RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C LYS5P50113 272 aa3.29□□□□□ -1.88
TOP1YOL006C YGR067CP53243 804 aa3.29□□□□□ -1.88
TOP1YOL006C ENT5Q03769 411 aaKnown RBP3.29□□□□□ -1.88
TOP1YOL006C IPK1Q06667 281 aa3.29□□□□□ -1.88
TOP1YOL006C ATG31Q12421 196 aa3.29□□□□□ -1.88
TOP1YOL006C YDR461C-AQ2V2P7 80 aa3.29□□□□□ -1.88
TOP1YOL006C PMA1P05030 918 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C THR4P16120 514 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C ALG1P16661 449 aa3.28□□□□□ -1.88
TOP1YOL006C YCP4P25349 247 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C PUP3P25451 205 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C IMG1P25626 169 aa3.28□□□□□ -1.88
TOP1YOL006C ICL1P28240 557 aaPredicted RBP3.28□□□□□ -1.88
TOP1YOL006C CWP1P28319 239 aa3.28□□□□□ -1.88
TOP1YOL006C FRE1P32791 686 aa3.28□□□□□ -1.88
TOP1YOL006C MIA40P36046 403 aa3.28□□□□□ -1.88
TOP1YOL006C NTR2P36118 322 aaPredicted RBP3.28□□□□□ -1.88
TOP1YOL006C IML3P38265 245 aa3.28□□□□□ -1.88
TOP1YOL006C IMD2P38697 523 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C OSH7P38755 437 aa3.28□□□□□ -1.88
TOP1YOL006C LOH1P47055 219 aa3.28□□□□□ -1.88
TOP1YOL006C RSM24Q03976 319 aa3.28□□□□□ -1.88
TOP1YOL006C COX20Q04935 205 aa3.28□□□□□ -1.88
TOP1YOL006C YFT2Q06676 274 aa3.28□□□□□ -1.88
TOP1YOL006C MRPL35Q06678 367 aa3.28□□□□□ -1.88
TOP1YOL006C WHI4Q07655 649 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
TOP1YOL006C TDH2P00358 332 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C TDH3P00359 332 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
TOP1YOL006C YMR085WP0CF18 432 aa3.28□□□□□ -1.88
TOP1YOL006C GSY2P27472 705 aa3.28□□□□□ -1.88
TOP1YOL006C PSO2P30620 661 aa3.28□□□□□ -1.88
TOP1YOL006C YPS1P32329 569 aa3.28□□□□□ -1.88
TOP1YOL006C ECM25P32525 599 aa3.28□□□□□ -1.88
TOP1YOL006C RPC25P35718 212 aa3.28□□□□□ -1.88
TOP1YOL006C RTT107P38850 1070 aa3.28□□□□□ -1.88
TOP1YOL006C ALP1P38971 573 aa3.28□□□□□ -1.88
TOP1YOL006C MSS4P38994 779 aa3.28□□□□□ -1.88
TOP1YOL006C CDC40P40968 455 aaPredicted RBP3.28□□□□□ -1.88
TOP1YOL006C GLG2P47011 380 aa3.28□□□□□ -1.88
TOP1YOL006C DPB11P47027 764 aaPredicted RBP3.28□□□□□ -1.88
TOP1YOL006C YGR127WP53275 312 aa3.28□□□□□ -1.88
TOP1YOL006C SPC98P53540 846 aa3.28□□□□□ -1.88
TOP1YOL006C YMR310CQ04867 317 aaPredicted RBP3.28□□□□□ -1.88
TOP1YOL006C YLR283WQ05867 314 aa3.28□□□□□ -1.88
TOP1YOL006C TLG2Q08144 397 aa3.28□□□□□ -1.88
TOP1YOL006C RRP12Q12754 1228 aaKnown RBP3.28□□□□□ -1.88
TOP1YOL006C YER175W-AQ8TGU4 54 aa3.28□□□□□ -1.88
TOP1YOL006C POL30P15873 258 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C COQ1P18900 473 aa3.27□□□□□ -1.89
TOP1YOL006C HXT2P23585 541 aa3.27□□□□□ -1.89
TOP1YOL006C YSP3P25036 478 aa3.27□□□□□ -1.89
TOP1YOL006C EMP70P32802 667 aa3.27□□□□□ -1.89
TOP1YOL006C AIM29P36154 155 aa3.27□□□□□ -1.89
TOP1YOL006C ALG14P38242 237 aa3.27□□□□□ -1.89
TOP1YOL006C ARO9P38840 513 aaPredicted RBP3.27□□□□□ -1.89
TOP1YOL006C EGD2P38879 174 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C RIX1P38883 763 aaPredicted RBP3.27□□□□□ -1.89
TOP1YOL006C PLB1P39105 664 aa3.27□□□□□ -1.89
TOP1YOL006C CEM1P39525 442 aa3.27□□□□□ -1.89
TOP1YOL006C UIP3P39547 235 aa3.27□□□□□ -1.89
TOP1YOL006C OYE3P41816 400 aaPredicted RBP3.27□□□□□ -1.89
TOP1YOL006C YJL118WP47022 219 aa3.27□□□□□ -1.89
TOP1YOL006C LIF1P53150 421 aa3.27□□□□□ -1.89
TOP1YOL006C ZPR1P53303 486 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C CUS2P53830 285 aaPredicted RBP3.27□□□□□ -1.89
TOP1YOL006C CUZ1P53899 274 aa3.27□□□□□ -1.89
TOP1YOL006C MYO5Q04439 1219 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C PDR8Q06149 701 aa3.27□□□□□ -1.89
TOP1YOL006C GEP3Q08622 556 aa3.27□□□□□ -1.89
TOP1YOL006C SRO7Q12038 1033 aa3.27□□□□□ -1.89
TOP1YOL006C YVC1Q12324 675 aa3.27□□□□□ -1.89
TOP1YOL006C SWM1Q12379 170 aa3.27□□□□□ -1.89
TOP1YOL006C RAD3P06839 778 aa3.27□□□□□ -1.89
TOP1YOL006C MATALPHA1P0CY06 175 aa3.27□□□□□ -1.89
TOP1YOL006C HMLALPHA1P0CY07 175 aa3.27□□□□□ -1.89
TOP1YOL006C MAS1P10507 462 aa3.27□□□□□ -1.89
TOP1YOL006C NHP6BP11633 99 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C FEN2P25621 512 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C PPA2P28239 310 aa3.27□□□□□ -1.89
TOP1YOL006C PRR1P28708 518 aa3.27□□□□□ -1.89
TOP1YOL006C AIM26P32858 118 aa3.27□□□□□ -1.89
TOP1YOL006C RSM22P36056 628 aa3.27□□□□□ -1.89
TOP1YOL006C AAP1P37898 856 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C SPP381P38282 291 aaPredicted RBP3.27□□□□□ -1.89
TOP1YOL006C SDH8P38345 138 aa3.27□□□□□ -1.89
TOP1YOL006C PCA1P38360 1216 aa3.27□□□□□ -1.89
TOP1YOL006C LNP1P38878 278 aa3.27□□□□□ -1.89
TOP1YOL006C SUR2P38992 349 aa3.27□□□□□ -1.89
TOP1YOL006C YER130CP39959 443 aa3.27□□□□□ -1.89
TOP1YOL006C RFC4P40339 323 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C YRB1P41920 201 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C VPS73P53142 486 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C TEX1P53851 422 aaKnown RBP3.27□□□□□ -1.89
TOP1YOL006C TAF12Q03761 539 aa3.27□□□□□ -1.89
TOP1YOL006C SSY1Q03770 852 aa3.27□□□□□ -1.89
TOP1YOL006C COQ9Q05779 260 aa3.27□□□□□ -1.89
TOP1YOL006C PIG1Q06216 648 aa3.27□□□□□ -1.89
TOP1YOL006C INP53Q12271 1107 aa3.27□□□□□ -1.89
TOP1YOL006C PAA1Q12447 191 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms