RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.97	□□□□□ -1.29	not detected
MSB3	YNL293W	TPK1	P06244	397 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	FUM1	P08417	488 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	CBS2	P14905	389 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	TOD6	P34219	525 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	MAP2	P38174	421 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	MNL1	P38888	796 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	SCC4	P40090	624 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	ATM1	P40416	690 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	THI6	P41835	540 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	DAK2	P43550	591 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	MTQ1	P53944	314 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	STP1	Q00947	519 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	MUS81	Q04149	632 aa	Predicted RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	MFB1	Q04922	465 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	REH1	Q06709	432 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	RSB1	Q08417	382 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	MDM32	Q12171	622 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	MED1	Q12321	566 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	URA6	P15700	204 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	GPI10	P30777	616 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	PRP21	P32524	280 aa	Predicted RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	SHP1	P34223	423 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	RRP4	P38792	359 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	VPS45	P38932	577 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	TMA108	P40462	946 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	CFD1	P40558	293 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	SKP2	P42843	763 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	TAD1	P53065	400 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	HCH1	P53834	153 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	HDA1	P53973	706 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	ERV25	P54837	211 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	YMR099C	Q03161	297 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	MRPS17	Q03246	237 aa	Predicted RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	RMT2	Q03305	412 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	GIM5	Q04493	163 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	YPS7	Q06325	596 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	YPR147C	Q06522	304 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	THI20	Q08224	551 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	YOL075C	Q08234	1294 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	FAL1	Q12099	399 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	RTK1	Q12100	620 aa	Predicted RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	YAH1	Q12184	172 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	YDL206W	Q12424	762 aa		6.97	□□□□□ -1.29
MSB3	YNL293W	PNO1	Q99216	274 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	MIP1	P15801	1254 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	HEM15	P16622	393 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	AAT2	P23542	418 aa	Known RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	MIR1	P23641	311 aa	Known RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	IMP2'	P32351	346 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	TCA17	P32613	152 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	FTH1	P38310	465 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	YBR259W	P38338	688 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	IPI1	P38803	334 aa	Predicted RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	MLH1	P38920	769 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	NPR2	P39923	615 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	PCL6	P40038	420 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	BST1	P43571	1029 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	MPS3	P47069	682 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	COS12	P53053	380 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	NSA1	P53136	463 aa	Predicted RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	YBP2	P53169	641 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	SPC98	P53540	846 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	ALG12	P53730	551 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	BRE5	P53741	515 aa	Known RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	RPL22B	P56628	122 aa	Known RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	YMR265C	Q03508	461 aa	Known RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	MRX10	Q05648	414 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	MDM30	Q05930	598 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	CYK3	Q07533	885 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	SPO75	Q07798	868 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	ATX2	Q12067	313 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	NSL1	Q12143	216 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	RRP42	Q12277	265 aa	Predicted RBP	6.96	□□□□□ -1.3
MSB3	YNL293W	PSY3	Q12318	242 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	HRT3	Q12347	344 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	MED11	Q99278	115 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	ISN1	Q99312	450 aa		6.96	□□□□□ -1.3
MSB3	YNL293W	RPP2A	P05319	106 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	RAD7	P06779	565 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	MAS2	P11914	482 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	YPK1	P12688	680 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	UGA1	P17649	471 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	CDC50	P25656	391 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	ABD1	P32783	436 aa	Predicted RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	SOF1	P33750	489 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	LST4	P34239	828 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	SPC34	P36131	295 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	BET3	P36149	193 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	MRPL15	P36523	253 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	NCL1	P38205	684 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	MMS21	P38632	267 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	YHK8	P38776	514 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	BIG1	P38813	335 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	GIP4	P39732	760 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	MIT1	P40002	666 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	RPT4	P53549	437 aa	Known RBP	6.95	□□□□□ -1.3
MSB3	YNL293W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
MSB3	YNL293W	PRM15	Q03262	622 aa		6.95	□□□□□ -1.3
MSB3	YNL293W	EFR3	Q03653	782 aa	Known RBP	6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms