RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	JLP1	Q12358	412 aa		9.11	□□□□□ -0.95
MSB4	YOL112W	SAS5	Q99314	248 aa		9.11	□□□□□ -0.95
MSB4	YOL112W	HTA2	P04912	132 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-LR1	P0C2J4	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-F	P0CX61	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-GR2	P0CX62	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-C	P25383	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	ERG1	P32476	496 aa	Known RBP	9.1	□□□□□ -0.95
MSB4	YOL112W	ATO2	P32907	282 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	MAD2	P40958	196 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	IBA57	P47158	497 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	GTO1	P48239	356 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-DR2	Q03483	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	ECM11	Q04110	302 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	CDA1	Q06702	301 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	REX4	Q08237	289 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	SGT1	Q08446	395 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	GYP1	Q08484	637 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	DIA2	Q08496	732 aa	Predicted RBP	9.1	□□□□□ -0.95
MSB4	YOL112W	UAF30	Q08747	228 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	GUP2	Q08929	609 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	MMT2	Q08970	484 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	YLL054C	Q12244	843 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-B	Q12260	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-OR2	Q12293	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-DR1	Q12392	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-OR1	Q12439	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	YPR064W	Q12492	139 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	SEC39	Q12745	709 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	TY2A-DR3	Q99303	438 aa		9.1	□□□□□ -0.95
MSB4	YOL112W	FAS1	P07149	2051 aa	Known RBP	9.1	□□□□□ -0.95
MSB4	YOL112W	GCD2	P12754	651 aa	Predicted RBP	9.09	□□□□□ -0.95
MSB4	YOL112W	PRP4	P20053	465 aa	Known RBP	9.09	□□□□□ -0.95
MSB4	YOL112W	SPS22	P25380	463 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	RPT5	P33297	434 aa	Known RBP	9.09	□□□□□ -0.95
MSB4	YOL112W	PET112	P33893	541 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	TAF14	P35189	244 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	YHR112C	P38716	378 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	PAC11	P40960	533 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	PRM10	P42946	383 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	SDT1	P53078	280 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	ROG1	P53118	685 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	IDP3	P53982	420 aa	Known RBP	9.09	□□□□□ -0.95
MSB4	YOL112W	UBP2	Q01476	1272 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	SED5	Q01590	340 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	PDR8	Q06149	701 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	YVC1	Q12324	675 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	YKL018C-A	Q3E7A7	99 aa		9.09	□□□□□ -0.95
MSB4	YOL112W	PRT1	P06103	763 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	HES1	P35843	434 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	VPS21	P36017	210 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	FRE2	P36033	711 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	ASC1	P38011	319 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	COS111	P38308	924 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	NEO1	P40527	1151 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	MUP1	P50276	574 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	IMA1	P53051	589 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	YGR250C	P53316	781 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	PRO2	P54885	456 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	SWF1	Q04629	336 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	BOP2	Q06150	570 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	GIC2	Q06648	383 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	YLR413W	Q06689	675 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	Q0010	Q9ZZX9	128 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	BCY1	P07278	416 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	RIP1	P08067	215 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	SLM5	P25345	492 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	CHA1	P25379	360 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	AAR2	P32357	355 aa	Predicted RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	MVD1	P32377	396 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	SRB5	P32585	307 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	SUI1	P32911	108 aa	Known RBP	9.08	□□□□□ -0.96
MSB4	YOL112W	SPO23	P33757	523 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	YIL086C	P40503	102 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	TRM9	P49957	279 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	USE1	P53146	245 aa		9.08	□□□□□ -0.96
MSB4	YOL112W	ARG81	P05085	880 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	MGR1	P25573	417 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	SYP1	P25623	870 aa	Known RBP	9.07	□□□□□ -0.96
MSB4	YOL112W	TOA1	P32773	286 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	YRO2	P38079	344 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	FTH1	P38310	465 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	FRT2	P39734	528 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	AYR1	P40471	297 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	RPL10	P41805	221 aa	Known RBP	9.07	□□□□□ -0.96
MSB4	YOL112W	ALR2	P43553	858 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	IRC15	Q02733	499 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	MSC1	Q03104	513 aa		9.07	□□□□□ -0.96
MSB4	YOL112W	RRP36	Q12481	300 aa	Predicted RBP	9.07	□□□□□ -0.96
MSB4	YOL112W	RAS2	P01120	322 aa	Known RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	RPS17A	P02407	136 aa	Known RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	ARD1	P07347	238 aa	Predicted RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	RPS17B	P14127	136 aa	Known RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	PHO81	P17442	1178 aa		9.06	□□□□□ -0.96
MSB4	YOL112W	PRI2	P20457	528 aa		9.06	□□□□□ -0.96
MSB4	YOL112W	BNA4	P38169	460 aa		9.06	□□□□□ -0.96
MSB4	YOL112W	MTR3	P48240	250 aa	Predicted RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	UPF3	P48412	387 aa	Known RBP	9.06	□□□□□ -0.96
MSB4	YOL112W	RAD17	P48581	401 aa		9.06	□□□□□ -0.96
MSB4	YOL112W	YHC1	Q05900	231 aa	Known RBP	9.06	□□□□□ -0.96

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms