RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	CDA1	Q06702	301 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	SIL1	Q08199	421 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	FRE3	Q08905	711 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	YPL272C	Q08984	517 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	RLM1	Q12224	676 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	AHC1	Q12433	566 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	ECM3	Q99252	613 aa		3.59	□□□□□ -1.83
YAL004W	YAL004W	RIM15	P43565	1770 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	CDC8	P00572	216 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	ERG11	P10614	530 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	KIN2	P13186	1147 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	CLN1	P20437	546 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	VPS33	P20795	691 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	RNR1	P21524	888 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	MEI5	P32489	222 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	MGM101	P32787	269 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	OCT1	P35999	772 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	MCR1	P36060	302 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	RCK2	P38623	610 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	MMS21	P38632	267 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	YJL206C	P39529	758 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	YJL193W	P39542	402 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	VAB2	P40003	282 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	CTK3	P46963	296 aa	Predicted RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	NET1	P47035	1189 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	ECM27	P47144	725 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	COS12	P53053	380 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	KAP114	P53067	1004 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	ZPR1	P53303	486 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	DIP5	P53388	608 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	IPI3	P53877	555 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	INA17	Q02888	182 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	FIN1	Q03898	291 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	HMO1	Q03973	246 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	YDR179W-A	Q03983	463 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	RTN1	Q04947	295 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	RXT3	Q07458	294 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	MED2	Q12124	431 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	RIO1	Q12196	484 aa	Known RBP	3.58	□□□□□ -1.84
YAL004W	YAL004W	TAF3	Q12297	353 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	POM34	Q12445	299 aa		3.58	□□□□□ -1.84
YAL004W	YAL004W	MF(ALPHA)1	P01149	165 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	RPS3	P05750	240 aa	Known RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	ILV2	P07342	687 aa	Known RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	RSR1	P13856	272 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	PPH22	P23595	377 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	PEX1	P24004	1043 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	ADH7	P25377	361 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	IDH2	P28241	369 aa	Known RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	YKL070W	P36087	169 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	TVP38	P36164	337 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	GEX2	P36173	615 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	YBR259W	P38338	688 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	SIC1	P38634	284 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	YHR112C	P38716	378 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	MNL1	P38888	796 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	UTP18	P40362	594 aa	Predicted RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	AIM20	P40451	204 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	FKH2	P41813	862 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	LOC1	P43586	204 aa	Predicted RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	YHC3	P47040	408 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	RPS7B	P48164	190 aa	Known RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	MND1	P53102	219 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	YGL114W	P53134	725 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	ASI2	P53895	289 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	RNT1	Q02555	471 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	MSC2	Q03455	724 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	YMR130W	Q04223	302 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	YLR224W	Q05947	369 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	DIA2	Q08496	732 aa	Predicted RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	GPN2	Q08726	347 aa	Predicted RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	YPL216W	Q08964	1102 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	YOL107W	Q12239	342 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	MDM20	Q12387	796 aa	Known RBP	3.57	□□□□□ -1.84
YAL004W	YAL004W	GIS3	Q12418	502 aa		3.57	□□□□□ -1.84
YAL004W	YAL004W	FAS2	P19097	1887 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	ARG80	P07249	177 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	SPE1	P08432	466 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	SSA3	P09435	649 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	YML003W	P0CF16	290 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	SCH9	P11792	824 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	PEP5	P12868	1029 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	FUS3	P16892	353 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	VPS34	P22543	875 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	RPI1	P23250	407 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	ERG1	P32476	496 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	DSS4	P32601	143 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	UTR4	P32626	227 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	YME1	P32795	747 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	UGP1	P32861	499 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	CUE2	P36075	443 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	YKL023W	P36103	277 aa	Known RBP	3.56	□□□□□ -1.84
YAL004W	YAL004W	MNN2	P38069	597 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	PET100	P38958	111 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	END3	P39013	349 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	ECM1	P39715	212 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	MSS2	P40990	351 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	MIC19	P43594	170 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	STB2	P46679	850 aa		3.56	□□□□□ -1.84
YAL004W	YAL004W	GCD14	P46959	383 aa	Predicted RBP	3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms