RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C RPS17BP14127 136 aaKnown RBP11.96□□□□□ -0.5
BDF1YLR399C MRPL3P36516 390 aa11.96□□□□□ -0.5
BDF1YLR399C FTH1P38310 465 aa11.96□□□□□ -0.5
BDF1YLR399C HXT9P40885 567 aa11.96□□□□□ -0.5
BDF1YLR399C SKP2P42843 763 aa11.96□□□□□ -0.5
BDF1YLR399C BOL2P53082 120 aa11.96□□□□□ -0.5
BDF1YLR399C NOP13P53883 403 aaKnown RBP RIP-Chip data11.96□□□□□ -0.5not detected
BDF1YLR399C YPL068CQ02749 293 aa11.96□□□□□ -0.5
BDF1YLR399C YMD8Q03697 442 aa11.96□□□□□ -0.5
BDF1YLR399C DBP9Q06218 594 aaKnown RBP11.96□□□□□ -0.5
BDF1YLR399C MLH3Q12083 715 aa11.96□□□□□ -0.5
BDF1YLR399C RAD52P06778 471 aaKnown RBP11.95□□□□□ -0.5
BDF1YLR399C GUK1P15454 187 aaKnown RBP11.95□□□□□ -0.5
BDF1YLR399C AAT2P23542 418 aaKnown RBP11.95□□□□□ -0.5
BDF1YLR399C PCS60P38137 543 aaKnown RBP RIP-Chip data11.95□□□□□ -0.5not detected
BDF1YLR399C VAB2P40003 282 aa11.95□□□□□ -0.5
BDF1YLR399C SLX8P40072 274 aa11.95□□□□□ -0.5
BDF1YLR399C NDE1P40215 560 aa11.95□□□□□ -0.5
BDF1YLR399C SSN8P47821 323 aa11.95□□□□□ -0.5
BDF1YLR399C TIF35Q04067 274 aaKnown RBP11.95□□□□□ -0.5
BDF1YLR399C ARO10Q06408 635 aa11.95□□□□□ -0.5
BDF1YLR399C SIR3P06701 978 aa11.95□□□□□ -0.5
BDF1YLR399C RPS4AP0CX35 261 aaKnown RBP11.95□□□□□ -0.5
BDF1YLR399C RPS4BP0CX36 261 aaKnown RBP11.95□□□□□ -0.5
BDF1YLR399C DAP2P18962 818 aa11.95□□□□□ -0.5
BDF1YLR399C SSO1P32867 290 aa11.95□□□□□ -0.5
BDF1YLR399C VRG4P40107 337 aa11.95□□□□□ -0.5
BDF1YLR399C MDV1P47025 714 aa11.95□□□□□ -0.5
BDF1YLR399C ATH1P48016 1211 aa11.95□□□□□ -0.5
BDF1YLR399C EMI1Q04406 187 aa11.95□□□□□ -0.5
BDF1YLR399C PHO92Q06390 306 aa11.95□□□□□ -0.5
BDF1YLR399C PER1P25625 357 aa11.94□□□□□ -0.5
BDF1YLR399C ATP3P38077 311 aaKnown RBP11.94□□□□□ -0.5
BDF1YLR399C YRO2P38079 344 aa11.94□□□□□ -0.5
BDF1YLR399C STP2P38704 541 aa11.94□□□□□ -0.5
BDF1YLR399C HAT2P39984 401 aa11.94□□□□□ -0.5
BDF1YLR399C FKH2P41813 862 aa11.94□□□□□ -0.5
BDF1YLR399C GOT1Q03554 138 aa11.94□□□□□ -0.5
BDF1YLR399C SPO20Q04359 397 aa11.94□□□□□ -0.5
BDF1YLR399C SUS1Q6WNK7 96 aa11.94□□□□□ -0.5
BDF1YLR399C HTA2P04912 132 aa11.93□□□□□ -0.5
BDF1YLR399C CNB1P25296 175 aa11.93□□□□□ -0.5
BDF1YLR399C CPR3P25719 182 aa11.93□□□□□ -0.5
BDF1YLR399C CAM1P29547 415 aaKnown RBP11.93□□□□□ -0.5
BDF1YLR399C IXR1P33417 597 aa11.93□□□□□ -0.5
BDF1YLR399C MCM7P38132 845 aa11.93□□□□□ -0.5
BDF1YLR399C YHR033WP38690 423 aa11.93□□□□□ -0.5
BDF1YLR399C YEL028WP39989 153 aa11.93□□□□□ -0.5
BDF1YLR399C YFR018CP43599 363 aa11.93□□□□□ -0.5
BDF1YLR399C MAL11P53048 616 aa11.93□□□□□ -0.5
BDF1YLR399C NPL3Q01560 414 aaKnown RBP RIP-Chip data11.93□□□□□ -0.5not detected
BDF1YLR399C NHP10Q03435 203 aa11.93□□□□□ -0.5
BDF1YLR399C RPN9Q04062 393 aaKnown RBP11.93□□□□□ -0.5
BDF1YLR399C UBX5Q06682 500 aa11.93□□□□□ -0.5
BDF1YLR399C MAS1P10507 462 aa11.93□□□□□ -0.5
BDF1YLR399C BAR1P12630 587 aa11.93□□□□□ -0.5
BDF1YLR399C RAD27P26793 382 aa11.93□□□□□ -0.5
BDF1YLR399C RSP5P39940 809 aaKnown RBP11.93□□□□□ -0.5
BDF1YLR399C YER186CP40101 306 aa11.93□□□□□ -0.5
BDF1YLR399C ESL1P40456 1118 aa11.93□□□□□ -0.5
BDF1YLR399C PEX31P53203 462 aa11.93□□□□□ -0.5
BDF1YLR399C TIM13P53299 105 aa11.93□□□□□ -0.5
BDF1YLR399C MTD1Q02046 320 aaKnown RBP11.93□□□□□ -0.5
BDF1YLR399C PMT7Q06644 662 aa11.93□□□□□ -0.5
BDF1YLR399C RRG7Q08774 242 aaPredicted RBP11.93□□□□□ -0.5
BDF1YLR399C LDB19Q12502 818 aa11.93□□□□□ -0.5
BDF1YLR399C RAS2P01120 322 aaKnown RBP11.92□□□□□ -0.5
BDF1YLR399C FLP1P03870 423 aa11.92□□□□□ -0.5
BDF1YLR399C CDC4P07834 779 aa11.92□□□□□ -0.5
BDF1YLR399C SPS1P08458 490 aa11.92□□□□□ -0.5
BDF1YLR399C FBP1P09201 348 aa11.92□□□□□ -0.5
BDF1YLR399C YGL041W-AP0C5N3 154 aa11.92□□□□□ -0.5
BDF1YLR399C BIG1P38813 335 aa11.92□□□□□ -0.5
BDF1YLR399C ACO2P39533 789 aa11.92□□□□□ -0.5
BDF1YLR399C AFG3P39925 761 aa11.92□□□□□ -0.5
BDF1YLR399C YFL066CP43538 392 aa11.92□□□□□ -0.5
BDF1YLR399C YNL181WP53878 407 aa11.92□□□□□ -0.5
BDF1YLR399C CWC21Q03375 135 aaKnown RBP11.92□□□□□ -0.5
BDF1YLR399C ARA2Q04212 335 aa11.92□□□□□ -0.5
BDF1YLR399C BLS1Q06071 122 aa11.92□□□□□ -0.5
BDF1YLR399C YPR172WQ06608 200 aa11.92□□□□□ -0.5
BDF1YLR399C MFG1Q07684 458 aa11.92□□□□□ -0.5
BDF1YLR399C MRH1Q12117 320 aaPredicted RBP11.92□□□□□ -0.5
BDF1YLR399C AHA1Q12449 350 aaKnown RBP11.92□□□□□ -0.5
BDF1YLR399C YGL194C-AQ2V2P6 80 aa11.92□□□□□ -0.5
BDF1YLR399C YOR019WQ99248 730 aa11.92□□□□□ -0.5
BDF1YLR399C COX5AP00424 153 aa11.91□□□□□ -0.5
BDF1YLR399C TKL1P23254 680 aaKnown RBP11.91□□□□□ -0.5
BDF1YLR399C PMT2P31382 759 aa11.91□□□□□ -0.5
BDF1YLR399C YKR051WP36142 418 aa11.91□□□□□ -0.5
BDF1YLR399C MBA1P38300 278 aa11.91□□□□□ -0.5
BDF1YLR399C ARP1P38696 384 aa11.91□□□□□ -0.5
BDF1YLR399C GIC1P38785 314 aa11.91□□□□□ -0.5
BDF1YLR399C YJL218WP40892 196 aaKnown RBP11.91□□□□□ -0.5
BDF1YLR399C ECM27P47144 725 aa11.91□□□□□ -0.5
BDF1YLR399C GTO1P48239 356 aa11.91□□□□□ -0.5
BDF1YLR399C JAC1P53193 184 aa11.91□□□□□ -0.5
BDF1YLR399C SIW14P53965 281 aa11.91□□□□□ -0.5
BDF1YLR399C RRN5Q02983 363 aa11.91□□□□□ -0.5
BDF1YLR399C NSE5Q03718 556 aa11.91□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms