C	P53270	476 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	IPI3	P53877	555 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	CTL1	Q03220	320 aa	Known RBP	4.24	□□□□□ -1.73
SHE1	YBL031W	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	RQC1	Q05468	723 aa	Known RBP	4.24	□□□□□ -1.73
SHE1	YBL031W	ADE13	Q05911	482 aa	Known RBP	4.24	□□□□□ -1.73
SHE1	YBL031W	THI7	Q05998	598 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	APC5	Q08683	685 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	ERP4	Q12450	207 aa		4.24	□□□□□ -1.73
SHE1	YBL031W	GAL4	P04386	881 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	RAD3	P06839	778 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	RPB8	P20436	146 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	CLB3	P24870	427 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	GPI10	P30777	616 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	SSE1	P32589	693 aa	Known RBP	4.23	□□□□□ -1.73
SHE1	YBL031W	SKG6	P32900	734 aa	Predicted RBP	4.23	□□□□□ -1.73
SHE1	YBL031W	KDX1	P36005	433 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	MCR1	P36060	302 aa	Known RBP	4.23	□□□□□ -1.73
SHE1	YBL031W	RPL32	P38061	130 aa	Known RBP	4.23	□□□□□ -1.73
SHE1	YBL031W	HSM3	P38348	480 aa		4.23	□□□□□ -1.73
SHE1	YBL031W	UBA4	P38820	440 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms