RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A SDT1P53078 280 aa15.03■□□□□ -0
TRN1tP(UGG)A FHN1P53279 174 aa15.03■□□□□ -0
TRN1tP(UGG)A BNI4P53858 892 aa15.03■□□□□ -0
TRN1tP(UGG)A MUS81Q04149 632 aaPredicted RBP15.03■□□□□ -0
TRN1tP(UGG)A YHC1Q05900 231 aaKnown RBP15.03■□□□□ -0
TRN1tP(UGG)A GYP1Q08484 637 aa15.03■□□□□ -0
TRN1tP(UGG)A YPR022CQ12139 1133 aa15.03■□□□□ -0
TRN1tP(UGG)A YOL107WQ12239 342 aa15.03■□□□□ -0
TRN1tP(UGG)A RUP1Q12242 671 aa15.03■□□□□ -0
TRN1tP(UGG)A YKL018C-AQ3E7A7 99 aa15.03■□□□□ -0
TRN1tP(UGG)A ATP4P05626 244 aa15.02■□□□□ -0
TRN1tP(UGG)A TPK2P06245 380 aa15.02■□□□□ -0
TRN1tP(UGG)A GAL7P08431 366 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-LR1P0C2J4 438 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-FP0CX61 438 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-GR2P0CX62 438 aa15.02■□□□□ -0
TRN1tP(UGG)A GCD2P12754 651 aaPredicted RBP15.02■□□□□ -0
TRN1tP(UGG)A TY2A-CP25383 438 aa15.02■□□□□ -0
TRN1tP(UGG)A IDH2P28241 369 aaKnown RBP15.02■□□□□ -0
TRN1tP(UGG)A MAD2P40958 196 aa15.02■□□□□ -0
TRN1tP(UGG)A DUG1P43616 481 aaKnown RBP15.02■□□□□ -0
TRN1tP(UGG)A BIO3P50277 480 aa15.02■□□□□ -0
TRN1tP(UGG)A ESF2P53743 316 aaKnown RBP15.02■□□□□ -0
TRN1tP(UGG)A PRO2P54885 456 aaKnown RBP15.02■□□□□ -0
TRN1tP(UGG)A TY2A-DR2Q03483 438 aa15.02■□□□□ -0
TRN1tP(UGG)A YMR010WQ03687 405 aa15.02■□□□□ -0
TRN1tP(UGG)A DYN3Q04949 312 aa15.02■□□□□ -0
TRN1tP(UGG)A SNX3Q08826 162 aaKnown RBP15.02■□□□□ -0
TRN1tP(UGG)A NSL1Q12143 216 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-BQ12260 438 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-OR2Q12293 438 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-DR1Q12392 438 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-OR1Q12439 438 aa15.02■□□□□ -0
TRN1tP(UGG)A TY2A-DR3Q99303 438 aa15.02■□□□□ -0
TRN1tP(UGG)A PRI2P20457 528 aa15.01□□□□□ -0.01
TRN1tP(UGG)A SAN1P22470 610 aa15.01□□□□□ -0.01
TRN1tP(UGG)A CDC5P32562 705 aa15.01□□□□□ -0.01
TRN1tP(UGG)A SFA1P32771 386 aa15.01□□□□□ -0.01
TRN1tP(UGG)A BEM4P39011 633 aa15.01□□□□□ -0.01
TRN1tP(UGG)A GUS1P46655 708 aaKnown RBP RIP-Chip data15.01□□□□□ -0.01not detected
TRN1tP(UGG)A EFR3Q03653 782 aaKnown RBP15.01□□□□□ -0.01
TRN1tP(UGG)A BCP1Q06338 283 aa15.01□□□□□ -0.01
TRN1tP(UGG)A MCH5Q08777 521 aa15.01□□□□□ -0.01
TRN1tP(UGG)A NTO1Q12311 748 aa15.01□□□□□ -0.01
TRN1tP(UGG)A Q0010Q9ZZX9 128 aa15.01□□□□□ -0.01
TRN1tP(UGG)A MRP13P12686 339 aa15□□□□□ -0.01
TRN1tP(UGG)A PRO1P32264 428 aa15□□□□□ -0.01
TRN1tP(UGG)A HOG1P32485 435 aa15□□□□□ -0.01
TRN1tP(UGG)A SPO23P33757 523 aa15□□□□□ -0.01
TRN1tP(UGG)A GLG1P36143 616 aa15□□□□□ -0.01
TRN1tP(UGG)A MRPL17P36528 281 aa15□□□□□ -0.01
TRN1tP(UGG)A IAH1P41734 238 aa15□□□□□ -0.01
TRN1tP(UGG)A MUP1P50276 574 aa15□□□□□ -0.01
TRN1tP(UGG)A YLR456WQ06199 204 aa15□□□□□ -0.01
TRN1tP(UGG)A RRP40Q08285 240 aaKnown RBP15□□□□□ -0.01
TRN1tP(UGG)A MEF1P25039 761 aa14.99□□□□□ -0.01
TRN1tP(UGG)A CSM1P25651 190 aa14.99□□□□□ -0.01
TRN1tP(UGG)A SEC17P32602 292 aa14.99□□□□□ -0.01
TRN1tP(UGG)A UPF3P48412 387 aaKnown RBP14.99□□□□□ -0.01
TRN1tP(UGG)A HFA1P32874 2273 aa14.99□□□□□ -0.01
TRN1tP(UGG)A ATP6P00854 259 aa14.98□□□□□ -0.01
TRN1tP(UGG)A ARG3P05150 338 aa14.98□□□□□ -0.01
TRN1tP(UGG)A MSS116P15424 664 aaKnown RBP14.98□□□□□ -0.01
TRN1tP(UGG)A HOP1P20050 605 aa14.98□□□□□ -0.01
TRN1tP(UGG)A ASC1P38011 319 aaKnown RBP14.98□□□□□ -0.01
TRN1tP(UGG)A IMA5P40884 581 aa14.98□□□□□ -0.01
TRN1tP(UGG)A YGR250CP53316 781 aaKnown RBP14.98□□□□□ -0.01
TRN1tP(UGG)A NRM1P53718 249 aa14.98□□□□□ -0.01
TRN1tP(UGG)A HSP31Q04432 237 aa14.98□□□□□ -0.01
TRN1tP(UGG)A SWF1Q04629 336 aa14.98□□□□□ -0.01
TRN1tP(UGG)A RRP45Q05636 305 aaKnown RBP14.98□□□□□ -0.01
TRN1tP(UGG)A PDR8Q06149 701 aa14.98□□□□□ -0.01
TRN1tP(UGG)A REX4Q08237 289 aa14.98□□□□□ -0.01
TRN1tP(UGG)A GET4Q12125 312 aa14.98□□□□□ -0.01
TRN1tP(UGG)A YPR064WQ12492 139 aa14.98□□□□□ -0.01
TRN1tP(UGG)A PNO1Q99216 274 aaKnown RBP14.98□□□□□ -0.01
TRN1tP(UGG)A YOL087CQ99247 1116 aa14.98□□□□□ -0.01
TRN1tP(UGG)A SLH1P53327 1967 aaKnown RBP14.98□□□□□ -0.01
TRN1tP(UGG)A YHR112CP38716 378 aa14.97□□□□□ -0.01
TRN1tP(UGG)A FAA3P39002 694 aa14.97□□□□□ -0.01
TRN1tP(UGG)A ALG5P40350 334 aa14.97□□□□□ -0.01
TRN1tP(UGG)A CFD1P40558 293 aa14.97□□□□□ -0.01
TRN1tP(UGG)A RIM21P48565 533 aa14.97□□□□□ -0.01
TRN1tP(UGG)A RPM2Q02773 1202 aa14.97□□□□□ -0.01
TRN1tP(UGG)A RRN11Q04712 507 aa14.97□□□□□ -0.01
TRN1tP(UGG)A YIG1Q08956 461 aa14.97□□□□□ -0.01
TRN1tP(UGG)A LEU9Q12166 604 aaKnown RBP14.97□□□□□ -0.01
TRN1tP(UGG)A SKM1Q12469 655 aa14.97□□□□□ -0.01
TRN1tP(UGG)A SNF8Q12483 233 aa14.97□□□□□ -0.01
TRN1tP(UGG)A SLM5P25345 492 aaKnown RBP14.96□□□□□ -0.01
TRN1tP(UGG)A SYP1P25623 870 aaKnown RBP14.96□□□□□ -0.01
TRN1tP(UGG)A IST2P38250 946 aa14.96□□□□□ -0.01
TRN1tP(UGG)A PAC11P40960 533 aa14.96□□□□□ -0.01
TRN1tP(UGG)A PRM10P42946 383 aa14.96□□□□□ -0.01
TRN1tP(UGG)A ACL4Q03771 387 aa14.96□□□□□ -0.01
TRN1tP(UGG)A GGA1Q06336 557 aa14.96□□□□□ -0.01
TRN1tP(UGG)A IRC13Q08630 104 aa14.96□□□□□ -0.01
TRN1tP(UGG)A RPN6Q12377 434 aa14.96□□□□□ -0.01
TRN1tP(UGG)A RPS17AP02407 136 aaKnown RBP14.95□□□□□ -0.02
TRN1tP(UGG)A RPS17BP14127 136 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms