RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP16	YPL072W	EXO70	P19658	623 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	FUN19	P28003	413 aa	Predicted RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	VPH1	P32563	840 aa	Known RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	TFB1	P32776	642 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	YME1	P32795	747 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	SAS3	P34218	831 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	TCD2	P36101	447 aa	Known RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	PRE5	P40302	234 aa	Known RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	PET130	P47065	347 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	IMD4	P50094	524 aa	Known RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	MNP1	P53163	194 aa	Predicted RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	JJJ1	P53863	590 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	FIN1	Q03898	291 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	RQC1	Q05468	723 aa	Known RBP	2.65	□□□□□ -1.99
UBP16	YPL072W	SGS1	P35187	1447 aa		2.65	□□□□□ -1.99
UBP16	YPL072W	ART10	P18634	518 aa	Known RBP	2.64	□□□□□ -1.99
UBP16	YPL072W	YCR051W	P25631	222 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	ADK2	P26364	225 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	STB6	P36085	766 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	RRT2	P38332	387 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	LRP1	P38801	184 aa	Known RBP	2.64	□□□□□ -1.99
UBP16	YPL072W	APE4	P38821	490 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	CCT6	P39079	546 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	HXT14	P42833	540 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	YJL055W	P47044	245 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	BTN2	P53286	410 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	ERB1	Q04660	807 aa	Known RBP	2.64	□□□□□ -1.99
UBP16	YPL072W	AIM32	Q04689	311 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	MRD1	Q06106	887 aa	Known RBP	2.64	□□□□□ -1.99
UBP16	YPL072W	VTA1	Q06263	330 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	BSC6	Q08280	497 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	RLM1	Q12224	676 aa		2.64	□□□□□ -1.99
UBP16	YPL072W	RRP12	Q12754	1228 aa	Known RBP	2.64	□□□□□ -1.99
UBP16	YPL072W	SPT15	P13393	240 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	RPL3	P14126	387 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	SRV2	P17555	526 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	CLB1	P24868	471 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	YEL045C	P32616	141 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	MRE11	P32829	692 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	WBP1	P33767	430 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	PMT1	P33775	817 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	HCS1	P34243	683 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	GDI1	P39958	451 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
UBP16	YPL072W	ZIM17	P42844	174 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	ALK1	P43633	760 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	YGR250C	P53316	781 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	GYL1	Q04322	720 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	PHO92	Q06390	306 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	YOR387C	Q08910	206 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	SEC39	Q12745	709 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	YOL159C-A	Q3E769	90 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	AFI1	Q99222	893 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
UBP16	YPL072W	MNE1	P24720	663 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	MDL1	P33310	695 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	SHP1	P34223	423 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	DUG2	P38149	878 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	ELP2	P42935	788 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	DLD2	P46681	530 aa	Known RBP	2.63	□□□□□ -1.99
UBP16	YPL072W	GWT1	P47026	490 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	GPI1	P53306	609 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	YDR131C	Q03899	556 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	PDS5	Q04264	1277 aa		2.63	□□□□□ -1.99
UBP16	YPL072W	MRP13	P12686	339 aa		2.62	□□□□□ -1.99
UBP16	YPL072W	CPR1	P14832	162 aa	Known RBP	2.62	□□□□□ -1.99
UBP16	YPL072W	RFS1	P38234	210 aa	Known RBP	2.62	□□□□□ -1.99
UBP16	YPL072W	MSR1	P38714	643 aa		2.62	□□□□□ -1.99
UBP16	YPL072W	TIF4631	P39935	952 aa	Known RBP	2.62	□□□□□ -1.99
UBP16	YPL072W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.62	□□□□□ -1.99	not detected
UBP16	YPL072W	TOF2	Q02208	771 aa		2.62	□□□□□ -1.99
UBP16	YPL072W	KAP120	Q02932	1032 aa		2.62	□□□□□ -1.99
UBP16	YPL072W	PAL1	Q05518	499 aa	Known RBP	2.62	□□□□□ -1.99
UBP16	YPL072W	RBS1	Q05672	457 aa	Known RBP	2.62	□□□□□ -1.99
UBP16	YPL072W	THP1	Q08231	455 aa		2.62	□□□□□ -1.99
UBP16	YPL072W	PRD1	P25375	712 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	NAM9	P27929	486 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	DEG1	P31115	442 aa	Known RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	SEC66	P33754	206 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	BNA4	P38169	460 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	TCM62	P38228	572 aa	Known RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	NTC20	P38302	140 aa	Predicted RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	LCB2	P40970	561 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	ATP22	P50273	684 aa	Predicted RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	SDT1	P53078	280 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	CAF130	P53280	1122 aa	Predicted RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	RRN11	Q04712	507 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	ROY1	Q04847	553 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	COQ9	Q05779	260 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	CFT2	Q12102	859 aa	Predicted RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	ERV2	Q12284	196 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	PAR32	Q12515	295 aa	Known RBP	2.61	□□□□□ -1.99
UBP16	YPL072W	YDL007C-A	Q2V2Q0	85 aa		2.61	□□□□□ -1.99
UBP16	YPL072W	HIP1	P06775	603 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	CPR2	P23285	205 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	YIM1	P28625	365 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	MRP4	P32902	394 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	NIP100	P33420	868 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	MSN2	P33748	704 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms